RNA–Protein interactions for RNA: ENST00000488846.1

SMKR1-202, Transcript of small lysine rich protein 1, humanhuman

TSL 3

Gene SMKR1, Length 424 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1-202ENST00000488846 BOLA2Q9H3K6 86 aa10.79□□□□□ -0.68
SMKR1-202ENST00000488846 OSBPL3Q9H4L5 887 aa10.79□□□□□ -0.68
SMKR1-202ENST00000488846 PAG1Q9NWQ8 432 aa10.79□□□□□ -0.68
SMKR1-202ENST00000488846 RAI14Q9P0K7 980 aa10.79□□□□□ -0.68
SMKR1-202ENST00000488846 CNTNAP1P78357 1384 aa10.78□□□□□ -0.68
SMKR1-202ENST00000488846 CLRN2A0PK11 232 aa10.78□□□□□ -0.68
SMKR1-202ENST00000488846 ERC2O15083 957 aa10.78□□□□□ -0.68
SMKR1-202ENST00000488846 GLRX3O76003 335 aaKnown RBP10.78□□□□□ -0.68
SMKR1-202ENST00000488846 PDE1AP54750 535 aa10.78□□□□□ -0.68
SMKR1-202ENST00000488846 RHBDL3P58872 404 aa10.78□□□□□ -0.68
SMKR1-202ENST00000488846 MAP3K12Q12852 859 aa10.78□□□□□ -0.68
SMKR1-202ENST00000488846 TNFAIP1Q13829 316 aa10.78□□□□□ -0.68
SMKR1-202ENST00000488846 NAA16Q6N069 864 aaPredicted RBP10.78□□□□□ -0.68
SMKR1-202ENST00000488846 DLK2Q6UY11 383 aa10.78□□□□□ -0.68
SMKR1-202ENST00000488846 EDC3Q96F86 508 aaKnown RBP10.78□□□□□ -0.68
SMKR1-202ENST00000488846 TEPSINQ96N21 525 aa10.78□□□□□ -0.68
SMKR1-202ENST00000488846 IDI2Q9BXS1 227 aa10.78□□□□□ -0.68
SMKR1-202ENST00000488846 LNPKQ9C0E8 428 aa10.78□□□□□ -0.68
SMKR1-202ENST00000488846 DEFB129Q9H1M3 183 aa10.78□□□□□ -0.68
SMKR1-202ENST00000488846 CREBZFQ9NS37 354 aa10.78□□□□□ -0.68
SMKR1-202ENST00000488846 ZBTB47Q9UFB7 747 aaPredicted RBP10.78□□□□□ -0.68
SMKR1-202ENST00000488846 RPAP1Q9BWH6 1393 aaPredicted RBP10.77□□□□□ -0.68
SMKR1-202ENST00000488846 TCRBV5S4A2TA0A5A2 114 aa10.77□□□□□ -0.69
SMKR1-202ENST00000488846 TMEM88BA6NKF7 163 aa10.77□□□□□ -0.69
SMKR1-202ENST00000488846 GOLIM4O00461 696 aa10.77□□□□□ -0.69
SMKR1-202ENST00000488846 IDH1O75874 414 aaKnown RBP10.77□□□□□ -0.69
SMKR1-202ENST00000488846 BTDP43251 543 aa10.77□□□□□ -0.69
SMKR1-202ENST00000488846 RASA3Q14644 834 aa10.77□□□□□ -0.69
SMKR1-202ENST00000488846 TSHZ3Q63HK5 1081 aa10.77□□□□□ -0.69
SMKR1-202ENST00000488846 B4GALNT3Q6L9W6 998 aa10.77□□□□□ -0.69
SMKR1-202ENST00000488846 ADGRA1Q86SQ6 560 aa10.77□□□□□ -0.69
SMKR1-202ENST00000488846 TICAM2Q86XR7 235 aa10.77□□□□□ -0.69
SMKR1-202ENST00000488846 PLEKHM2Q8IWE5 1019 aa10.77□□□□□ -0.69
SMKR1-202ENST00000488846 CDCA5Q96FF9 252 aa10.77□□□□□ -0.69
SMKR1-202ENST00000488846 DNAJC2Q99543 621 aaKnown RBP10.77□□□□□ -0.69
SMKR1-202ENST00000488846 FAM198AQ9UFP1 575 aa10.77□□□□□ -0.69
SMKR1-202ENST00000488846 WDHD1O75717 1129 aaPredicted RBP10.76□□□□□ -0.69
SMKR1-202ENST00000488846 CELF2O95319 508 aaKnown RBP10.76□□□□□ -0.69
SMKR1-202ENST00000488846 PDE6AP16499 860 aa10.76□□□□□ -0.69
SMKR1-202ENST00000488846 FKBP1BP68106 108 aa10.76□□□□□ -0.69
SMKR1-202ENST00000488846 UBE3CQ15386 1083 aa10.76□□□□□ -0.69
SMKR1-202ENST00000488846 SLC9C2Q5TAH2 1124 aa10.76□□□□□ -0.69
SMKR1-202ENST00000488846 CERS3Q8IU89 383 aa10.76□□□□□ -0.69
SMKR1-202ENST00000488846 MAGEB6Q8N7X4 407 aa10.76□□□□□ -0.69
SMKR1-202ENST00000488846 KBTBD3Q8NAB2 608 aa10.76□□□□□ -0.69
SMKR1-202ENST00000488846 HHIPL1Q96JK4 782 aa10.76□□□□□ -0.69
SMKR1-202ENST00000488846 VEZTQ9HBM0 779 aa10.76□□□□□ -0.69
SMKR1-202ENST00000488846 USP40Q9NVE5 1235 aa10.76□□□□□ -0.69
SMKR1-202ENST00000488846 SCAF8Q9UPN6 1271 aaKnown RBP10.76□□□□□ -0.69
SMKR1-202ENST00000488846 TLL2Q9Y6L7 1015 aa10.76□□□□□ -0.69
SMKR1-202ENST00000488846 SSC5DA1L4H1 1573 aa10.76□□□□□ -0.69
SMKR1-202ENST00000488846 COL2A1P02458 1487 aaPredicted RBP10.75□□□□□ -0.69
SMKR1-202ENST00000488846 PCNTO95613 3336 aa10.75□□□□□ -0.69
SMKR1-202ENST00000488846 RASSF10A6NK89 507 aa10.75□□□□□ -0.69
SMKR1-202ENST00000488846 TCP10L2B9ZVM9 353 aa10.75□□□□□ -0.69
SMKR1-202ENST00000488846 ENTPD3O75355 529 aa10.75□□□□□ -0.69
SMKR1-202ENST00000488846 PLCG2P16885 1265 aa10.75□□□□□ -0.69
SMKR1-202ENST00000488846 CYP7A1P22680 504 aa10.75□□□□□ -0.69
SMKR1-202ENST00000488846 PDE4AP27815 886 aa10.75□□□□□ -0.69
SMKR1-202ENST00000488846 ADD2P35612 726 aa10.75□□□□□ -0.69
SMKR1-202ENST00000488846 TNNI2P48788 182 aa10.75□□□□□ -0.69
SMKR1-202ENST00000488846 NFIAQ12857 509 aa10.75□□□□□ -0.69
SMKR1-202ENST00000488846 MAP3K11Q16584 847 aa10.75□□□□□ -0.69
SMKR1-202ENST00000488846 CENPQQ7L2Z9 268 aaPredicted RBP10.75□□□□□ -0.69
SMKR1-202ENST00000488846 SAPCD2Q86UD0 394 aa10.75□□□□□ -0.69
SMKR1-202ENST00000488846 DNAJC5GQ8N7S2 189 aa10.75□□□□□ -0.69
SMKR1-202ENST00000488846 FAM151AQ8WW52 585 aa10.75□□□□□ -0.69
SMKR1-202ENST00000488846 RIOK1Q9BRS2 568 aaKnown RBP10.75□□□□□ -0.69
SMKR1-202ENST00000488846 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.75□□□□□ -0.69
SMKR1-202ENST00000488846 BCL11AQ9H165 835 aa10.75□□□□□ -0.69
SMKR1-202ENST00000488846 TMOD2Q9NZR1 351 aa10.75□□□□□ -0.69
SMKR1-202ENST00000488846 PAPPA2Q9BXP8 1791 aa10.75□□□□□ -0.69
SMKR1-202ENST00000488846 MYH7P12883 1935 aa10.74□□□□□ -0.69
SMKR1-202ENST00000488846 BAG3O95817 575 aa10.74□□□□□ -0.69
SMKR1-202ENST00000488846 NEFLP07196 543 aa10.74□□□□□ -0.69
SMKR1-202ENST00000488846 CACNB3P54284 484 aa10.74□□□□□ -0.69
SMKR1-202ENST00000488846 MAP3K10Q02779 954 aa10.74□□□□□ -0.69
SMKR1-202ENST00000488846 SUPT20HL1Q3ZLR7 823 aa10.74□□□□□ -0.69
SMKR1-202ENST00000488846 NBPF12Q5TAG4 269 aaPredicted RBP10.74□□□□□ -0.69
SMKR1-202ENST00000488846 PRAMEF18Q5VWM3 479 aa10.74□□□□□ -0.69
SMKR1-202ENST00000488846 TMEM39BQ9GZU3 492 aa10.74□□□□□ -0.69
SMKR1-202ENST00000488846 GBA2Q9HCG7 927 aaPredicted RBP10.74□□□□□ -0.69
SMKR1-202ENST00000488846 DDX4Q9NQI0 724 aaKnown RBP10.74□□□□□ -0.69
SMKR1-202ENST00000488846 AATFQ9NY61 560 aaKnown RBP eCLIP10.74□□□□□ -0.69
SMKR1-202ENST00000488846 ZNF532Q9HCE3 1301 aa10.74□□□□□ -0.69
SMKR1-202ENST00000488846 FOCADQ5VW36 1801 aa10.74□□□□□ -0.69
SMKR1-202ENST00000488846 ATRNL1Q5VV63 1379 aa10.74□□□□□ -0.69
SMKR1-202ENST00000488846 UNCXA6NJT0 531 aa10.73□□□□□ -0.69
SMKR1-202ENST00000488846 ZFYP08048 801 aaPredicted RBP10.73□□□□□ -0.69
SMKR1-202ENST00000488846 RGS3P49796 1198 aa10.73□□□□□ -0.69
SMKR1-202ENST00000488846 LDLRAD1Q5T700 205 aa10.73□□□□□ -0.69
SMKR1-202ENST00000488846 ZSCAN25Q6NSZ9 544 aa10.73□□□□□ -0.69
SMKR1-202ENST00000488846 CDAN1Q8IWY9 1227 aa10.73□□□□□ -0.69
SMKR1-202ENST00000488846 ZFPM1Q8IX07 1006 aa10.73□□□□□ -0.69
SMKR1-202ENST00000488846 SH3RF3Q8TEJ3 882 aaPredicted RBP10.73□□□□□ -0.69
SMKR1-202ENST00000488846 EVI5LQ96CN4 794 aa10.73□□□□□ -0.69
SMKR1-202ENST00000488846 CDK5RAP2Q96SN8 1893 aa10.72□□□□□ -0.69
SMKR1-202ENST00000488846 CHGBP05060 677 aa10.72□□□□□ -0.69
SMKR1-202ENST00000488846 NF2P35240 595 aa10.72□□□□□ -0.69
SMKR1-202ENST00000488846 DYNLL1P63167 89 aaKnown RBP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms