RNA–Protein interactions for RNA: ENST00000486427.1

LTN1-206, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-206ENST00000486427 TMC4Q7Z404 712 aa9.41□□□□□ -0.9
LTN1-206ENST00000486427 CEP44Q9C0F1 390 aa9.41□□□□□ -0.9
LTN1-206ENST00000486427 RAD18Q9NS91 495 aa9.41□□□□□ -0.9
LTN1-206ENST00000486427 TTF2Q9UNY4 1162 aaKnown RBP9.41□□□□□ -0.9
LTN1-206ENST00000486427 BMP6P22004 513 aa9.4□□□□□ -0.9
LTN1-206ENST00000486427 MFAP1P55081 439 aaKnown RBP9.4□□□□□ -0.9
LTN1-206ENST00000486427 XPCQ01831 940 aaPredicted RBP9.4□□□□□ -0.9
LTN1-206ENST00000486427 GRIN3AQ8TCU5 1115 aa9.4□□□□□ -0.9
LTN1-206ENST00000486427 KCNB2Q92953 911 aa9.4□□□□□ -0.9
LTN1-206ENST00000486427 HMX2A2RU54 273 aa9.39□□□□□ -0.91
LTN1-206ENST00000486427 CTSHP09668 335 aa9.39□□□□□ -0.91
LTN1-206ENST00000486427 ZNF252P-AS1Q0IIN9 211 aa9.39□□□□□ -0.91
LTN1-206ENST00000486427 MEI1Q5TIA1 1274 aa9.39□□□□□ -0.91
LTN1-206ENST00000486427 CDPF1Q6NVV7 123 aa9.39□□□□□ -0.91
LTN1-206ENST00000486427 MPRIPQ6WCQ1 1025 aa9.39□□□□□ -0.91
LTN1-206ENST00000486427 BCL2L13Q9BXK5 485 aa9.39□□□□□ -0.91
LTN1-206ENST00000486427 C7orf69Q9H7B7 122 aa9.39□□□□□ -0.91
LTN1-206ENST00000486427 STOML1Q9UBI4 398 aa9.39□□□□□ -0.91
LTN1-206ENST00000486427 PPP1R9AQ9ULJ8 1098 aa9.39□□□□□ -0.91
LTN1-206ENST00000486427 ACTL7BQ9Y614 415 aa9.39□□□□□ -0.91
LTN1-206ENST00000486427 FSTP19883 344 aa9.38□□□□□ -0.91
LTN1-206ENST00000486427 MAP1SQ66K74 1059 aaPredicted RBP9.38□□□□□ -0.91
LTN1-206ENST00000486427 TRIM42Q8IWZ5 723 aa9.38□□□□□ -0.91
LTN1-206ENST00000486427 KCNF1Q9H3M0 494 aa9.38□□□□□ -0.91
LTN1-206ENST00000486427 CBX8Q9HC52 389 aa9.38□□□□□ -0.91
LTN1-206ENST00000486427 KRT82Q9NSB4 513 aa9.38□□□□□ -0.91
LTN1-206ENST00000486427 AP4E1Q9UPM8 1137 aa9.38□□□□□ -0.91
LTN1-206ENST00000486427 HIF3AQ9Y2N7 669 aa9.38□□□□□ -0.91
LTN1-206ENST00000486427 MAP4P27816 1152 aaKnown RBP9.37□□□□□ -0.91
LTN1-206ENST00000486427 BEND4Q6ZU67 534 aa9.37□□□□□ -0.91
LTN1-206ENST00000486427 DYMQ7RTS9 669 aa9.37□□□□□ -0.91
LTN1-206ENST00000486427 GIPC2Q8TF65 315 aa9.37□□□□□ -0.91
LTN1-206ENST00000486427 FAM83CQ9BQN1 747 aa9.37□□□□□ -0.91
LTN1-206ENST00000486427 PCDHGC5Q9Y5F6 944 aa9.37□□□□□ -0.91
LTN1-206ENST00000486427 TMPRSS2O15393 492 aa9.36□□□□□ -0.91
LTN1-206ENST00000486427 KIF4BQ2VIQ3 1234 aa9.36□□□□□ -0.91
LTN1-206ENST00000486427 SV2BQ7L1I2 683 aa9.36□□□□□ -0.91
LTN1-206ENST00000486427 CLEC10AQ8IUN9 316 aa9.36□□□□□ -0.91
LTN1-206ENST00000486427 FBLIM1Q8WUP2 373 aa9.36□□□□□ -0.91
LTN1-206ENST00000486427 EMILIN2Q9BXX0 1053 aa9.36□□□□□ -0.91
LTN1-206ENST00000486427 KRTAP4-8Q9BYQ9 185 aa9.36□□□□□ -0.91
LTN1-206ENST00000486427 FAM105AQ9NUU6 356 aa9.36□□□□□ -0.91
LTN1-206ENST00000486427 CACNA2D2Q9NY47 1150 aa9.36□□□□□ -0.91
LTN1-206ENST00000486427 SYNGAP1Q96PV0 1343 aa9.35□□□□□ -0.91
LTN1-206ENST00000486427 USP11P51784 963 aa9.35□□□□□ -0.91
LTN1-206ENST00000486427 PCNX4Q63HM2 1172 aa9.35□□□□□ -0.91
LTN1-206ENST00000486427 GPBAR1Q8TDU6 330 aa9.35□□□□□ -0.91
LTN1-206ENST00000486427 GSX1Q9H4S2 264 aaPredicted RBP9.35□□□□□ -0.91
LTN1-206ENST00000486427 SORBS3O60504 671 aa9.34□□□□□ -0.91
LTN1-206ENST00000486427 RXRBP28702 533 aa9.34□□□□□ -0.91
LTN1-206ENST00000486427 CCDC85BQ15834 202 aaPredicted RBP9.34□□□□□ -0.91
LTN1-206ENST00000486427 CRIM1Q9NZV1 1036 aa9.34□□□□□ -0.91
LTN1-206ENST00000486427 SAMM50Q9Y512 469 aa9.34□□□□□ -0.91
LTN1-206ENST00000486427 IGLV1-40P01703 118 aa9.33□□□□□ -0.92
LTN1-206ENST00000486427 RAB6AP20340 208 aa9.33□□□□□ -0.92
LTN1-206ENST00000486427 ASPAP45381 313 aa9.33□□□□□ -0.92
LTN1-206ENST00000486427 ID3Q02535 119 aa9.33□□□□□ -0.92
LTN1-206ENST00000486427 LLGL2Q6P1M3 1020 aa9.33□□□□□ -0.92
LTN1-206ENST00000486427 VTI1BQ9UEU0 232 aa9.33□□□□□ -0.92
LTN1-206ENST00000486427 SLFN14P0C7P3 912 aa9.32□□□□□ -0.92
LTN1-206ENST00000486427 NFIAQ12857 509 aa9.32□□□□□ -0.92
LTN1-206ENST00000486427 RNF43Q68DV7 783 aa9.32□□□□□ -0.92
LTN1-206ENST00000486427 TTBK2Q6IQ55 1244 aa9.32□□□□□ -0.92
LTN1-206ENST00000486427 EZH1Q92800 747 aaPredicted RBP9.32□□□□□ -0.92
LTN1-206ENST00000486427 FANCD2OSQ96PS1 177 aa9.32□□□□□ -0.92
LTN1-206ENST00000486427 ACSS3Q9H6R3 686 aa9.32□□□□□ -0.92
LTN1-206ENST00000486427 MRS2Q9HD23 443 aa9.32□□□□□ -0.92
LTN1-206ENST00000486427 FAM95CA0A1B0GW59 222 aa9.31□□□□□ -0.92
LTN1-206ENST00000486427 TRIM37O94972 964 aa9.31□□□□□ -0.92
LTN1-206ENST00000486427 NFICP08651 508 aa9.31□□□□□ -0.92
LTN1-206ENST00000486427 PTPN11Q06124 597 aaPredicted RBP9.31□□□□□ -0.92
LTN1-206ENST00000486427 TAF1CQ15572 869 aaPredicted RBP9.31□□□□□ -0.92
LTN1-206ENST00000486427 MAP3K11Q16584 847 aa9.31□□□□□ -0.92
LTN1-206ENST00000486427 ACSBG1Q96GR2 724 aa9.31□□□□□ -0.92
LTN1-206ENST00000486427 CRELD1Q96HD1 420 aa9.31□□□□□ -0.92
LTN1-206ENST00000486427 SEMA6CQ9H3T2 930 aa9.31□□□□□ -0.92
LTN1-206ENST00000486427 DISC1Q9NRI5 854 aa9.31□□□□□ -0.92
LTN1-206ENST00000486427 USP31Q70CQ4 1352 aa9.31□□□□□ -0.92
LTN1-206ENST00000486427 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.3□□□□□ -0.92
LTN1-206ENST00000486427 ZNF16P17020 682 aaPredicted RBP9.3□□□□□ -0.92
LTN1-206ENST00000486427 ST13P50502 369 aaKnown RBP9.3□□□□□ -0.92
LTN1-206ENST00000486427 LRRC14Q15048 493 aa9.3□□□□□ -0.92
LTN1-206ENST00000486427 NFKBIBQ15653 356 aa9.3□□□□□ -0.92
LTN1-206ENST00000486427 ZNF326Q5BKZ1 582 aaKnown RBP9.3□□□□□ -0.92
LTN1-206ENST00000486427 ZC3H12AQ5D1E8 599 aaKnown RBP9.3□□□□□ -0.92
LTN1-206ENST00000486427 SHISA5Q8N114 240 aa9.3□□□□□ -0.92
LTN1-206ENST00000486427 CYP8B1Q9UNU6 501 aa9.3□□□□□ -0.92
LTN1-206ENST00000486427 ZMYM1Q5SVZ6 1142 aa9.29□□□□□ -0.92
LTN1-206ENST00000486427 PAOXQ6QHF9 649 aa9.29□□□□□ -0.92
LTN1-206ENST00000486427 GAL3ST3Q96A11 431 aa9.29□□□□□ -0.92
LTN1-206ENST00000486427 DBNDD2Q9BQY9 259 aa9.29□□□□□ -0.92
LTN1-206ENST00000486427 GSC2O15499 205 aa9.28□□□□□ -0.92
LTN1-206ENST00000486427 DYNC1LI2O43237 492 aaPredicted RBP9.28□□□□□ -0.92
LTN1-206ENST00000486427 LIG3P49916 1009 aa9.28□□□□□ -0.92
LTN1-206ENST00000486427 MRPL58Q14197 206 aaKnown RBP9.28□□□□□ -0.92
LTN1-206ENST00000486427 ZDHHC13Q8IUH4 622 aa9.28□□□□□ -0.92
LTN1-206ENST00000486427 MFSD14AQ96MC6 490 aa9.28□□□□□ -0.92
LTN1-206ENST00000486427 YIPF2Q9BWQ6 316 aa9.28□□□□□ -0.92
LTN1-206ENST00000486427 ATXN3LQ9H3M9 355 aa9.28□□□□□ -0.92
LTN1-206ENST00000486427 PRKAG2Q9UGJ0 569 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms