RNA–Protein interactions for RNA: ENST00000485591.1

COL6A2-208, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-208ENST00000485591 TCRBV5S4A2TA0A5A2 114 aa24.1■■□□□ 1.45
COL6A2-208ENST00000485591 BTDP43251 543 aa24.1■■□□□ 1.45
COL6A2-208ENST00000485591 CHADLQ6NUI6 762 aa24.1■■□□□ 1.45
COL6A2-208ENST00000485591 SKAP1Q86WV1 359 aa24.1■■□□□ 1.45
COL6A2-208ENST00000485591 CNTROBQ8N137 903 aa24.1■■□□□ 1.45
COL6A2-208ENST00000485591 FSD1Q9BTV5 496 aa24.1■■□□□ 1.45
COL6A2-208ENST00000485591 RFX7Q2KHR2 1363 aa24.1■■□□□ 1.45
COL6A2-208ENST00000485591 ZNF532Q9HCE3 1301 aa24.1■■□□□ 1.45
COL6A2-208ENST00000485591 TRIM6-TRIM34B2RNG4 842 aa24.09■■□□□ 1.45
COL6A2-208ENST00000485591 UBE3CQ15386 1083 aa24.09■■□□□ 1.45
COL6A2-208ENST00000485591 LRRFIP1Q32MZ4 808 aaKnown RBP24.09■■□□□ 1.45
COL6A2-208ENST00000485591 SMC1BQ8NDV3 1235 aa24.09■■□□□ 1.45
COL6A2-208ENST00000485591 DCPSQ96C86 337 aaKnown RBP24.09■■□□□ 1.45
COL6A2-208ENST00000485591 ZNF70Q9UC06 446 aaPredicted RBP24.09■■□□□ 1.45
COL6A2-208ENST00000485591 CLRN2A0PK11 232 aa24.08■■□□□ 1.45
COL6A2-208ENST00000485591 ZFYP08048 801 aaPredicted RBP24.08■■□□□ 1.45
COL6A2-208ENST00000485591 GSPT1P15170 499 aaKnown RBP24.08■■□□□ 1.45
COL6A2-208ENST00000485591 MAP1SQ66K74 1059 aaPredicted RBP24.08■■□□□ 1.45
COL6A2-208ENST00000485591 CDC42EP5Q6NZY7 148 aa24.08■■□□□ 1.45
COL6A2-208ENST00000485591 TICAM2Q86XR7 235 aa24.08■■□□□ 1.45
COL6A2-208ENST00000485591 APOBEC3FQ8IUX4 373 aaKnown RBP24.08■■□□□ 1.45
COL6A2-208ENST00000485591 NOL10Q9BSC4 688 aaKnown RBP24.08■■□□□ 1.45
COL6A2-208ENST00000485591 BAG3O95817 575 aa24.07■■□□□ 1.44
COL6A2-208ENST00000485591 PPP4CP60510 307 aa24.07■■□□□ 1.44
COL6A2-208ENST00000485591 CERS3Q8IU89 383 aa24.07■■□□□ 1.44
COL6A2-208ENST00000485591 TMOD2Q9NZR1 351 aa24.07■■□□□ 1.44
COL6A2-208ENST00000485591 RNF113AO15541 343 aaKnown RBP24.06■■□□□ 1.44
COL6A2-208ENST00000485591 RGS3P49796 1198 aa24.06■■□□□ 1.44
COL6A2-208ENST00000485591 RHBDL3P58872 404 aa24.06■■□□□ 1.44
COL6A2-208ENST00000485591 RILPL2Q969X0 211 aa24.06■■□□□ 1.44
COL6A2-208ENST00000485591 VEZTQ9HBM0 779 aa24.06■■□□□ 1.44
COL6A2-208ENST00000485591 USP40Q9NVE5 1235 aa24.06■■□□□ 1.44
COL6A2-208ENST00000485591 AATFQ9NY61 560 aaKnown RBP eCLIP24.06■■□□□ 1.44
COL6A2-208ENST00000485591 TRPM7Q96QT4 1865 aa24.05■■□□□ 1.44
COL6A2-208ENST00000485591 CHGBP05060 677 aa24.05■■□□□ 1.44
COL6A2-208ENST00000485591 PLCG2P16885 1265 aa24.05■■□□□ 1.44
COL6A2-208ENST00000485591 FKBP1CQ5VVH2 108 aa24.05■■□□□ 1.44
COL6A2-208ENST00000485591 CDC37L1Q7L3B6 337 aa24.05■■□□□ 1.44
COL6A2-208ENST00000485591 SULF1Q8IWU6 871 aa24.05■■□□□ 1.44
COL6A2-208ENST00000485591 FSTL1Q12841 308 aa24.04■■□□□ 1.44
COL6A2-208ENST00000485591 TNFAIP1Q13829 316 aa24.04■■□□□ 1.44
COL6A2-208ENST00000485591 SLFNL1Q499Z3 407 aa24.04■■□□□ 1.44
COL6A2-208ENST00000485591 KRT26Q7Z3Y9 468 aa24.04■■□□□ 1.44
COL6A2-208ENST00000485591 MIGA1Q8NAN2 632 aa24.04■■□□□ 1.44
COL6A2-208ENST00000485591 APPBP2Q92624 585 aa24.04■■□□□ 1.44
COL6A2-208ENST00000485591 RIOK1Q9BRS2 568 aaKnown RBP24.04■■□□□ 1.44
COL6A2-208ENST00000485591 SDSP20132 328 aa24.03■■□□□ 1.44
COL6A2-208ENST00000485591 CACNB3P54284 484 aa24.03■■□□□ 1.44
COL6A2-208ENST00000485591 IDI2Q9BXS1 227 aa24.03■■□□□ 1.44
COL6A2-208ENST00000485591 GLIS2Q9BZE0 524 aaPredicted RBP24.03■■□□□ 1.44
COL6A2-208ENST00000485591 GTF3C3Q9Y5Q9 886 aa24.03■■□□□ 1.44
COL6A2-208ENST00000485591 NAV1Q8NEY1 1877 aa24.02■■□□□ 1.44
COL6A2-208ENST00000485591 MAGEB6P1A0A0J9YX57 407 aa24.02■■□□□ 1.44
COL6A2-208ENST00000485591 ADM5C9JUS6 153 aa24.02■■□□□ 1.44
COL6A2-208ENST00000485591 WDHD1O75717 1129 aaPredicted RBP24.02■■□□□ 1.44
COL6A2-208ENST00000485591 ITGBL1O95965 494 aaPredicted RBP24.02■■□□□ 1.44
COL6A2-208ENST00000485591 DYNLL1P63167 89 aaKnown RBP24.02■■□□□ 1.44
COL6A2-208ENST00000485591 SH3RF3Q8TEJ3 882 aaPredicted RBP24.02■■□□□ 1.44
COL6A2-208ENST00000485591 PPP2R3BQ9Y5P8 575 aa24.02■■□□□ 1.44
COL6A2-208ENST00000485591 CNTNAP1P78357 1384 aa24.02■■□□□ 1.44
COL6A2-208ENST00000485591 DDX60LQ5H9U9 1706 aaKnown RBP24.01■■□□□ 1.43
COL6A2-208ENST00000485591 TCP10L2B9ZVM9 353 aa24.01■■□□□ 1.43
COL6A2-208ENST00000485591 TNNI2P48788 182 aa24.01■■□□□ 1.43
COL6A2-208ENST00000485591 BMP2KLQ5H9B9 411 aa24.01■■□□□ 1.43
COL6A2-208ENST00000485591 ZMYM1Q5SVZ6 1142 aa24.01■■□□□ 1.43
COL6A2-208ENST00000485591 USP48Q86UV5 1035 aa24.01■■□□□ 1.43
COL6A2-208ENST00000485591 FAM83AQ86UY5 434 aa24.01■■□□□ 1.43
COL6A2-208ENST00000485591 TEX11Q8IYF3 940 aa24.01■■□□□ 1.43
COL6A2-208ENST00000485591 SCAF8Q9UPN6 1271 aaKnown RBP24.01■■□□□ 1.43
COL6A2-208ENST00000485591 NPM3O75607 178 aaKnown RBP24■■□□□ 1.43
COL6A2-208ENST00000485591 NFIAQ12857 509 aa24■■□□□ 1.43
COL6A2-208ENST00000485591 PUS7LQ9H0K6 701 aaKnown RBP24■■□□□ 1.43
COL6A2-208ENST00000485591 DEFB129Q9H1M3 183 aa24■■□□□ 1.43
COL6A2-208ENST00000485591 RPAP1Q9BWH6 1393 aaPredicted RBP24■■□□□ 1.43
COL6A2-208ENST00000485591 MYH1P12882 1939 aa24■■□□□ 1.43
COL6A2-208ENST00000485591 MBD4O95243 580 aa23.99■■□□□ 1.43
COL6A2-208ENST00000485591 RASA3Q14644 834 aa23.99■■□□□ 1.43
COL6A2-208ENST00000485591 LCORLQ8N3X6 602 aa23.99■■□□□ 1.43
COL6A2-208ENST00000485591 OSBP2Q969R2 916 aa23.99■■□□□ 1.43
COL6A2-208ENST00000485591 FAM198AQ9UFP1 575 aa23.99■■□□□ 1.43
COL6A2-208ENST00000485591 PASKQ96RG2 1323 aa23.99■■□□□ 1.43
COL6A2-208ENST00000485591 COL2A1P02458 1487 aaPredicted RBP23.99■■□□□ 1.43
COL6A2-208ENST00000485591 HIP1O00291 1037 aa23.98■■□□□ 1.43
COL6A2-208ENST00000485591 ENTPD3O75355 529 aa23.98■■□□□ 1.43
COL6A2-208ENST00000485591 FAM151AQ8WW52 585 aa23.98■■□□□ 1.43
COL6A2-208ENST00000485591 AIDAQ96BJ3 306 aa23.98■■□□□ 1.43
COL6A2-208ENST00000485591 ARMT1Q9H993 441 aa23.98■■□□□ 1.43
COL6A2-208ENST00000485591 M0R2C6 588 aa23.97■■□□□ 1.43
COL6A2-208ENST00000485591 TRAF5O00463 557 aa23.97■■□□□ 1.43
COL6A2-208ENST00000485591 CDCA5Q96FF9 252 aa23.97■■□□□ 1.43
COL6A2-208ENST00000485591 CRNKL1Q9BZJ0 848 aaKnown RBP23.97■■□□□ 1.43
COL6A2-208ENST00000485591 DDX4Q9NQI0 724 aaKnown RBP23.97■■□□□ 1.43
COL6A2-208ENST00000485591 PICALMQ13492 652 aa23.96■■□□□ 1.43
COL6A2-208ENST00000485591 TGFBRAP1Q8WUH2 860 aa23.96■■□□□ 1.43
COL6A2-208ENST00000485591 SEC62Q99442 399 aaKnown RBP23.96■■□□□ 1.43
COL6A2-208ENST00000485591 TMEM39BQ9GZU3 492 aa23.96■■□□□ 1.43
COL6A2-208ENST00000485591 HELLSQ9NRZ9 838 aa23.96■■□□□ 1.43
COL6A2-208ENST00000485591 DIAPH3Q9NSV4 1193 aa23.96■■□□□ 1.43
COL6A2-208ENST00000485591 FLT1P17948 1338 aa23.95■■□□□ 1.42
COL6A2-208ENST00000485591 BAZ2AQ9UIF9 1905 aaKnown RBP23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms