RNA–Protein interactions for RNA: ENST00000487645.1

COL4A6-207, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 3

Gene COL4A6, Length 812 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-207ENST00000487645 FSD1Q9BTV5 496 aa16.09■□□□□ 0.17
COL4A6-207ENST00000487645 TDRD3Q9H7E2 651 aaKnown RBP16.09■□□□□ 0.17
COL4A6-207ENST00000487645 CLEC11AQ9Y240 323 aa16.09■□□□□ 0.17
COL4A6-207ENST00000487645 PITPNM2Q9BZ72 1349 aa16.09■□□□□ 0.17
COL4A6-207ENST00000487645 ZNF532Q9HCE3 1301 aa16.09■□□□□ 0.17
COL4A6-207ENST00000487645 TOMM70O94826 608 aa16.08■□□□□ 0.16
COL4A6-207ENST00000487645 GSPT1P15170 499 aaKnown RBP16.08■□□□□ 0.16
COL4A6-207ENST00000487645 PLCG2P16885 1265 aa16.08■□□□□ 0.16
COL4A6-207ENST00000487645 SPDYE2Q495Y8 402 aa16.08■□□□□ 0.16
COL4A6-207ENST00000487645 FKBP1CQ5VVH2 108 aa16.08■□□□□ 0.16
COL4A6-207ENST00000487645 DCPSQ96C86 337 aaKnown RBP16.08■□□□□ 0.16
COL4A6-207ENST00000487645 USP40Q9NVE5 1235 aa16.08■□□□□ 0.16
COL4A6-207ENST00000487645 ZNF70Q9UC06 446 aaPredicted RBP16.08■□□□□ 0.16
COL4A6-207ENST00000487645 CDK5RAP2Q96SN8 1893 aa16.08■□□□□ 0.16
COL4A6-207ENST00000487645 SDSP20132 328 aa16.07■□□□□ 0.16
COL4A6-207ENST00000487645 BTDP43251 543 aa16.07■□□□□ 0.16
COL4A6-207ENST00000487645 RGS3P49796 1198 aa16.07■□□□□ 0.16
COL4A6-207ENST00000487645 CHADLQ6NUI6 762 aa16.07■□□□□ 0.16
COL4A6-207ENST00000487645 CDC42EP5Q6NZY7 148 aa16.07■□□□□ 0.16
COL4A6-207ENST00000487645 ADGRA1Q86SQ6 560 aa16.07■□□□□ 0.16
COL4A6-207ENST00000487645 SKAP1Q86WV1 359 aa16.07■□□□□ 0.16
COL4A6-207ENST00000487645 RFX7Q2KHR2 1363 aa16.07■□□□□ 0.16
COL4A6-207ENST00000487645 FOCADQ5VW36 1801 aa16.06■□□□□ 0.16
COL4A6-207ENST00000487645 ASTN2O75129 1339 aaPredicted RBP16.06■□□□□ 0.16
COL4A6-207ENST00000487645 MAGEB6P1A0A0J9YX57 407 aa16.06■□□□□ 0.16
COL4A6-207ENST00000487645 HIP1O00291 1037 aa16.06■□□□□ 0.16
COL4A6-207ENST00000487645 POTEIP0CG38 1075 aa16.06■□□□□ 0.16
COL4A6-207ENST00000487645 POTEJP0CG39 1038 aa16.06■□□□□ 0.16
COL4A6-207ENST00000487645 BMP2KLQ5H9B9 411 aa16.06■□□□□ 0.16
COL4A6-207ENST00000487645 ANGEL2Q5VTE6 544 aaKnown RBP16.06■□□□□ 0.16
COL4A6-207ENST00000487645 CDC37L1Q7L3B6 337 aa16.06■□□□□ 0.16
COL4A6-207ENST00000487645 APOBEC3FQ8IUX4 373 aaKnown RBP16.06■□□□□ 0.16
COL4A6-207ENST00000487645 RBM46Q8TBY0 533 aaKnown RBP16.06■□□□□ 0.16
COL4A6-207ENST00000487645 APPBP2Q92624 585 aa16.06■□□□□ 0.16
COL4A6-207ENST00000487645 GGA3Q9NZ52 723 aa16.06■□□□□ 0.16
COL4A6-207ENST00000487645 TMOD2Q9NZR1 351 aa16.06■□□□□ 0.16
COL4A6-207ENST00000487645 NPM3O75607 178 aaKnown RBP16.05■□□□□ 0.16
COL4A6-207ENST00000487645 RHBDL3P58872 404 aa16.05■□□□□ 0.16
COL4A6-207ENST00000487645 TNFAIP1Q13829 316 aa16.05■□□□□ 0.16
COL4A6-207ENST00000487645 ZMYM1Q5SVZ6 1142 aa16.05■□□□□ 0.16
COL4A6-207ENST00000487645 IDI2Q9BXS1 227 aa16.05■□□□□ 0.16
COL4A6-207ENST00000487645 AATFQ9NY61 560 aaKnown RBP eCLIP16.05■□□□□ 0.16
COL4A6-207ENST00000487645 CLRN2A0PK11 232 aa16.04■□□□□ 0.16
COL4A6-207ENST00000487645 TNNI2P48788 182 aa16.04■□□□□ 0.16
COL4A6-207ENST00000487645 SLFNL1Q499Z3 407 aa16.04■□□□□ 0.16
COL4A6-207ENST00000487645 FAM83AQ86UY5 434 aa16.04■□□□□ 0.16
COL4A6-207ENST00000487645 SULF1Q8IWU6 871 aa16.04■□□□□ 0.16
COL4A6-207ENST00000487645 MIGA1Q8NAN2 632 aa16.04■□□□□ 0.16
COL4A6-207ENST00000487645 SMC1BQ8NDV3 1235 aa16.04■□□□□ 0.16
COL4A6-207ENST00000487645 RIOK1Q9BRS2 568 aaKnown RBP16.04■□□□□ 0.16
COL4A6-207ENST00000487645 HELLSQ9NRZ9 838 aa16.04■□□□□ 0.16
COL4A6-207ENST00000487645 TRPM7Q96QT4 1865 aa16.03■□□□□ 0.16
COL4A6-207ENST00000487645 CHGBP05060 677 aa16.03■□□□□ 0.16
COL4A6-207ENST00000487645 DYNLL1P63167 89 aaKnown RBP16.03■□□□□ 0.16
COL4A6-207ENST00000487645 FSTL1Q12841 308 aa16.03■□□□□ 0.16
COL4A6-207ENST00000487645 MAP1SQ66K74 1059 aaPredicted RBP16.03■□□□□ 0.16
COL4A6-207ENST00000487645 KRT26Q7Z3Y9 468 aa16.03■□□□□ 0.16
COL4A6-207ENST00000487645 SH3RF3Q8TEJ3 882 aaPredicted RBP16.03■□□□□ 0.16
COL4A6-207ENST00000487645 OSBP2Q969R2 916 aa16.03■□□□□ 0.16
COL4A6-207ENST00000487645 PUS7LQ9H0K6 701 aaKnown RBP16.03■□□□□ 0.16
COL4A6-207ENST00000487645 VEZTQ9HBM0 779 aa16.03■□□□□ 0.16
COL4A6-207ENST00000487645 PPP2R3BQ9Y5P8 575 aa16.03■□□□□ 0.16
COL4A6-207ENST00000487645 MYH1P12882 1939 aa16.03■□□□□ 0.16
COL4A6-207ENST00000487645 ENTPD3O75355 529 aa16.02■□□□□ 0.16
COL4A6-207ENST00000487645 WDHD1O75717 1129 aaPredicted RBP16.02■□□□□ 0.16
COL4A6-207ENST00000487645 ITGBL1O95965 494 aaPredicted RBP16.02■□□□□ 0.16
COL4A6-207ENST00000487645 USP48Q86UV5 1035 aa16.02■□□□□ 0.16
COL4A6-207ENST00000487645 TEX11Q8IYF3 940 aa16.02■□□□□ 0.16
COL4A6-207ENST00000487645 FAM151AQ8WW52 585 aa16.02■□□□□ 0.16
COL4A6-207ENST00000487645 AIDAQ96BJ3 306 aa16.02■□□□□ 0.16
COL4A6-207ENST00000487645 DEFB129Q9H1M3 183 aa16.02■□□□□ 0.16
COL4A6-207ENST00000487645 TCP10L2B9ZVM9 353 aa16.01■□□□□ 0.15
COL4A6-207ENST00000487645 MBD4O95243 580 aa16.01■□□□□ 0.15
COL4A6-207ENST00000487645 CACNB3P54284 484 aa16.01■□□□□ 0.15
COL4A6-207ENST00000487645 RASA3Q14644 834 aa16.01■□□□□ 0.15
COL4A6-207ENST00000487645 MCMDC2Q4G0Z9 681 aa16.01■□□□□ 0.15
COL4A6-207ENST00000487645 STRBPQ96SI9 672 aaKnown RBP16.01■□□□□ 0.15
COL4A6-207ENST00000487645 CRNKL1Q9BZJ0 848 aaKnown RBP16.01■□□□□ 0.15
COL4A6-207ENST00000487645 DIAPH3Q9NSV4 1193 aa16.01■□□□□ 0.15
COL4A6-207ENST00000487645 FAM198AQ9UFP1 575 aa16.01■□□□□ 0.15
COL4A6-207ENST00000487645 GNAT2P19087 354 aa16■□□□□ 0.15
COL4A6-207ENST00000487645 CHMLP26374 656 aa16■□□□□ 0.15
COL4A6-207ENST00000487645 NFIAQ12857 509 aa16■□□□□ 0.15
COL4A6-207ENST00000487645 LCORLQ8N3X6 602 aa16■□□□□ 0.15
COL4A6-207ENST00000487645 GLIS2Q9BZE0 524 aaPredicted RBP16■□□□□ 0.15
COL4A6-207ENST00000487645 ARMT1Q9H993 441 aa16■□□□□ 0.15
COL4A6-207ENST00000487645 CNTNAP1P78357 1384 aa16■□□□□ 0.15
COL4A6-207ENST00000487645 GPAA1O43292 621 aa15.99■□□□□ 0.15
COL4A6-207ENST00000487645 USP5P45974 858 aa15.99■□□□□ 0.15
COL4A6-207ENST00000487645 MFAP1P55081 439 aaKnown RBP15.99■□□□□ 0.15
COL4A6-207ENST00000487645 NMIQ13287 307 aaPredicted RBP15.99■□□□□ 0.15
COL4A6-207ENST00000487645 TGFBRAP1Q8WUH2 860 aa15.99■□□□□ 0.15
COL4A6-207ENST00000487645 RUFY2Q8WXA3 655 aa15.99■□□□□ 0.15
COL4A6-207ENST00000487645 FAM227BQ96M60 508 aa15.99■□□□□ 0.15
COL4A6-207ENST00000487645 SEC62Q99442 399 aaKnown RBP15.99■□□□□ 0.15
COL4A6-207ENST00000487645 ATP8A2Q9NTI2 1148 aa15.99■□□□□ 0.15
COL4A6-207ENST00000487645 BAZ2AQ9UIF9 1905 aaKnown RBP15.99■□□□□ 0.15
COL4A6-207ENST00000487645 A0A0D9SFI3 127 aa15.98■□□□□ 0.15
COL4A6-207ENST00000487645 ADM5C9JUS6 153 aa15.98■□□□□ 0.15
COL4A6-207ENST00000487645 M0R2C6 588 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms