RNA–Protein interactions for RNA: ENST00000486524.1

SLX4-203, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 2

Gene SLX4, Length 3,075 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-203ENST00000486524 ZNF165P49910 485 aa13.13□□□□□ -0.31
SLX4-203ENST00000486524 STK38Q15208 465 aa13.13□□□□□ -0.31
SLX4-203ENST00000486524 PCDHA7Q9UN72 937 aa13.13□□□□□ -0.31
SLX4-203ENST00000486524 MYH15Q9Y2K3 1946 aa13.13□□□□□ -0.31
SLX4-203ENST00000486524 A0A1B0GVL5 298 aa13.12□□□□□ -0.31
SLX4-203ENST00000486524 UBE2Q2LH0YL09 131 aa13.12□□□□□ -0.31
SLX4-203ENST00000486524 KINO60870 393 aaKnown RBP13.12□□□□□ -0.31
SLX4-203ENST00000486524 APOA5Q6Q788 366 aa13.12□□□□□ -0.31
SLX4-203ENST00000486524 ZSWIM5Q9P217 1185 aa13.12□□□□□ -0.31
SLX4-203ENST00000486524 TACC3Q9Y6A5 838 aa13.12□□□□□ -0.31
SLX4-203ENST00000486524 COL4A1P02462 1669 aa13.12□□□□□ -0.31
SLX4-203ENST00000486524 GSG1L2A8MUP6 293 aa13.12□□□□□ -0.31
SLX4-203ENST00000486524 IFIT3O14879 490 aaKnown RBP13.12□□□□□ -0.31
SLX4-203ENST00000486524 FAM182BQ5T319 152 aa13.12□□□□□ -0.31
SLX4-203ENST00000486524 RBM43Q6ZSC3 357 aaKnown RBP13.12□□□□□ -0.31
SLX4-203ENST00000486524 ALG1Q9BT22 464 aa13.12□□□□□ -0.31
SLX4-203ENST00000486524 ZMYM6O95789 1325 aa13.12□□□□□ -0.31
SLX4-203ENST00000486524 LRP5O75197 1615 aa13.12□□□□□ -0.31
SLX4-203ENST00000486524 NRAPQ86VF7 1730 aa13.12□□□□□ -0.31
SLX4-203ENST00000486524 ZBTB43O43298 467 aa13.11□□□□□ -0.31
SLX4-203ENST00000486524 SNW1Q13573 536 aaKnown RBP13.11□□□□□ -0.31
SLX4-203ENST00000486524 SMARCC1Q92922 1105 aaPredicted RBP13.11□□□□□ -0.31
SLX4-203ENST00000486524 RAI14Q9P0K7 980 aa13.11□□□□□ -0.31
SLX4-203ENST00000486524 TAF1P21675 1872 aa13.11□□□□□ -0.31
SLX4-203ENST00000486524 GNL2Q13823 731 aaKnown RBP13.11□□□□□ -0.31
SLX4-203ENST00000486524 DNTTIP2Q5QJE6 756 aaKnown RBP13.11□□□□□ -0.31
SLX4-203ENST00000486524 SYNE3Q6ZMZ3 975 aa13.11□□□□□ -0.31
SLX4-203ENST00000486524 ANKRD18AQ8IVF6 992 aa13.11□□□□□ -0.31
SLX4-203ENST00000486524 DDX60Q8IY21 1712 aaKnown RBP13.11□□□□□ -0.31
SLX4-203ENST00000486524 DRC7Q8IY82 874 aa13.11□□□□□ -0.31
SLX4-203ENST00000486524 CCDC82Q8N4S0 544 aa13.11□□□□□ -0.31
SLX4-203ENST00000486524 IGDCC4Q8TDY8 1250 aa13.11□□□□□ -0.31
SLX4-203ENST00000486524 CDC5LQ99459 802 aaKnown RBP13.11□□□□□ -0.31
SLX4-203ENST00000486524 LY9Q9HBG7 655 aa13.11□□□□□ -0.31
SLX4-203ENST00000486524 WDR19Q8NEZ3 1342 aa13.11□□□□□ -0.31
SLX4-203ENST00000486524 GOLGA8AA7E2F4 631 aa13.11□□□□□ -0.31
SLX4-203ENST00000486524 CYP7A1P22680 504 aa13.11□□□□□ -0.31
SLX4-203ENST00000486524 FAM160A1Q05DH4 1040 aa13.11□□□□□ -0.31
SLX4-203ENST00000486524 MYSM1Q5VVJ2 828 aa13.11□□□□□ -0.31
SLX4-203ENST00000486524 MFSD6Q6ZSS7 791 aa13.11□□□□□ -0.31
SLX4-203ENST00000486524 C11orf57Q6ZUT1 292 aaPredicted RBP13.11□□□□□ -0.31
SLX4-203ENST00000486524 ADGRA1Q86SQ6 560 aa13.11□□□□□ -0.31
SLX4-203ENST00000486524 SDR42E1Q8WUS8 393 aa13.11□□□□□ -0.31
SLX4-203ENST00000486524 NGLY1Q96IV0 654 aa13.11□□□□□ -0.31
SLX4-203ENST00000486524 TRIM5Q9C035 493 aa13.11□□□□□ -0.31
SLX4-203ENST00000486524 RTEL1Q9NZ71 1219 aa13.11□□□□□ -0.31
SLX4-203ENST00000486524 BARGINQ6ZT62 677 aa13.1□□□□□ -0.31
SLX4-203ENST00000486524 VPS37DQ86XT2 251 aa13.1□□□□□ -0.31
SLX4-203ENST00000486524 LINC00301Q8NCQ3 95 aa13.1□□□□□ -0.31
SLX4-203ENST00000486524 SLC12A7Q9Y666 1083 aa13.1□□□□□ -0.31
SLX4-203ENST00000486524 CCDC69A6NI79 296 aa13.1□□□□□ -0.31
SLX4-203ENST00000486524 MINDY4BA8MYZ0 360 aa13.1□□□□□ -0.31
SLX4-203ENST00000486524 KIF23Q02241 960 aaPredicted RBP13.1□□□□□ -0.31
SLX4-203ENST00000486524 ATL3Q6DD88 541 aa13.1□□□□□ -0.31
SLX4-203ENST00000486524 MRPS27Q92552 414 aaKnown RBP13.1□□□□□ -0.31
SLX4-203ENST00000486524 NACAP1Q9BZK3 213 aa13.1□□□□□ -0.31
SLX4-203ENST00000486524 SMIM22K7EJ46 135 aa13.09□□□□□ -0.31
SLX4-203ENST00000486524 MARCKSP29966 332 aaPredicted RBP13.09□□□□□ -0.31
SLX4-203ENST00000486524 NDUFA8P51970 172 aa13.09□□□□□ -0.31
SLX4-203ENST00000486524 AKNAD1Q5T1N1 836 aa13.09□□□□□ -0.31
SLX4-203ENST00000486524 TBC1D9BQ66K14 1250 aa13.09□□□□□ -0.31
SLX4-203ENST00000486524 CMTR1Q8N1G2 835 aaKnown RBP13.09□□□□□ -0.31
SLX4-203ENST00000486524 TMEM87BQ96K49 555 aa13.09□□□□□ -0.31
SLX4-203ENST00000486524 SDF4Q9BRK5 362 aa13.09□□□□□ -0.31
SLX4-203ENST00000486524 SRP68Q9UHB9 627 aaKnown RBP13.09□□□□□ -0.31
SLX4-203ENST00000486524 SPTLC2O15270 562 aa13.09□□□□□ -0.31
SLX4-203ENST00000486524 CPLX2Q6PUV4 134 aaKnown RBP13.09□□□□□ -0.31
SLX4-203ENST00000486524 ENGASEQ8NFI3 743 aa13.09□□□□□ -0.31
SLX4-203ENST00000486524 CELF1Q92879 486 aaKnown RBP13.09□□□□□ -0.31
SLX4-203ENST00000486524 SLC26A6Q9BXS9 759 aa13.09□□□□□ -0.31
SLX4-203ENST00000486524 ARAP2Q8WZ64 1704 aa13.09□□□□□ -0.31
SLX4-203ENST00000486524 RANBP6O60518 1105 aaKnown RBP13.09□□□□□ -0.31
SLX4-203ENST00000486524 CDKL5O76039 1030 aa13.09□□□□□ -0.31
SLX4-203ENST00000486524 IARSP41252 1262 aaKnown RBP13.09□□□□□ -0.31
SLX4-203ENST00000486524 ALX1Q15699 326 aa13.09□□□□□ -0.31
SLX4-203ENST00000486524 KRT40Q6A162 431 aa13.09□□□□□ -0.31
SLX4-203ENST00000486524 PTGS1P23219 599 aa13.08□□□□□ -0.32
SLX4-203ENST00000486524 PDE4CQ08493 712 aa13.08□□□□□ -0.32
SLX4-203ENST00000486524 ADALQ6DHV7 355 aa13.08□□□□□ -0.32
SLX4-203ENST00000486524 BRAPQ7Z569 592 aa13.08□□□□□ -0.32
SLX4-203ENST00000486524 GOLGA6L19H0YKK7 550 aa13.08□□□□□ -0.32
SLX4-203ENST00000486524 STX1AQ16623 288 aa13.08□□□□□ -0.32
SLX4-203ENST00000486524 ANO1Q5XXA6 986 aa13.08□□□□□ -0.32
SLX4-203ENST00000486524 KCNF1Q9H3M0 494 aa13.08□□□□□ -0.32
SLX4-203ENST00000486524 C4AP0C0L4 1744 aa13.07□□□□□ -0.32
SLX4-203ENST00000486524 C4BP0C0L5 1744 aa13.07□□□□□ -0.32
SLX4-203ENST00000486524 CTAGE5O15320 804 aa13.07□□□□□ -0.32
SLX4-203ENST00000486524 KLRK1P26718 216 aa13.07□□□□□ -0.32
SLX4-203ENST00000486524 KCNG4Q8TDN1 519 aa13.07□□□□□ -0.32
SLX4-203ENST00000486524 NUP133Q8WUM0 1156 aa13.07□□□□□ -0.32
SLX4-203ENST00000486524 KRT23Q9C075 422 aa13.07□□□□□ -0.32
SLX4-203ENST00000486524 FAM217BQ9NTX9 383 aaPredicted RBP13.07□□□□□ -0.32
SLX4-203ENST00000486524 POLR3EQ9NVU0 708 aa13.07□□□□□ -0.32
SLX4-203ENST00000486524 NRBP1Q9UHY1 535 aa13.07□□□□□ -0.32
SLX4-203ENST00000486524 GOLGA6L6A8MZA4 724 aa13.07□□□□□ -0.32
SLX4-203ENST00000486524 TRIM29Q14134 588 aa13.07□□□□□ -0.32
SLX4-203ENST00000486524 NOLC1Q14978 699 aaKnown RBP eCLIP13.07□□□□□ -0.32
SLX4-203ENST00000486524 CLEC4GQ6UXB4 293 aa13.07□□□□□ -0.32
SLX4-203ENST00000486524 FMR1NBQ8N0W7 255 aaPredicted RBP13.07□□□□□ -0.32
SLX4-203ENST00000486524 PIBF1Q8WXW3 757 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms