RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 GLIS3Q8NEA6 775 aa7.27□□□□□ -1.25
SNRNP40-205ENST00000486941 TBC1D32Q96NH3 1257 aa7.27□□□□□ -1.25
SNRNP40-205ENST00000486941 ABCB6Q9NP58 842 aa7.27□□□□□ -1.25
SNRNP40-205ENST00000486941 PPP1R9AQ9ULJ8 1098 aa7.27□□□□□ -1.25
SNRNP40-205ENST00000486941 ABCC8Q09428 1581 aa7.27□□□□□ -1.25
SNRNP40-205ENST00000486941 TOPBP1Q92547 1522 aa7.27□□□□□ -1.25
SNRNP40-205ENST00000486941 KRTAP4-8A0A0G2JLE6 195 aa7.26□□□□□ -1.25
SNRNP40-205ENST00000486941 AKAP4Q5JQC9 854 aa7.26□□□□□ -1.25
SNRNP40-205ENST00000486941 TXNDC2Q86VQ3 553 aa7.26□□□□□ -1.25
SNRNP40-205ENST00000486941 BRPF3Q9ULD4 1205 aa7.26□□□□□ -1.25
SNRNP40-205ENST00000486941 MTMR7Q9Y216 660 aa7.26□□□□□ -1.25
SNRNP40-205ENST00000486941 ZNF608Q9ULD9 1512 aaPredicted RBP7.26□□□□□ -1.25
SNRNP40-205ENST00000486941 RAB6AP20340 208 aa7.25□□□□□ -1.25
SNRNP40-205ENST00000486941 ZNF765Q7L2R6 523 aa7.25□□□□□ -1.25
SNRNP40-205ENST00000486941 DYMQ7RTS9 669 aa7.25□□□□□ -1.25
SNRNP40-205ENST00000486941 WDR18Q9BV38 432 aa7.25□□□□□ -1.25
SNRNP40-205ENST00000486941 ZC3H7BQ9UGR2 993 aaKnown RBP7.25□□□□□ -1.25
SNRNP40-205ENST00000486941 RNF114Q9Y508 228 aa7.25□□□□□ -1.25
SNRNP40-205ENST00000486941 RIMBP3CA6NJZ7 1639 aa7.24□□□□□ -1.25
SNRNP40-205ENST00000486941 RIMBP3BA6NNM3 1639 aa7.24□□□□□ -1.25
SNRNP40-205ENST00000486941 RIMBP3Q9UFD9 1639 aa7.24□□□□□ -1.25
SNRNP40-205ENST00000486941 CYP26A1O43174 497 aa7.24□□□□□ -1.25
SNRNP40-205ENST00000486941 AOC2O75106 756 aa7.24□□□□□ -1.25
SNRNP40-205ENST00000486941 CYP11A1P05108 521 aa7.24□□□□□ -1.25
SNRNP40-205ENST00000486941 GLYCTKQ8IVS8 523 aa7.24□□□□□ -1.25
SNRNP40-205ENST00000486941 EHD4Q9H223 541 aa7.24□□□□□ -1.25
SNRNP40-205ENST00000486941 LGR6Q9HBX8 967 aa7.24□□□□□ -1.25
SNRNP40-205ENST00000486941 USTQ9Y2C2 406 aa7.24□□□□□ -1.25
SNRNP40-205ENST00000486941 U3KQE9 123 aa7.24□□□□□ -1.25
SNRNP40-205ENST00000486941 EIF1AYO14602 144 aaKnown RBP7.23□□□□□ -1.25
SNRNP40-205ENST00000486941 ZNF157P51786 506 aaPredicted RBP7.23□□□□□ -1.25
SNRNP40-205ENST00000486941 CPSF6Q16630 551 aaKnown RBP eCLIP7.23□□□□□ -1.25
SNRNP40-205ENST00000486941 CCDC74AQ96AQ1 378 aa7.23□□□□□ -1.25
SNRNP40-205ENST00000486941 NIF3L1Q9GZT8 377 aa7.23□□□□□ -1.25
SNRNP40-205ENST00000486941 PAK6Q9NQU5 681 aaPredicted RBP7.23□□□□□ -1.25
SNRNP40-205ENST00000486941 DNMBPQ6XZF7 1577 aa7.23□□□□□ -1.25
SNRNP40-205ENST00000486941 ZNF862O60290 1169 aa7.22□□□□□ -1.25
SNRNP40-205ENST00000486941 CPNE3O75131 537 aaKnown RBP7.22□□□□□ -1.25
SNRNP40-205ENST00000486941 LIG1P18858 919 aa7.22□□□□□ -1.25
SNRNP40-205ENST00000486941 TXKP42681 527 aa7.22□□□□□ -1.25
SNRNP40-205ENST00000486941 ASPAP45381 313 aa7.22□□□□□ -1.25
SNRNP40-205ENST00000486941 EPS8L3Q8TE67 593 aaKnown RBP7.22□□□□□ -1.25
SNRNP40-205ENST00000486941 METTL22Q9BUU2 404 aaPredicted RBP7.22□□□□□ -1.25
SNRNP40-205ENST00000486941 CCDC86Q9H6F5 360 aaKnown RBP7.22□□□□□ -1.25
SNRNP40-205ENST00000486941 ARHGEF11O15085 1522 aa7.22□□□□□ -1.25
SNRNP40-205ENST00000486941 EIF4G3O43432 1585 aaKnown RBP7.21□□□□□ -1.25
SNRNP40-205ENST00000486941 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.21□□□□□ -1.26
SNRNP40-205ENST00000486941 TMEM238LA0A1B0GVL6 79 aa7.21□□□□□ -1.26
SNRNP40-205ENST00000486941 GRM2Q14416 872 aa7.21□□□□□ -1.26
SNRNP40-205ENST00000486941 PRPF40BQ6NWY9 871 aaKnown RBP7.21□□□□□ -1.26
SNRNP40-205ENST00000486941 PI16Q6UXB8 463 aa7.21□□□□□ -1.26
SNRNP40-205ENST00000486941 GIMAP7Q8NHV1 300 aa7.21□□□□□ -1.26
SNRNP40-205ENST00000486941 CORO1BQ9BR76 489 aa7.21□□□□□ -1.26
SNRNP40-205ENST00000486941 RAD18Q9NS91 495 aa7.21□□□□□ -1.26
SNRNP40-205ENST00000486941 BSDC1Q9NW68 430 aaPredicted RBP7.21□□□□□ -1.26
SNRNP40-205ENST00000486941 AP4E1Q9UPM8 1137 aa7.21□□□□□ -1.26
SNRNP40-205ENST00000486941 PCDHGC5Q9Y5F6 944 aa7.21□□□□□ -1.26
SNRNP40-205ENST00000486941 TARBP1Q13395 1621 aaKnown RBP7.2□□□□□ -1.26
SNRNP40-205ENST00000486941 TMPRSS2O15393 492 aa7.2□□□□□ -1.26
SNRNP40-205ENST00000486941 PTPN12Q05209 780 aaKnown RBP7.2□□□□□ -1.26
SNRNP40-205ENST00000486941 MAP7Q14244 749 aa7.2□□□□□ -1.26
SNRNP40-205ENST00000486941 SPRED2Q7Z698 418 aa7.2□□□□□ -1.26
SNRNP40-205ENST00000486941 STK35Q8TDR2 534 aa7.2□□□□□ -1.26
SNRNP40-205ENST00000486941 ZC3H12CQ9C0D7 883 aaKnown RBP7.2□□□□□ -1.26
SNRNP40-205ENST00000486941 LRRC4CQ9HCJ2 640 aa7.2□□□□□ -1.26
SNRNP40-205ENST00000486941 AQRO60306 1485 aaKnown RBP eCLIP7.19□□□□□ -1.261e-7■■□□□ 13.2
SNRNP40-205ENST00000486941 CHD1O14646 1710 aa7.19□□□□□ -1.26
SNRNP40-205ENST00000486941 OGFOD3Q6PK18 319 aa7.19□□□□□ -1.26
SNRNP40-205ENST00000486941 ZNF574Q6ZN55 896 aaPredicted RBP7.19□□□□□ -1.26
SNRNP40-205ENST00000486941 VSIG10LQ86VR7 867 aa7.19□□□□□ -1.26
SNRNP40-205ENST00000486941 DISC1Q9NRI5 854 aa7.19□□□□□ -1.26
SNRNP40-205ENST00000486941 CRIM1Q9NZV1 1036 aa7.19□□□□□ -1.26
SNRNP40-205ENST00000486941 ANGEL1Q9UNK9 670 aaKnown RBP7.19□□□□□ -1.26
SNRNP40-205ENST00000486941 DAGLAQ9Y4D2 1042 aa7.19□□□□□ -1.26
SNRNP40-205ENST00000486941 SYNGAP1Q96PV0 1343 aa7.19□□□□□ -1.26
SNRNP40-205ENST00000486941 POLA1P09884 1462 aaPredicted RBP7.18□□□□□ -1.26
SNRNP40-205ENST00000486941 NDUFB5O43674 189 aa7.18□□□□□ -1.26
SNRNP40-205ENST00000486941 ITGB5P18084 799 aa7.18□□□□□ -1.26
SNRNP40-205ENST00000486941 CYB5RLQ6IPT4 315 aa7.18□□□□□ -1.26
SNRNP40-205ENST00000486941 PDZD3Q86UT5 571 aa7.18□□□□□ -1.26
SNRNP40-205ENST00000486941 YIPF2Q9BWQ6 316 aa7.18□□□□□ -1.26
SNRNP40-205ENST00000486941 BTBD11A6QL63 1104 aa7.17□□□□□ -1.26
SNRNP40-205ENST00000486941 EIF4EBP3O60516 100 aaPredicted RBP7.17□□□□□ -1.26
SNRNP40-205ENST00000486941 BNIP3Q12983 259 aa7.17□□□□□ -1.26
SNRNP40-205ENST00000486941 CDK5R2Q13319 367 aa7.17□□□□□ -1.26
SNRNP40-205ENST00000486941 PDE3BQ13370 1112 aa7.17□□□□□ -1.26
SNRNP40-205ENST00000486941 PDE3AQ14432 1141 aa7.17□□□□□ -1.26
SNRNP40-205ENST00000486941 RPS26P11Q5JNZ5 115 aaPredicted RBP7.17□□□□□ -1.26
SNRNP40-205ENST00000486941 DUSP27Q5VZP5 1158 aa7.17□□□□□ -1.26
SNRNP40-205ENST00000486941 TP53INP2Q8IXH6 220 aa7.17□□□□□ -1.26
SNRNP40-205ENST00000486941 BCL7CQ8WUZ0 217 aaPredicted RBP7.17□□□□□ -1.26
SNRNP40-205ENST00000486941 FBXL18Q96ME1 805 aa7.17□□□□□ -1.26
SNRNP40-205ENST00000486941 FANCD2OSQ96PS1 177 aa7.17□□□□□ -1.26
SNRNP40-205ENST00000486941 CITED4Q96RK1 184 aa7.17□□□□□ -1.26
SNRNP40-205ENST00000486941 CSRNP1Q96S65 589 aa7.17□□□□□ -1.26
SNRNP40-205ENST00000486941 DNAJC25Q9H1X3 360 aa7.17□□□□□ -1.26
SNRNP40-205ENST00000486941 NEFLP07196 543 aa7.16□□□□□ -1.26
SNRNP40-205ENST00000486941 RETREG2Q8NC44 543 aa7.16□□□□□ -1.26
SNRNP40-205ENST00000486941 SOGA1O94964 1423 aa7.16□□□□□ -1.26
SNRNP40-205ENST00000486941 GADD45BO75293 160 aaPredicted RBP7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms