RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 RBM26Q5T8P6 1007 aaKnown RBP17.4■□□□□ 0.38
POLR2J3-204ENST00000486319 GMLQ99445 158 aa17.4■□□□□ 0.38
POLR2J3-204ENST00000486319 ZSWIM6Q9HCJ5 1215 aa17.4■□□□□ 0.38
POLR2J3-204ENST00000486319 USP17L8P0C7I0 530 aa17.39■□□□□ 0.37
POLR2J3-204ENST00000486319 CASTP20810 708 aaKnown RBP17.39■□□□□ 0.37
POLR2J3-204ENST00000486319 ADD2P35612 726 aa17.39■□□□□ 0.37
POLR2J3-204ENST00000486319 BCAMP50895 628 aa17.39■□□□□ 0.37
POLR2J3-204ENST00000486319 RASGRF1Q13972 1273 aa17.39■□□□□ 0.37
POLR2J3-204ENST00000486319 UBE3CQ15386 1083 aa17.39■□□□□ 0.37
POLR2J3-204ENST00000486319 ZC3H15Q8WU90 426 aaKnown RBP17.39■□□□□ 0.37
POLR2J3-204ENST00000486319 JAKMIP1Q96N16 626 aaKnown RBP17.39■□□□□ 0.37
POLR2J3-204ENST00000486319 MXD3Q9BW11 206 aa17.39■□□□□ 0.37
POLR2J3-204ENST00000486319 CYP46A1Q9Y6A2 500 aa17.39■□□□□ 0.37
POLR2J3-204ENST00000486319 PASKQ96RG2 1323 aa17.39■□□□□ 0.37
POLR2J3-204ENST00000486319 IL1R1P14778 569 aa17.38■□□□□ 0.37
POLR2J3-204ENST00000486319 HIBADHP31937 336 aaKnown RBP17.38■□□□□ 0.37
POLR2J3-204ENST00000486319 GYG1P46976 350 aa17.38■□□□□ 0.37
POLR2J3-204ENST00000486319 VPS37DQ86XT2 251 aa17.38■□□□□ 0.37
POLR2J3-204ENST00000486319 OSBP2Q969R2 916 aa17.38■□□□□ 0.37
POLR2J3-204ENST00000486319 TTC14Q96N46 770 aa17.38■□□□□ 0.37
POLR2J3-204ENST00000486319 PGAP2Q9UHJ9 254 aa17.38■□□□□ 0.37
POLR2J3-204ENST00000486319 RPAP1Q9BWH6 1393 aaPredicted RBP17.38■□□□□ 0.37
POLR2J3-204ENST00000486319 MYO3BQ8WXR4 1341 aa17.38■□□□□ 0.37
POLR2J3-204ENST00000486319 LAMA4Q16363 1823 aa17.38■□□□□ 0.37
POLR2J3-204ENST00000486319 SCN9AQ15858 1988 aa17.37■□□□□ 0.37
POLR2J3-204ENST00000486319 M0R2C6 588 aa17.37■□□□□ 0.37
POLR2J3-204ENST00000486319 EGFRP00533 1210 aa17.37■□□□□ 0.37
POLR2J3-204ENST00000486319 ZNF280AP59817 542 aaPredicted RBP17.37■□□□□ 0.37
POLR2J3-204ENST00000486319 NBR1Q14596 966 aa17.37■□□□□ 0.37
POLR2J3-204ENST00000486319 KIF4BQ2VIQ3 1234 aa17.37■□□□□ 0.37
POLR2J3-204ENST00000486319 SLC9C2Q5TAH2 1124 aa17.37■□□□□ 0.37
POLR2J3-204ENST00000486319 VPS53Q5VIR6 699 aa17.37■□□□□ 0.37
POLR2J3-204ENST00000486319 RUFY3Q7L099 469 aa17.37■□□□□ 0.37
POLR2J3-204ENST00000486319 OGFOD1Q8N543 542 aa17.37■□□□□ 0.37
POLR2J3-204ENST00000486319 TMX3Q96JJ7 454 aa17.37■□□□□ 0.37
POLR2J3-204ENST00000486319 FAM84BQ96KN1 310 aaPredicted RBP17.37■□□□□ 0.37
POLR2J3-204ENST00000486319 CWC22Q9HCG8 908 aaKnown RBP17.37■□□□□ 0.37
POLR2J3-204ENST00000486319 PIH1D3Q9NQM4 214 aaKnown RBP17.37■□□□□ 0.37
POLR2J3-204ENST00000486319 IDH1O75874 414 aaKnown RBP17.37■□□□□ 0.37
POLR2J3-204ENST00000486319 HSPD1P10809 573 aaKnown RBP17.37■□□□□ 0.37
POLR2J3-204ENST00000486319 MAP3K12Q12852 859 aa17.37■□□□□ 0.37
POLR2J3-204ENST00000486319 ADCK5Q3MIX3 580 aa17.37■□□□□ 0.37
POLR2J3-204ENST00000486319 SLFNL1Q499Z3 407 aa17.37■□□□□ 0.37
POLR2J3-204ENST00000486319 SEMA3EO15041 775 aa17.36■□□□□ 0.37
POLR2J3-204ENST00000486319 CUL4AQ13619 759 aa17.36■□□□□ 0.37
POLR2J3-204ENST00000486319 NFKBIBQ15653 356 aa17.36■□□□□ 0.37
POLR2J3-204ENST00000486319 MYOZ2Q9NPC6 264 aa17.36■□□□□ 0.37
POLR2J3-204ENST00000486319 FOXD4L1Q9NU39 408 aa17.36■□□□□ 0.37
POLR2J3-204ENST00000486319 PDRG1Q9NUG6 133 aa17.36■□□□□ 0.37
POLR2J3-204ENST00000486319 CTNNA3Q9UI47 895 aa17.36■□□□□ 0.37
POLR2J3-204ENST00000486319 ADAMTSL1Q8N6G6 1762 aa17.36■□□□□ 0.37
POLR2J3-204ENST00000486319 BLOC1S2Q6QNY1 142 aa17.35■□□□□ 0.37
POLR2J3-204ENST00000486319 FBXO33Q7Z6M2 555 aa17.35■□□□□ 0.37
POLR2J3-204ENST00000486319 DNAJC5GQ8N7S2 189 aa17.35■□□□□ 0.37
POLR2J3-204ENST00000486319 TDRD7Q8NHU6 1098 aaKnown RBP17.35■□□□□ 0.37
POLR2J3-204ENST00000486319 INTS4Q96HW7 963 aaKnown RBP17.35■□□□□ 0.37
POLR2J3-204ENST00000486319 CREBZFQ9NS37 354 aa17.35■□□□□ 0.37
POLR2J3-204ENST00000486319 DENND2AQ9ULE3 1009 aa17.35■□□□□ 0.37
POLR2J3-204ENST00000486319 TMEM88BA6NKF7 163 aa17.34■□□□□ 0.37
POLR2J3-204ENST00000486319 ZBTB22O15209 634 aa17.34■□□□□ 0.37
POLR2J3-204ENST00000486319 FRAT2O75474 233 aaPredicted RBP17.34■□□□□ 0.37
POLR2J3-204ENST00000486319 CYP21A2P08686 494 aa17.34■□□□□ 0.37
POLR2J3-204ENST00000486319 PDE6AP16499 860 aa17.34■□□□□ 0.37
POLR2J3-204ENST00000486319 MMP14P50281 582 aa17.34■□□□□ 0.37
POLR2J3-204ENST00000486319 AK2P54819 239 aa17.34■□□□□ 0.37
POLR2J3-204ENST00000486319 CDC37L1Q7L3B6 337 aa17.34■□□□□ 0.37
POLR2J3-204ENST00000486319 KIAA0825Q8IV33 1275 aa17.34■□□□□ 0.37
POLR2J3-204ENST00000486319 PUS7LQ9H0K6 701 aaKnown RBP17.34■□□□□ 0.37
POLR2J3-204ENST00000486319 HDAC9Q9UKV0 1011 aa17.34■□□□□ 0.37
POLR2J3-204ENST00000486319 LIMCH1Q9UPQ0 1083 aa17.34■□□□□ 0.37
POLR2J3-204ENST00000486319 JAG2Q9Y219 1238 aa17.34■□□□□ 0.37
POLR2J3-204ENST00000486319 ZNF532Q9HCE3 1301 aa17.34■□□□□ 0.37
POLR2J3-204ENST00000486319 TRAF5O00463 557 aa17.33■□□□□ 0.37
POLR2J3-204ENST00000486319 GPAA1O43292 621 aa17.33■□□□□ 0.37
POLR2J3-204ENST00000486319 DCPSQ96C86 337 aaKnown RBP17.33■□□□□ 0.37
POLR2J3-204ENST00000486319 ZSCAN31Q96LW9 406 aaPredicted RBP17.33■□□□□ 0.37
POLR2J3-204ENST00000486319 GLIS2Q9BZE0 524 aaPredicted RBP17.33■□□□□ 0.37
POLR2J3-204ENST00000486319 ALDH8A1Q9H2A2 487 aaPredicted RBP17.33■□□□□ 0.37
POLR2J3-204ENST00000486319 PDS5AQ29RF7 1337 aaKnown RBP17.33■□□□□ 0.36
POLR2J3-204ENST00000486319 TCRBV5S4A2TA0A5A2 114 aa17.32■□□□□ 0.36
POLR2J3-204ENST00000486319 HMGB1P09429 215 aaKnown RBP17.32■□□□□ 0.36
POLR2J3-204ENST00000486319 RPS6KB1P23443 525 aa17.32■□□□□ 0.36
POLR2J3-204ENST00000486319 FMR1Q06787 632 aaKnown RBP eCLIP17.32■□□□□ 0.36
POLR2J3-204ENST00000486319 ANKRD1Q15327 319 aa17.32■□□□□ 0.36
POLR2J3-204ENST00000486319 CERS5Q8N5B7 392 aa17.32■□□□□ 0.36
POLR2J3-204ENST00000486319 NEK1Q96PY6 1258 aa17.32■□□□□ 0.36
POLR2J3-204ENST00000486319 CPA1P15085 419 aa17.31■□□□□ 0.36
POLR2J3-204ENST00000486319 FKBP1AP62942 108 aaKnown RBP17.31■□□□□ 0.36
POLR2J3-204ENST00000486319 NUCB2P80303 420 aa17.31■□□□□ 0.36
POLR2J3-204ENST00000486319 NOL8Q76FK4 1167 aaKnown RBP17.31■□□□□ 0.36
POLR2J3-204ENST00000486319 KRT26Q7Z3Y9 468 aa17.31■□□□□ 0.36
POLR2J3-204ENST00000486319 USP48Q86UV5 1035 aa17.31■□□□□ 0.36
POLR2J3-204ENST00000486319 LRP2BPQ9P2M1 347 aa17.31■□□□□ 0.36
POLR2J3-204ENST00000486319 IQSEC3Q9UPP2 1182 aaPredicted RBP17.31■□□□□ 0.36
POLR2J3-204ENST00000486319 FAM205AQ6ZU69 1335 aa17.31■□□□□ 0.36
POLR2J3-204ENST00000486319 F8W031 263 aaPredicted RBP17.31■□□□□ 0.36
POLR2J3-204ENST00000486319 RAB3GAP1Q15042 981 aa17.31■□□□□ 0.36
POLR2J3-204ENST00000486319 MFSD14BQ5SR56 506 aa17.31■□□□□ 0.36
POLR2J3-204ENST00000486319 MAGEB6Q8N7X4 407 aa17.31■□□□□ 0.36
POLR2J3-204ENST00000486319 KLRG1Q96E93 195 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms