RNA–Protein interactions for RNA: ENST00000484520.1

SPTA1-206, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-206ENST00000484520 POLIQ9UNA4 740 aa6.57□□□□□ -1.36
SPTA1-206ENST00000484520 ARAP1Q96P48 1450 aa6.57□□□□□ -1.36
SPTA1-206ENST00000484520 CARMIL2Q6F5E8 1435 aa6.57□□□□□ -1.36
SPTA1-206ENST00000484520 FYCO1Q9BQS8 1478 aa6.56□□□□□ -1.36
SPTA1-206ENST00000484520 TNFRSF21O75509 655 aa6.56□□□□□ -1.36
SPTA1-206ENST00000484520 JUNBP17275 347 aaPredicted RBP6.56□□□□□ -1.36
SPTA1-206ENST00000484520 POU5F2Q8N7G0 328 aa6.56□□□□□ -1.36
SPTA1-206ENST00000484520 PAK6Q9NQU5 681 aaPredicted RBP6.56□□□□□ -1.36
SPTA1-206ENST00000484520 LATS2Q9NRM7 1088 aa6.56□□□□□ -1.36
SPTA1-206ENST00000484520 FOXD3Q9UJU5 478 aaPredicted RBP6.56□□□□□ -1.36
SPTA1-206ENST00000484520 SAMD9Q5K651 1589 aa6.56□□□□□ -1.36
SPTA1-206ENST00000484520 METTL12A8MUP2 240 aa6.55□□□□□ -1.36
SPTA1-206ENST00000484520 ADH5P11766 374 aa6.55□□□□□ -1.36
SPTA1-206ENST00000484520 PEAR1Q5VY43 1037 aaPredicted RBP6.55□□□□□ -1.36
SPTA1-206ENST00000484520 AGBL5Q8NDL9 886 aa6.55□□□□□ -1.36
SPTA1-206ENST00000484520 LRRC4CQ9HCJ2 640 aa6.55□□□□□ -1.36
SPTA1-206ENST00000484520 ZC3H7BQ9UGR2 993 aaKnown RBP6.55□□□□□ -1.36
SPTA1-206ENST00000484520 ACTL7BQ9Y614 415 aa6.55□□□□□ -1.36
SPTA1-206ENST00000484520 CASKIN1Q8WXD9 1431 aa6.55□□□□□ -1.36
SPTA1-206ENST00000484520 NFICP08651 508 aa6.54□□□□□ -1.36
SPTA1-206ENST00000484520 RAB6AP20340 208 aa6.54□□□□□ -1.36
SPTA1-206ENST00000484520 DUSP27Q5VZP5 1158 aa6.54□□□□□ -1.36
SPTA1-206ENST00000484520 SNX29Q8TEQ0 813 aa6.54□□□□□ -1.36
SPTA1-206ENST00000484520 GTF3C2Q8WUA4 911 aaPredicted RBP6.54□□□□□ -1.36
SPTA1-206ENST00000484520 PBXIP1Q96AQ6 731 aa6.54□□□□□ -1.36
SPTA1-206ENST00000484520 NRSN2Q9GZP1 204 aa6.54□□□□□ -1.36
SPTA1-206ENST00000484520 CTSBP07858 339 aa6.53□□□□□ -1.36
SPTA1-206ENST00000484520 TRIM26Q12899 539 aaPredicted RBP6.53□□□□□ -1.36
SPTA1-206ENST00000484520 MTMR3Q13615 1198 aa6.53□□□□□ -1.36
SPTA1-206ENST00000484520 AAMPQ13685 434 aa6.53□□□□□ -1.36
SPTA1-206ENST00000484520 ALKBH2Q6NS38 261 aa6.53□□□□□ -1.36
SPTA1-206ENST00000484520 ZNF765Q7L2R6 523 aa6.53□□□□□ -1.36
SPTA1-206ENST00000484520 AMOTL2Q9Y2J4 779 aa6.53□□□□□ -1.36
SPTA1-206ENST00000484520 CCDC18Q5T9S5 1454 aa6.53□□□□□ -1.36
SPTA1-206ENST00000484520 MAOBP27338 520 aa6.52□□□□□ -1.37
SPTA1-206ENST00000484520 MAP7Q14244 749 aa6.52□□□□□ -1.37
SPTA1-206ENST00000484520 DYMQ7RTS9 669 aa6.52□□□□□ -1.37
SPTA1-206ENST00000484520 KRTAP4-9Q9BYQ8 210 aa6.52□□□□□ -1.37
SPTA1-206ENST00000484520 SEMA6CQ9H3T2 930 aa6.52□□□□□ -1.37
SPTA1-206ENST00000484520 CEP170Q5SW79 1584 aa6.52□□□□□ -1.37
SPTA1-206ENST00000484520 FHOD3Q2V2M9 1422 aa6.51□□□□□ -1.37
SPTA1-206ENST00000484520 EIF4EBP3O60516 100 aaPredicted RBP6.51□□□□□ -1.37
SPTA1-206ENST00000484520 CYP27A1Q02318 531 aa6.51□□□□□ -1.37
SPTA1-206ENST00000484520 PCDH1Q08174 1060 aa6.51□□□□□ -1.37
SPTA1-206ENST00000484520 ZNF423Q2M1K9 1284 aa6.51□□□□□ -1.37
SPTA1-206ENST00000484520 AKAP4Q5JQC9 854 aa6.51□□□□□ -1.37
SPTA1-206ENST00000484520 KRTAP4-2Q9BYR5 136 aa6.51□□□□□ -1.37
SPTA1-206ENST00000484520 KIAA0556O60303 1618 aa6.5□□□□□ -1.37
SPTA1-206ENST00000484520 A0A096LPE4 126 aa6.5□□□□□ -1.37
SPTA1-206ENST00000484520 A0A1W2PPZ6 126 aa6.5□□□□□ -1.37
SPTA1-206ENST00000484520 PAPLNO95428 1278 aa6.5□□□□□ -1.37
SPTA1-206ENST00000484520 POLR3DP05423 398 aaPredicted RBP6.5□□□□□ -1.37
SPTA1-206ENST00000484520 RANGAP1P46060 587 aaPredicted RBP6.5□□□□□ -1.37
SPTA1-206ENST00000484520 EHHADHQ08426 723 aa6.5□□□□□ -1.37
SPTA1-206ENST00000484520 POU4F3Q15319 338 aa6.5□□□□□ -1.37
SPTA1-206ENST00000484520 CLEC4MQ9H2X3 399 aaPredicted RBP6.5□□□□□ -1.37
SPTA1-206ENST00000484520 ACSS3Q9H6R3 686 aa6.5□□□□□ -1.37
SPTA1-206ENST00000484520 ZFYVE28Q9HCC9 887 aa6.5□□□□□ -1.37
SPTA1-206ENST00000484520 RAD18Q9NS91 495 aa6.5□□□□□ -1.37
SPTA1-206ENST00000484520 FAM105AQ9NUU6 356 aa6.5□□□□□ -1.37
SPTA1-206ENST00000484520 DISP1Q96F81 1524 aa6.5□□□□□ -1.37
SPTA1-206ENST00000484520 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.49□□□□□ -1.37
SPTA1-206ENST00000484520 CYP11A1P05108 521 aa6.49□□□□□ -1.37
SPTA1-206ENST00000484520 USP5P45974 858 aa6.49□□□□□ -1.37
SPTA1-206ENST00000484520 SPRED3Q2MJR0 410 aa6.49□□□□□ -1.37
SPTA1-206ENST00000484520 ZNF574Q6ZN55 896 aaPredicted RBP6.49□□□□□ -1.37
SPTA1-206ENST00000484520 BCL7CQ8WUZ0 217 aaPredicted RBP6.49□□□□□ -1.37
SPTA1-206ENST00000484520 AP4E1Q9UPM8 1137 aa6.49□□□□□ -1.37
SPTA1-206ENST00000484520 CDK11AQ9UQ88 783 aaPredicted RBP6.49□□□□□ -1.37
SPTA1-206ENST00000484520 SLC5A6Q9Y289 635 aa6.49□□□□□ -1.37
SPTA1-206ENST00000484520 HECW1Q76N89 1606 aa6.48□□□□□ -1.37
SPTA1-206ENST00000484520 DYNC1LI2O43237 492 aaPredicted RBP6.48□□□□□ -1.37
SPTA1-206ENST00000484520 ECEL1O95672 775 aa6.48□□□□□ -1.37
SPTA1-206ENST00000484520 NPR3P17342 541 aa6.48□□□□□ -1.37
SPTA1-206ENST00000484520 ASPAP45381 313 aa6.48□□□□□ -1.37
SPTA1-206ENST00000484520 GRIA4P48058 902 aa6.48□□□□□ -1.37
SPTA1-206ENST00000484520 PLCL1Q15111 1095 aa6.48□□□□□ -1.37
SPTA1-206ENST00000484520 ZNF648Q5T619 568 aaPredicted RBP6.48□□□□□ -1.37
SPTA1-206ENST00000484520 SEZ6L2Q6UXD5 910 aa6.48□□□□□ -1.37
SPTA1-206ENST00000484520 CCNJLQ8IV13 435 aa6.48□□□□□ -1.37
SPTA1-206ENST00000484520 LGR6Q9HBX8 967 aa6.48□□□□□ -1.37
SPTA1-206ENST00000484520 C1GALT1Q9NS00 363 aa6.48□□□□□ -1.37
SPTA1-206ENST00000484520 CLASP1Q7Z460 1538 aa6.48□□□□□ -1.37
SPTA1-206ENST00000484520 TIAM1Q13009 1591 aa6.48□□□□□ -1.37
SPTA1-206ENST00000484520 SHROOM2Q13796 1616 aa6.47□□□□□ -1.37
SPTA1-206ENST00000484520 A0A1W2PP55 124 aa6.47□□□□□ -1.37
SPTA1-206ENST00000484520 FZD6O60353 706 aa6.47□□□□□ -1.37
SPTA1-206ENST00000484520 FAM13AO94988 1023 aa6.47□□□□□ -1.37
SPTA1-206ENST00000484520 ZNF792Q3KQV3 632 aa6.47□□□□□ -1.37
SPTA1-206ENST00000484520 HP1BP3Q5SSJ5 553 aaPredicted RBP6.47□□□□□ -1.37
SPTA1-206ENST00000484520 SPRED2Q7Z698 418 aa6.47□□□□□ -1.37
SPTA1-206ENST00000484520 WFDC3Q8IUB2 231 aa6.47□□□□□ -1.37
SPTA1-206ENST00000484520 TCF12Q99081 682 aa6.47□□□□□ -1.37
SPTA1-206ENST00000484520 LIN7BQ9HAP6 207 aa6.47□□□□□ -1.37
SPTA1-206ENST00000484520 DAGLAQ9Y4D2 1042 aa6.47□□□□□ -1.37
SPTA1-206ENST00000484520 PRG4Q92954 1404 aaPredicted RBP6.47□□□□□ -1.37
SPTA1-206ENST00000484520 PCF11O94913 1555 aaKnown RBP6.47□□□□□ -1.37
SPTA1-206ENST00000484520 LRRC9Q6ZRR7 1453 aa6.47□□□□□ -1.37
SPTA1-206ENST00000484520 BNIP3Q12983 259 aa6.46□□□□□ -1.38
SPTA1-206ENST00000484520 OGFOD3Q6PK18 319 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms