RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 MRPS27Q92552 414 aaKnown RBP20.96■□□□□ 0.95
PDLIM7-207ENST00000486828 NEDD4P46934 1319 aa20.96■□□□□ 0.95
PDLIM7-207ENST00000486828 SNAP23O00161 211 aa20.95■□□□□ 0.94
PDLIM7-207ENST00000486828 CDKL5O76039 1030 aa20.95■□□□□ 0.94
PDLIM7-207ENST00000486828 MBD4O95243 580 aa20.95■□□□□ 0.94
PDLIM7-207ENST00000486828 STX1AQ16623 288 aa20.95■□□□□ 0.94
PDLIM7-207ENST00000486828 MYSM1Q5VVJ2 828 aa20.95■□□□□ 0.94
PDLIM7-207ENST00000486828 IFNL3Q8IZI9 196 aa20.95■□□□□ 0.94
PDLIM7-207ENST00000486828 KCNG4Q8TDN1 519 aa20.95■□□□□ 0.94
PDLIM7-207ENST00000486828 KCNF1Q9H3M0 494 aa20.95■□□□□ 0.94
PDLIM7-207ENST00000486828 EPB41L4AQ9HCS5 686 aaPredicted RBP20.95■□□□□ 0.94
PDLIM7-207ENST00000486828 NIP7Q9Y221 180 aaKnown RBP eCLIP20.95■□□□□ 0.94
PDLIM7-207ENST00000486828 POLR3DP05423 398 aaPredicted RBP20.94■□□□□ 0.94
PDLIM7-207ENST00000486828 KIF23Q02241 960 aaPredicted RBP20.94■□□□□ 0.94
PDLIM7-207ENST00000486828 STK38Q15208 465 aa20.94■□□□□ 0.94
PDLIM7-207ENST00000486828 APOA5Q6Q788 366 aa20.94■□□□□ 0.94
PDLIM7-207ENST00000486828 ILDR2Q71H61 639 aa20.94■□□□□ 0.94
PDLIM7-207ENST00000486828 PLA2G4DQ86XP0 818 aa20.94■□□□□ 0.94
PDLIM7-207ENST00000486828 IGDCC4Q8TDY8 1250 aa20.94■□□□□ 0.94
PDLIM7-207ENST00000486828 SPTLC3Q9NUV7 552 aa20.94■□□□□ 0.94
PDLIM7-207ENST00000486828 CLIC4Q9Y696 253 aa20.94■□□□□ 0.94
PDLIM7-207ENST00000486828 MYH14Q7Z406 1995 aaKnown RBP20.94■□□□□ 0.94
PDLIM7-207ENST00000486828 TIAM2Q8IVF5 1701 aa20.94■□□□□ 0.94
PDLIM7-207ENST00000486828 ZNF75DP51815 510 aa20.94■□□□□ 0.94
PDLIM7-207ENST00000486828 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.94■□□□□ 0.94
PDLIM7-207ENST00000486828 FMR1NBQ8N0W7 255 aaPredicted RBP20.94■□□□□ 0.94
PDLIM7-207ENST00000486828 NAPBQ9H115 298 aa20.94■□□□□ 0.94
PDLIM7-207ENST00000486828 KIF28PB7ZC32 967 aa20.93■□□□□ 0.94
PDLIM7-207ENST00000486828 IQCB1Q15051 598 aa20.93■□□□□ 0.94
PDLIM7-207ENST00000486828 SGMS1Q86VZ5 419 aa20.93■□□□□ 0.94
PDLIM7-207ENST00000486828 SF3A1Q15459 793 aaKnown RBP20.92■□□□□ 0.94
PDLIM7-207ENST00000486828 FAM182BQ5T319 152 aa20.92■□□□□ 0.94
PDLIM7-207ENST00000486828 CPLX2Q6PUV4 134 aaKnown RBP20.92■□□□□ 0.94
PDLIM7-207ENST00000486828 TRIM5Q9C035 493 aa20.92■□□□□ 0.94
PDLIM7-207ENST00000486828 ARMT1Q9H993 441 aa20.92■□□□□ 0.94
PDLIM7-207ENST00000486828 LY9Q9HBG7 655 aa20.92■□□□□ 0.94
PDLIM7-207ENST00000486828 GJB4Q9NTQ9 266 aa20.92■□□□□ 0.94
PDLIM7-207ENST00000486828 SPTLC2O15270 562 aa20.92■□□□□ 0.94
PDLIM7-207ENST00000486828 BCAMP50895 628 aa20.92■□□□□ 0.94
PDLIM7-207ENST00000486828 SYNE3Q6ZMZ3 975 aa20.92■□□□□ 0.94
PDLIM7-207ENST00000486828 C11orf57Q6ZUT1 292 aaPredicted RBP20.92■□□□□ 0.94
PDLIM7-207ENST00000486828 KIAA1524Q8TCG1 905 aa20.92■□□□□ 0.94
PDLIM7-207ENST00000486828 ALG1Q9BT22 464 aa20.92■□□□□ 0.94
PDLIM7-207ENST00000486828 CNNM2Q9H8M5 875 aa20.92■□□□□ 0.94
PDLIM7-207ENST00000486828 SENP2Q9HC62 589 aa20.92■□□□□ 0.94
PDLIM7-207ENST00000486828 PNPLA7Q6ZV29 1317 aa20.91■□□□□ 0.94
PDLIM7-207ENST00000486828 GSG1L2A8MUP6 293 aa20.91■□□□□ 0.94
PDLIM7-207ENST00000486828 ZBTB43O43298 467 aa20.91■□□□□ 0.94
PDLIM7-207ENST00000486828 GNAT2P19087 354 aa20.91■□□□□ 0.94
PDLIM7-207ENST00000486828 CDC27P30260 824 aa20.91■□□□□ 0.94
PDLIM7-207ENST00000486828 LIFRP42702 1097 aa20.91■□□□□ 0.94
PDLIM7-207ENST00000486828 SMARCC1Q92922 1105 aaPredicted RBP20.91■□□□□ 0.94
PDLIM7-207ENST00000486828 ZNF652Q9Y2D9 606 aa20.91■□□□□ 0.94
PDLIM7-207ENST00000486828 BCORQ6W2J9 1755 aa20.91■□□□□ 0.94
PDLIM7-207ENST00000486828 CHD4Q14839 1912 aa20.9■□□□□ 0.94
PDLIM7-207ENST00000486828 CTDSPL2Q05D32 466 aa20.9■□□□□ 0.94
PDLIM7-207ENST00000486828 CHRNDQ07001 517 aa20.9■□□□□ 0.94
PDLIM7-207ENST00000486828 TMEM67Q5HYA8 995 aa20.9■□□□□ 0.94
PDLIM7-207ENST00000486828 NFXL1Q6ZNB6 911 aa20.9■□□□□ 0.94
PDLIM7-207ENST00000486828 MICU3Q86XE3 530 aa20.9■□□□□ 0.94
PDLIM7-207ENST00000486828 ANO10Q9NW15 660 aa20.9■□□□□ 0.94
PDLIM7-207ENST00000486828 BRWD3Q6RI45 1802 aa20.9■□□□□ 0.94
PDLIM7-207ENST00000486828 UQCRHLA0A096LP55 91 aa20.9■□□□□ 0.94
PDLIM7-207ENST00000486828 GOLGA6L19H0YKK7 550 aa20.9■□□□□ 0.94
PDLIM7-207ENST00000486828 UQCRHP07919 91 aa20.9■□□□□ 0.94
PDLIM7-207ENST00000486828 RXRAP19793 462 aa20.9■□□□□ 0.94
PDLIM7-207ENST00000486828 DNTTIP2Q5QJE6 756 aaKnown RBP20.9■□□□□ 0.94
PDLIM7-207ENST00000486828 AKNAD1Q5T1N1 836 aa20.9■□□□□ 0.94
PDLIM7-207ENST00000486828 ANO1Q5XXA6 986 aa20.9■□□□□ 0.94
PDLIM7-207ENST00000486828 SARM1Q6SZW1 724 aa20.9■□□□□ 0.94
PDLIM7-207ENST00000486828 KRT27Q7Z3Y8 459 aa20.9■□□□□ 0.94
PDLIM7-207ENST00000486828 C17orf53Q8N3J3 647 aaPredicted RBP20.9■□□□□ 0.94
PDLIM7-207ENST00000486828 KRT23Q9C075 422 aa20.9■□□□□ 0.94
PDLIM7-207ENST00000486828 PYCARDQ9ULZ3 195 aa20.9■□□□□ 0.94
PDLIM7-207ENST00000486828 COL5A3P25940 1745 aaPredicted RBP20.89■□□□□ 0.94
PDLIM7-207ENST00000486828 A0A1B0GVL5 298 aa20.89■□□□□ 0.93
PDLIM7-207ENST00000486828 GOLGA8AA7E2F4 631 aa20.89■□□□□ 0.93
PDLIM7-207ENST00000486828 PTGS1P23219 599 aa20.89■□□□□ 0.93
PDLIM7-207ENST00000486828 CDC25BP30305 580 aa20.89■□□□□ 0.93
PDLIM7-207ENST00000486828 NDUFA8P51970 172 aa20.89■□□□□ 0.93
PDLIM7-207ENST00000486828 NTRK3Q16288 839 aa20.89■□□□□ 0.93
PDLIM7-207ENST00000486828 LCORLQ8N3X6 602 aa20.89■□□□□ 0.93
PDLIM7-207ENST00000486828 AIFM3Q96NN9 605 aa20.89■□□□□ 0.93
PDLIM7-207ENST00000486828 NACAP1Q9BZK3 213 aa20.89■□□□□ 0.93
PDLIM7-207ENST00000486828 INCENPQ9NQS7 918 aa20.89■□□□□ 0.93
PDLIM7-207ENST00000486828 ZSWIM5Q9P217 1185 aa20.89■□□□□ 0.93
PDLIM7-207ENST00000486828 KRT40Q6A162 431 aa20.88■□□□□ 0.93
PDLIM7-207ENST00000486828 CDC5LQ99459 802 aaKnown RBP20.88■□□□□ 0.93
PDLIM7-207ENST00000486828 FAM217BQ9NTX9 383 aaPredicted RBP20.88■□□□□ 0.93
PDLIM7-207ENST00000486828 TACC3Q9Y6A5 838 aa20.88■□□□□ 0.93
PDLIM7-207ENST00000486828 ECM29Q5VYK3 1845 aa20.88■□□□□ 0.93
PDLIM7-207ENST00000486828 IFIT3O14879 490 aaKnown RBP20.88■□□□□ 0.93
PDLIM7-207ENST00000486828 CLEC4GQ6UXB4 293 aa20.88■□□□□ 0.93
PDLIM7-207ENST00000486828 MFSD6Q6ZSS7 791 aa20.88■□□□□ 0.93
PDLIM7-207ENST00000486828 DRC7Q8IY82 874 aa20.88■□□□□ 0.93
PDLIM7-207ENST00000486828 STAG1Q8WVM7 1258 aa20.88■□□□□ 0.93
PDLIM7-207ENST00000486828 SLC4A4Q9Y6R1 1079 aa20.88■□□□□ 0.93
PDLIM7-207ENST00000486828 NID2Q14112 1375 aa20.88■□□□□ 0.93
PDLIM7-207ENST00000486828 STK36Q9NRP7 1315 aa20.87■□□□□ 0.93
PDLIM7-207ENST00000486828 PRKAB2O43741 272 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms