RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 COL1A1P02452 1464 aaPredicted RBP6.5□□□□□ -1.37
CCDC39-205ENST00000485055 PTGDRQ13258 359 aa6.5□□□□□ -1.37
CCDC39-205ENST00000485055 DPY19L2Q6NUT2 758 aa6.5□□□□□ -1.37
CCDC39-205ENST00000485055 LDHDQ86WU2 507 aa6.5□□□□□ -1.37
CCDC39-205ENST00000485055 ENOX1Q8TC92 643 aaKnown RBP6.5□□□□□ -1.37
CCDC39-205ENST00000485055 UTYO14607 1347 aa6.5□□□□□ -1.37
CCDC39-205ENST00000485055 SPEF2Q9C093 1822 aa6.49□□□□□ -1.37
CCDC39-205ENST00000485055 ABL1P00519 1130 aa6.49□□□□□ -1.37
CCDC39-205ENST00000485055 USP17L8P0C7I0 530 aa6.49□□□□□ -1.37
CCDC39-205ENST00000485055 CD53P19397 219 aa6.49□□□□□ -1.37
CCDC39-205ENST00000485055 FANCCQ00597 558 aa6.49□□□□□ -1.37
CCDC39-205ENST00000485055 GRAPQ13588 217 aa6.49□□□□□ -1.37
CCDC39-205ENST00000485055 ERFEQ4G0M1 354 aa6.49□□□□□ -1.37
CCDC39-205ENST00000485055 DUSP27Q5VZP5 1158 aa6.49□□□□□ -1.37
CCDC39-205ENST00000485055 PNMA8AQ86V59 439 aaPredicted RBP6.49□□□□□ -1.37
CCDC39-205ENST00000485055 TRMT2AQ8IZ69 625 aaKnown RBP6.49□□□□□ -1.37
CCDC39-205ENST00000485055 ZBTB38Q8NAP3 1195 aaPredicted RBP6.49□□□□□ -1.37
CCDC39-205ENST00000485055 GRAPLQ8TC17 118 aaPredicted RBP6.49□□□□□ -1.37
CCDC39-205ENST00000485055 MS4A4AQ96JQ5 239 aa6.49□□□□□ -1.37
CCDC39-205ENST00000485055 ARPC5LQ9BPX5 153 aa6.49□□□□□ -1.37
CCDC39-205ENST00000485055 CCSER2Q9H7U1 834 aa6.49□□□□□ -1.37
CCDC39-205ENST00000485055 FRMD4BQ9Y2L6 1034 aa6.49□□□□□ -1.37
CCDC39-205ENST00000485055 SH3TC1Q8TE82 1336 aa6.49□□□□□ -1.37
CCDC39-205ENST00000485055 DNAJC6O75061 913 aa6.49□□□□□ -1.37
CCDC39-205ENST00000485055 CT47B1P0C2W7 299 aaPredicted RBP6.49□□□□□ -1.37
CCDC39-205ENST00000485055 CCDC30Q5VVM6 783 aa6.49□□□□□ -1.37
CCDC39-205ENST00000485055 ICE2Q659A1 982 aa6.49□□□□□ -1.37
CCDC39-205ENST00000485055 ANKRD13DQ6ZTN6 518 aa6.49□□□□□ -1.37
CCDC39-205ENST00000485055 USP50Q70EL3 339 aaPredicted RBP6.49□□□□□ -1.37
CCDC39-205ENST00000485055 PDILTQ8N807 584 aa6.49□□□□□ -1.37
CCDC39-205ENST00000485055 ZNF622Q969S3 477 aaKnown RBP eCLIP6.49□□□□□ -1.37
CCDC39-205ENST00000485055 METTL22Q9BUU2 404 aaPredicted RBP6.49□□□□□ -1.37
CCDC39-205ENST00000485055 H3BRB1 525 aa6.48□□□□□ -1.37
CCDC39-205ENST00000485055 RPS12P25398 132 aaKnown RBP6.48□□□□□ -1.37
CCDC39-205ENST00000485055 KIAA2012Q0VF49 1180 aa6.48□□□□□ -1.37
CCDC39-205ENST00000485055 RTL5Q5HYW3 569 aaPredicted RBP6.48□□□□□ -1.37
CCDC39-205ENST00000485055 SYNE4Q8N205 404 aa6.48□□□□□ -1.37
CCDC39-205ENST00000485055 DPF2Q92785 391 aa6.48□□□□□ -1.37
CCDC39-205ENST00000485055 NLRP3Q96P20 1036 aa6.48□□□□□ -1.37
CCDC39-205ENST00000485055 TUT1Q9H6E5 874 aaKnown RBP6.48□□□□□ -1.37
CCDC39-205ENST00000485055 CREBZFQ9NS37 354 aa6.48□□□□□ -1.37
CCDC39-205ENST00000485055 ABCC4O15439 1325 aa6.48□□□□□ -1.37
CCDC39-205ENST00000485055 SPDYE16A6NNV3 312 aaPredicted RBP6.48□□□□□ -1.37
CCDC39-205ENST00000485055 H7C1W4 665 aa6.48□□□□□ -1.37
CCDC39-205ENST00000485055 PPEF1O14829 653 aaPredicted RBP6.48□□□□□ -1.37
CCDC39-205ENST00000485055 COPB2P35606 906 aa6.48□□□□□ -1.37
CCDC39-205ENST00000485055 TERF1P54274 439 aa6.48□□□□□ -1.37
CCDC39-205ENST00000485055 CASP7P55210 303 aa6.48□□□□□ -1.37
CCDC39-205ENST00000485055 RASSF7Q02833 373 aa6.48□□□□□ -1.37
CCDC39-205ENST00000485055 PROSER3Q2NL68 480 aa6.48□□□□□ -1.37
CCDC39-205ENST00000485055 C10orf62Q5T681 223 aaPredicted RBP6.48□□□□□ -1.37
CCDC39-205ENST00000485055 CHADLQ6NUI6 762 aa6.48□□□□□ -1.37
CCDC39-205ENST00000485055 COPS6Q7L5N1 327 aa6.48□□□□□ -1.37
CCDC39-205ENST00000485055 ZNF710Q8N1W2 664 aa6.48□□□□□ -1.37
CCDC39-205ENST00000485055 XAGE3Q8WTP9 111 aa6.48□□□□□ -1.37
CCDC39-205ENST00000485055 KLRG1Q96E93 195 aa6.48□□□□□ -1.37
CCDC39-205ENST00000485055 PRM3Q9NNZ6 103 aa6.48□□□□□ -1.37
CCDC39-205ENST00000485055 IRS2Q9Y4H2 1338 aa6.48□□□□□ -1.37
CCDC39-205ENST00000485055 CLGNO14967 610 aa6.47□□□□□ -1.37
CCDC39-205ENST00000485055 CSF1RP07333 972 aa6.47□□□□□ -1.37
CCDC39-205ENST00000485055 FAM163BP0C2L3 166 aa6.47□□□□□ -1.37
CCDC39-205ENST00000485055 FKBP1AP62942 108 aaKnown RBP6.47□□□□□ -1.37
CCDC39-205ENST00000485055 JADE2Q9NQC1 790 aa6.47□□□□□ -1.37
CCDC39-205ENST00000485055 SCN9AQ15858 1988 aa6.47□□□□□ -1.37
CCDC39-205ENST00000485055 C21orf2O43822 256 aa6.47□□□□□ -1.37
CCDC39-205ENST00000485055 ITGBL1O95965 494 aaPredicted RBP6.47□□□□□ -1.37
CCDC39-205ENST00000485055 PSEN1P49768 467 aa6.47□□□□□ -1.37
CCDC39-205ENST00000485055 KSR2Q6VAB6 950 aa6.47□□□□□ -1.37
CCDC39-205ENST00000485055 TAF1DQ9H5J8 278 aaPredicted RBP6.47□□□□□ -1.37
CCDC39-205ENST00000485055 NMRK2Q9NPI5 230 aa6.47□□□□□ -1.37
CCDC39-205ENST00000485055 MIS18AQ9NYP9 233 aa6.47□□□□□ -1.37
CCDC39-205ENST00000485055 DYTNA2CJ06 578 aa6.47□□□□□ -1.37
CCDC39-205ENST00000485055 RASSF10A6NK89 507 aa6.47□□□□□ -1.37
CCDC39-205ENST00000485055 TTC36A6NLP5 189 aa6.47□□□□□ -1.37
CCDC39-205ENST00000485055 DDX58O95786 925 aaKnown RBP6.47□□□□□ -1.37
CCDC39-205ENST00000485055 CALRP27797 417 aaKnown RBP6.47□□□□□ -1.37
CCDC39-205ENST00000485055 GNALP38405 381 aa6.47□□□□□ -1.37
CCDC39-205ENST00000485055 CRTC2Q53ET0 693 aaPredicted RBP6.47□□□□□ -1.37
CCDC39-205ENST00000485055 SLC43A3Q8NBI5 491 aa6.47□□□□□ -1.37
CCDC39-205ENST00000485055 DDX12PQ92771 950 aa6.47□□□□□ -1.37
CCDC39-205ENST00000485055 CNTNAP1P78357 1384 aa6.46□□□□□ -1.37
CCDC39-205ENST00000485055 APAF1O14727 1248 aa6.46□□□□□ -1.38
CCDC39-205ENST00000485055 PDE8AO60658 829 aa6.46□□□□□ -1.38
CCDC39-205ENST00000485055 EAPPQ56P03 285 aaPredicted RBP6.46□□□□□ -1.38
CCDC39-205ENST00000485055 USP48Q86UV5 1035 aa6.46□□□□□ -1.38
CCDC39-205ENST00000485055 RPGRQ92834 1020 aaKnown RBP6.46□□□□□ -1.38
CCDC39-205ENST00000485055 THUMPD2Q9BTF0 503 aaKnown RBP6.46□□□□□ -1.38
CCDC39-205ENST00000485055 LRRC27Q9C0I9 530 aa6.46□□□□□ -1.38
CCDC39-205ENST00000485055 TGIF2Q9GZN2 237 aa6.46□□□□□ -1.38
CCDC39-205ENST00000485055 KANSL2Q9H9L4 492 aa6.46□□□□□ -1.38
CCDC39-205ENST00000485055 RRAGCQ9HB90 399 aa6.46□□□□□ -1.38
CCDC39-205ENST00000485055 PCDHGB7Q9Y5F8 929 aa6.46□□□□□ -1.38
CCDC39-205ENST00000485055 MED23Q9ULK4 1368 aa6.46□□□□□ -1.38
CCDC39-205ENST00000485055 PIK3CDO00329 1044 aa6.46□□□□□ -1.38
CCDC39-205ENST00000485055 SCP2P22307 547 aa6.46□□□□□ -1.38
CCDC39-205ENST00000485055 MTMR3Q13615 1198 aa6.46□□□□□ -1.38
CCDC39-205ENST00000485055 CASC1Q6TDU7 716 aa6.46□□□□□ -1.38
CCDC39-205ENST00000485055 TSPAN18Q96SJ8 248 aa6.46□□□□□ -1.38
CCDC39-205ENST00000485055 GMLQ99445 158 aa6.46□□□□□ -1.38
CCDC39-205ENST00000485055 EPAS1Q99814 870 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms