RNA–Protein interactions for RNA: ENST00000484767.5

SND1-211, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-211ENST00000484767 SHANK3Q9BYB0 1731 aa10.61□□□□□ -0.71
SND1-211ENST00000484767 ZNF213O14771 459 aa10.6□□□□□ -0.71
SND1-211ENST00000484767 TOM1O60784 492 aa10.6□□□□□ -0.71
SND1-211ENST00000484767 PFKFB1P16118 471 aa10.6□□□□□ -0.71
SND1-211ENST00000484767 SYKP43405 635 aa10.6□□□□□ -0.71
SND1-211ENST00000484767 TIMM10P62072 90 aa10.6□□□□□ -0.71
SND1-211ENST00000484767 TRDNQ13061 729 aa10.6□□□□□ -0.71
SND1-211ENST00000484767 TERF2Q15554 542 aa10.6□□□□□ -0.71
SND1-211ENST00000484767 RESP18Q5W5W9 173 aa10.6□□□□□ -0.71
SND1-211ENST00000484767 LMOD2Q6P5Q4 547 aa10.6□□□□□ -0.71
SND1-211ENST00000484767 WASF1Q92558 559 aa10.6□□□□□ -0.71
SND1-211ENST00000484767 MPHOSPH8Q99549 860 aa10.6□□□□□ -0.71
SND1-211ENST00000484767 MTA3Q9BTC8 594 aa10.6□□□□□ -0.71
SND1-211ENST00000484767 ISCA1Q9BUE6 129 aa10.6□□□□□ -0.71
SND1-211ENST00000484767 DACH1Q9UI36 760 aa10.6□□□□□ -0.71
SND1-211ENST00000484767 DNAI1Q9UI46 699 aa10.6□□□□□ -0.71
SND1-211ENST00000484767 ZHX1Q9UKY1 873 aaPredicted RBP10.6□□□□□ -0.71
SND1-211ENST00000484767 NDUFB9Q9Y6M9 179 aa10.6□□□□□ -0.71
SND1-211ENST00000484767 CDHR2Q9BYE9 1310 aa10.59□□□□□ -0.71
SND1-211ENST00000484767 PCDH11XQ9BZA7 1347 aa10.59□□□□□ -0.71
SND1-211ENST00000484767 PCDH11YQ9BZA8 1340 aa10.59□□□□□ -0.71
SND1-211ENST00000484767 NBPF26B4DH59 902 aa10.59□□□□□ -0.71
SND1-211ENST00000484767 ARHGAP6O43182 974 aa10.59□□□□□ -0.71
SND1-211ENST00000484767 FGAP02671 866 aa10.59□□□□□ -0.71
SND1-211ENST00000484767 PCCAP05165 728 aaPredicted RBP10.59□□□□□ -0.71
SND1-211ENST00000484767 ANTXR2P58335 489 aa10.59□□□□□ -0.71
SND1-211ENST00000484767 TUBB4BP68371 445 aa10.59□□□□□ -0.71
SND1-211ENST00000484767 GUCY1B3Q02153 619 aa10.59□□□□□ -0.71
SND1-211ENST00000484767 NKX1-1Q15270 411 aaPredicted RBP10.59□□□□□ -0.71
SND1-211ENST00000484767 ALX1Q15699 326 aa10.59□□□□□ -0.71
SND1-211ENST00000484767 ELF2Q15723 593 aa10.59□□□□□ -0.71
SND1-211ENST00000484767 CCDC57Q2TAC2 916 aa10.59□□□□□ -0.71
SND1-211ENST00000484767 GORABQ5T7V8 394 aa10.59□□□□□ -0.71
SND1-211ENST00000484767 NBPF14Q5TI25 921 aa10.59□□□□□ -0.71
SND1-211ENST00000484767 NBPF10Q6P3W6 841 aaKnown RBP10.59□□□□□ -0.71
SND1-211ENST00000484767 FBXO38Q6PIJ6 1188 aa10.59□□□□□ -0.71
SND1-211ENST00000484767 VSTM4Q8IW00 320 aa10.59□□□□□ -0.71
SND1-211ENST00000484767 NBPF15Q8N660 670 aa10.59□□□□□ -0.71
SND1-211ENST00000484767 TRIML1Q8N9V2 468 aa10.59□□□□□ -0.71
SND1-211ENST00000484767 TRMT1Q9NXH9 659 aaKnown RBP10.59□□□□□ -0.71
SND1-211ENST00000484767 ANGEL1Q9UNK9 670 aaKnown RBP10.59□□□□□ -0.71
SND1-211ENST00000484767 EFCAB8A8MWE9 144 aa10.58□□□□□ -0.72
SND1-211ENST00000484767 FOXP2O15409 715 aa10.58□□□□□ -0.72
SND1-211ENST00000484767 CHGBP05060 677 aa10.58□□□□□ -0.72
SND1-211ENST00000484767 CSF1RP07333 972 aa10.58□□□□□ -0.72
SND1-211ENST00000484767 CSB-PGBD3P0DP91 1061 aa10.58□□□□□ -0.72
SND1-211ENST00000484767 FOSBP53539 338 aa10.58□□□□□ -0.72
SND1-211ENST00000484767 RCAN1P53805 252 aa10.58□□□□□ -0.72
SND1-211ENST00000484767 UBASH3AP57075 661 aa10.58□□□□□ -0.72
SND1-211ENST00000484767 ZC3H6P61129 1189 aaKnown RBP10.58□□□□□ -0.72
SND1-211ENST00000484767 TRIM29Q14134 588 aa10.58□□□□□ -0.72
SND1-211ENST00000484767 PTPAQ15257 358 aa10.58□□□□□ -0.72
SND1-211ENST00000484767 UBE3CQ15386 1083 aa10.58□□□□□ -0.72
SND1-211ENST00000484767 WASHC4Q2M389 1173 aa10.58□□□□□ -0.72
SND1-211ENST00000484767 LRRC24Q50LG9 513 aa10.58□□□□□ -0.72
SND1-211ENST00000484767 CCDC102BQ68D86 513 aa10.58□□□□□ -0.72
SND1-211ENST00000484767 KANK3Q6NY19 840 aa10.58□□□□□ -0.72
SND1-211ENST00000484767 SGMS1Q86VZ5 419 aa10.58□□□□□ -0.72
SND1-211ENST00000484767 XAGE2Q96GT9 111 aa10.58□□□□□ -0.72
SND1-211ENST00000484767 ALG1Q9BT22 464 aa10.58□□□□□ -0.72
SND1-211ENST00000484767 TEX13AQ9BXU3 409 aaPredicted RBP10.58□□□□□ -0.72
SND1-211ENST00000484767 RGS17Q9UGC6 210 aaPredicted RBP10.58□□□□□ -0.72
SND1-211ENST00000484767 LRP5O75197 1615 aa10.58□□□□□ -0.72
SND1-211ENST00000484767 KIF28PB7ZC32 967 aa10.57□□□□□ -0.72
SND1-211ENST00000484767 SH2B2O14492 632 aaPredicted RBP10.57□□□□□ -0.72
SND1-211ENST00000484767 POLR3DP05423 398 aaPredicted RBP10.57□□□□□ -0.72
SND1-211ENST00000484767 TOP1P11387 765 aaKnown RBP10.57□□□□□ -0.72
SND1-211ENST00000484767 ADD2P35612 726 aa10.57□□□□□ -0.72
SND1-211ENST00000484767 LIFRP42702 1097 aa10.57□□□□□ -0.72
SND1-211ENST00000484767 METAP2P50579 478 aaKnown RBP eCLIP10.57□□□□□ -0.727e-7■■■■□ 21.4
SND1-211ENST00000484767 TCIRG1Q13488 830 aa10.57□□□□□ -0.72
SND1-211ENST00000484767 TUBB2AQ13885 445 aa10.57□□□□□ -0.72
SND1-211ENST00000484767 NAA30Q147X3 362 aaPredicted RBP10.57□□□□□ -0.72
SND1-211ENST00000484767 JAKMIP3Q5VZ66 844 aa10.57□□□□□ -0.72
SND1-211ENST00000484767 KRT40Q6A162 431 aa10.57□□□□□ -0.72
SND1-211ENST00000484767 TTLL5Q6EMB2 1281 aa10.57□□□□□ -0.72
SND1-211ENST00000484767 SYT10Q6XYQ8 523 aa10.57□□□□□ -0.72
SND1-211ENST00000484767 KRBA2Q6ZNG9 492 aa10.57□□□□□ -0.72
SND1-211ENST00000484767 PROSER2Q86WR7 435 aaPredicted RBP10.57□□□□□ -0.72
SND1-211ENST00000484767 HOMER1Q86YM7 354 aa10.57□□□□□ -0.72
SND1-211ENST00000484767 UBXN4Q92575 508 aa10.57□□□□□ -0.72
SND1-211ENST00000484767 CCDC34Q96HJ3 373 aa10.57□□□□□ -0.72
SND1-211ENST00000484767 TUBB2BQ9BVA1 445 aa10.57□□□□□ -0.72
SND1-211ENST00000484767 BCORQ6W2J9 1755 aa10.57□□□□□ -0.72
SND1-211ENST00000484767 MROH7-TTC4A0A0A0MT08 1334 aa10.57□□□□□ -0.72
SND1-211ENST00000484767 MYH6P13533 1939 aa10.56□□□□□ -0.72
SND1-211ENST00000484767 GPAA1O43292 621 aa10.56□□□□□ -0.72
SND1-211ENST00000484767 STX10O60499 249 aa10.56□□□□□ -0.72
SND1-211ENST00000484767 WDHD1O75717 1129 aaPredicted RBP10.56□□□□□ -0.72
SND1-211ENST00000484767 SERPINC1P01008 464 aa10.56□□□□□ -0.72
SND1-211ENST00000484767 UQCRFS1P1P0C7P4 283 aa10.56□□□□□ -0.72
SND1-211ENST00000484767 TBX2Q13207 712 aaPredicted RBP10.56□□□□□ -0.72
SND1-211ENST00000484767 GNL2Q13823 731 aaKnown RBP10.56□□□□□ -0.72
SND1-211ENST00000484767 TEX35Q5T0J7 233 aa10.56□□□□□ -0.72
SND1-211ENST00000484767 NT5DC1Q5TFE4 455 aa10.56□□□□□ -0.72
SND1-211ENST00000484767 TRIM65Q6PJ69 517 aa10.56□□□□□ -0.72
SND1-211ENST00000484767 TTLL7Q6ZT98 887 aa10.56□□□□□ -0.72
SND1-211ENST00000484767 VPS37DQ86XT2 251 aa10.56□□□□□ -0.72
SND1-211ENST00000484767 REXO1L1PQ8IX06 675 aa10.56□□□□□ -0.72
SND1-211ENST00000484767 ZNF579Q8NAF0 562 aaKnown RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms