RNA–Protein interactions for RNA: ENST00000486417.5

TMC1-204, Transcript of transmembrane channel like 1, humanhuman

TSL 2

Gene TMC1, Length 1,528 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-204ENST00000486417 SNX14Q9Y5W7 946 aa8.69□□□□□ -1.02
TMC1-204ENST00000486417 MROH5Q6ZUA9 1318 aa8.68□□□□□ -1.02
TMC1-204ENST00000486417 LAMA4Q16363 1823 aa8.68□□□□□ -1.02
TMC1-204ENST00000486417 CCDC152Q4G0S7 254 aa8.68□□□□□ -1.02
TMC1-204ENST00000486417 TTC39AQ5SRH9 613 aa8.68□□□□□ -1.02
TMC1-204ENST00000486417 MORN1Q5T089 497 aa8.68□□□□□ -1.02
TMC1-204ENST00000486417 TBC1D9BQ66K14 1250 aa8.68□□□□□ -1.02
TMC1-204ENST00000486417 AMIGO3Q86WK7 504 aa8.68□□□□□ -1.02
TMC1-204ENST00000486417 ADAMTS19Q8TE59 1207 aa8.68□□□□□ -1.02
TMC1-204ENST00000486417 GZF1Q9H116 711 aaPredicted RBP8.68□□□□□ -1.02
TMC1-204ENST00000486417 SRP68Q9UHB9 627 aaKnown RBP8.68□□□□□ -1.02
TMC1-204ENST00000486417 SLC27A5Q9Y2P5 690 aa8.68□□□□□ -1.02
TMC1-204ENST00000486417 RTCBQ9Y3I0 505 aaKnown RBP8.68□□□□□ -1.02
TMC1-204ENST00000486417 RGPD3A6NKT7 1758 aaPredicted RBP8.68□□□□□ -1.02
TMC1-204ENST00000486417 RGPD4Q7Z3J3 1758 aa8.68□□□□□ -1.02
TMC1-204ENST00000486417 GOLIM4O00461 696 aa8.67□□□□□ -1.02
TMC1-204ENST00000486417 SOCS7O14512 581 aa8.67□□□□□ -1.02
TMC1-204ENST00000486417 MCM2P49736 904 aa8.67□□□□□ -1.02
TMC1-204ENST00000486417 NEK4P51957 841 aa8.67□□□□□ -1.02
TMC1-204ENST00000486417 LSM11P83369 360 aaKnown RBP eCLIP8.67□□□□□ -1.02
TMC1-204ENST00000486417 ERFEQ4G0M1 354 aa8.67□□□□□ -1.02
TMC1-204ENST00000486417 CCDC158Q5M9N0 1113 aa8.67□□□□□ -1.02
TMC1-204ENST00000486417 GORABQ5T7V8 394 aa8.67□□□□□ -1.02
TMC1-204ENST00000486417 FAM196AQ6ZSG2 479 aa8.67□□□□□ -1.02
TMC1-204ENST00000486417 KRT27Q7Z3Y8 459 aa8.67□□□□□ -1.02
TMC1-204ENST00000486417 ZNF589Q86UQ0 364 aaPredicted RBP8.67□□□□□ -1.02
TMC1-204ENST00000486417 TICAM2Q86XR7 235 aa8.67□□□□□ -1.02
TMC1-204ENST00000486417 KCNB2Q92953 911 aa8.67□□□□□ -1.02
TMC1-204ENST00000486417 SEC31BQ9NQW1 1179 aa8.67□□□□□ -1.02
TMC1-204ENST00000486417 RBM8AQ9Y5S9 174 aaKnown RBP8.67□□□□□ -1.02
TMC1-204ENST00000486417 MYH13Q9UKX3 1938 aa8.67□□□□□ -1.02
TMC1-204ENST00000486417 TK2O00142 265 aa8.66□□□□□ -1.02
TMC1-204ENST00000486417 ZPR1O75312 459 aa8.66□□□□□ -1.02
TMC1-204ENST00000486417 PDE8BO95263 885 aa8.66□□□□□ -1.02
TMC1-204ENST00000486417 CHGBP05060 677 aa8.66□□□□□ -1.02
TMC1-204ENST00000486417 HSP90AA1P07900 732 aaKnown RBP8.66□□□□□ -1.02
TMC1-204ENST00000486417 FGFR2P21802 821 aa8.66□□□□□ -1.02
TMC1-204ENST00000486417 NECTIN1Q15223 517 aa8.66□□□□□ -1.02
TMC1-204ENST00000486417 PRPF40BQ6NWY9 871 aaKnown RBP8.66□□□□□ -1.02
TMC1-204ENST00000486417 BICDL1Q6ZP65 573 aa8.66□□□□□ -1.02
TMC1-204ENST00000486417 PRR7Q8TB68 274 aa8.66□□□□□ -1.02
TMC1-204ENST00000486417 MAP4K1Q92918 833 aa8.66□□□□□ -1.02
TMC1-204ENST00000486417 NYXQ9GZU5 481 aa8.66□□□□□ -1.02
TMC1-204ENST00000486417 LRRC4BQ9NT99 713 aa8.66□□□□□ -1.02
TMC1-204ENST00000486417 FRAT2O75474 233 aaPredicted RBP8.65□□□□□ -1.02
TMC1-204ENST00000486417 IGHMBP2P38935 993 aaKnown RBP8.65□□□□□ -1.02
TMC1-204ENST00000486417 BCAMP50895 628 aa8.65□□□□□ -1.02
TMC1-204ENST00000486417 SCARF1Q14162 830 aa8.65□□□□□ -1.02
TMC1-204ENST00000486417 PUM3Q15397 648 aaKnown RBP8.65□□□□□ -1.02
TMC1-204ENST00000486417 CREB3L3Q68CJ9 461 aa8.65□□□□□ -1.02
TMC1-204ENST00000486417 BLOC1S3Q6QNY0 202 aa8.65□□□□□ -1.02
TMC1-204ENST00000486417 RNF19BQ6ZMZ0 732 aa8.65□□□□□ -1.02
TMC1-204ENST00000486417 GLMNQ92990 594 aa8.65□□□□□ -1.02
TMC1-204ENST00000486417 ZNF512BQ96KM6 892 aaPredicted RBP8.65□□□□□ -1.02
TMC1-204ENST00000486417 MPHOSPH8Q99549 860 aa8.65□□□□□ -1.02
TMC1-204ENST00000486417 UPF3BQ9BZI7 483 aaKnown RBP8.65□□□□□ -1.02
TMC1-204ENST00000486417 RPAP1Q9BWH6 1393 aaPredicted RBP8.65□□□□□ -1.02
TMC1-204ENST00000486417 MAST2Q6P0Q8 1798 aa8.65□□□□□ -1.03
TMC1-204ENST00000486417 SLC27A2O14975 620 aa8.64□□□□□ -1.03
TMC1-204ENST00000486417 RNF113AO15541 343 aaKnown RBP8.64□□□□□ -1.03
TMC1-204ENST00000486417 TAF5LO75529 589 aa8.64□□□□□ -1.03
TMC1-204ENST00000486417 ARID4AP29374 1257 aaPredicted RBP8.64□□□□□ -1.03
TMC1-204ENST00000486417 MCAMP43121 646 aa8.64□□□□□ -1.03
TMC1-204ENST00000486417 ZAP70P43403 619 aa8.64□□□□□ -1.03
TMC1-204ENST00000486417 KCNJ4P48050 445 aa8.64□□□□□ -1.03
TMC1-204ENST00000486417 RBM6P78332 1123 aaKnown RBP8.64□□□□□ -1.03
TMC1-204ENST00000486417 SF3B3Q15393 1217 aaKnown RBP8.64□□□□□ -1.03
TMC1-204ENST00000486417 NR6A1Q15406 480 aa8.64□□□□□ -1.03
TMC1-204ENST00000486417 MCMDC2Q4G0Z9 681 aa8.64□□□□□ -1.03
TMC1-204ENST00000486417 SLC27A3Q5K4L6 730 aa8.64□□□□□ -1.03
TMC1-204ENST00000486417 SLC10A5Q5PT55 438 aa8.64□□□□□ -1.03
TMC1-204ENST00000486417 ZMYM1Q5SVZ6 1142 aa8.64□□□□□ -1.03
TMC1-204ENST00000486417 ZNF772Q68DY9 489 aaPredicted RBP8.64□□□□□ -1.03
TMC1-204ENST00000486417 CCDC129Q6ZRS4 1044 aa8.64□□□□□ -1.03
TMC1-204ENST00000486417 LPIN2Q92539 896 aa8.64□□□□□ -1.03
TMC1-204ENST00000486417 LRCH3Q96II8 777 aa8.64□□□□□ -1.03
TMC1-204ENST00000486417 TTC14Q96N46 770 aa8.64□□□□□ -1.03
TMC1-204ENST00000486417 SETDB2Q96T68 719 aa8.64□□□□□ -1.03
TMC1-204ENST00000486417 SEC62Q99442 399 aaKnown RBP8.64□□□□□ -1.03
TMC1-204ENST00000486417 CDC5LQ99459 802 aaKnown RBP8.64□□□□□ -1.03
TMC1-204ENST00000486417 HELLSQ9NRZ9 838 aa8.64□□□□□ -1.03
TMC1-204ENST00000486417 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.64□□□□□ -1.03
TMC1-204ENST00000486417 CARMIL3Q8ND23 1372 aa8.64□□□□□ -1.03
TMC1-204ENST00000486417 MAST3O60307 1309 aa8.64□□□□□ -1.03
TMC1-204ENST00000486417 ACTN4O43707 911 aaKnown RBP8.64□□□□□ -1.03
TMC1-204ENST00000486417 TRIM37O94972 964 aa8.64□□□□□ -1.03
TMC1-204ENST00000486417 UQCRFS1P1P0C7P4 283 aa8.64□□□□□ -1.03
TMC1-204ENST00000486417 SLC5A1P13866 664 aa8.64□□□□□ -1.03
TMC1-204ENST00000486417 CASTP20810 708 aaKnown RBP8.64□□□□□ -1.03
TMC1-204ENST00000486417 SSFA2P28290 1259 aa8.64□□□□□ -1.03
TMC1-204ENST00000486417 RFC4P35249 363 aa8.64□□□□□ -1.03
TMC1-204ENST00000486417 PHKA1P46020 1223 aa8.64□□□□□ -1.03
TMC1-204ENST00000486417 APLP1P51693 650 aa8.64□□□□□ -1.03
TMC1-204ENST00000486417 FKBP4Q02790 459 aaKnown RBP eCLIP8.64□□□□□ -1.03
TMC1-204ENST00000486417 VAC14Q08AM6 782 aa8.64□□□□□ -1.03
TMC1-204ENST00000486417 CUL4AQ13619 759 aa8.64□□□□□ -1.03
TMC1-204ENST00000486417 TRAPPC3LQ5T215 181 aa8.64□□□□□ -1.03
TMC1-204ENST00000486417 PI16Q6UXB8 463 aa8.64□□□□□ -1.03
TMC1-204ENST00000486417 NBPF5PQ86XG9 351 aaPredicted RBP8.64□□□□□ -1.03
TMC1-204ENST00000486417 HELBQ8NG08 1087 aaPredicted RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms