RNA–Protein interactions for RNA: ENST00000484441.1

CCDC66-219, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 302 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-219ENST00000484441 ARNTP27540 789 aa8.94□□□□□ -0.98
CCDC66-219ENST00000484441 MAP4P27816 1152 aaKnown RBP8.94□□□□□ -0.98
CCDC66-219ENST00000484441 ZMYM1Q5SVZ6 1142 aa8.94□□□□□ -0.98
CCDC66-219ENST00000484441 RNF43Q68DV7 783 aa8.94□□□□□ -0.98
CCDC66-219ENST00000484441 ACTL7BQ9Y614 415 aa8.94□□□□□ -0.98
CCDC66-219ENST00000484441 EIF4BP23588 611 aaKnown RBP8.93□□□□□ -0.98
CCDC66-219ENST00000484441 NFIAQ12857 509 aa8.93□□□□□ -0.98
CCDC66-219ENST00000484441 PDE3AQ14432 1141 aa8.93□□□□□ -0.98
CCDC66-219ENST00000484441 TPTE2Q6XPS3 522 aa8.93□□□□□ -0.98
CCDC66-219ENST00000484441 RNF112Q9ULX5 631 aa8.93□□□□□ -0.98
CCDC66-219ENST00000484441 TMPRSS2O15393 492 aa8.92□□□□□ -0.98
CCDC66-219ENST00000484441 BMP6P22004 513 aa8.92□□□□□ -0.98
CCDC66-219ENST00000484441 DAB2P98082 770 aa8.92□□□□□ -0.98
CCDC66-219ENST00000484441 AKAP4Q5JQC9 854 aa8.92□□□□□ -0.98
CCDC66-219ENST00000484441 CDPF1Q6NVV7 123 aa8.92□□□□□ -0.98
CCDC66-219ENST00000484441 WDR89Q96FK6 387 aaPredicted RBP8.92□□□□□ -0.98
CCDC66-219ENST00000484441 DBNDD2Q9BQY9 259 aa8.92□□□□□ -0.98
CCDC66-219ENST00000484441 EMILIN2Q9BXX0 1053 aa8.92□□□□□ -0.98
CCDC66-219ENST00000484441 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.91□□□□□ -0.98
CCDC66-219ENST00000484441 FBXO24O75426 580 aa8.91□□□□□ -0.98
CCDC66-219ENST00000484441 PAGE1O75459 146 aa8.91□□□□□ -0.98
CCDC66-219ENST00000484441 LIG1P18858 919 aa8.91□□□□□ -0.98
CCDC66-219ENST00000484441 KCNF1Q9H3M0 494 aa8.91□□□□□ -0.98
CCDC66-219ENST00000484441 ACSS3Q9H6R3 686 aa8.91□□□□□ -0.98
CCDC66-219ENST00000484441 RAD18Q9NS91 495 aa8.91□□□□□ -0.98
CCDC66-219ENST00000484441 FAM105AQ9NUU6 356 aa8.91□□□□□ -0.98
CCDC66-219ENST00000484441 CRIM1Q9NZV1 1036 aa8.91□□□□□ -0.98
CCDC66-219ENST00000484441 PARP2Q9UGN5 583 aa8.91□□□□□ -0.98
CCDC66-219ENST00000484441 PPP1R9AQ9ULJ8 1098 aa8.91□□□□□ -0.98
CCDC66-219ENST00000484441 CELA3AP09093 270 aa8.9□□□□□ -0.98
CCDC66-219ENST00000484441 HNRNPUQ00839 825 aaKnown RBP eCLIP8.9□□□□□ -0.98
CCDC66-219ENST00000484441 SCARA3Q6AZY7 606 aa8.9□□□□□ -0.98
CCDC66-219ENST00000484441 SV2BQ7L1I2 683 aa8.9□□□□□ -0.98
CCDC66-219ENST00000484441 TMC4Q7Z404 712 aa8.9□□□□□ -0.98
CCDC66-219ENST00000484441 ZDHHC13Q8IUH4 622 aa8.9□□□□□ -0.98
CCDC66-219ENST00000484441 FBLIM1Q8WUP2 373 aa8.9□□□□□ -0.98
CCDC66-219ENST00000484441 ZC3H12CQ9C0D7 883 aaKnown RBP8.9□□□□□ -0.98
CCDC66-219ENST00000484441 AP4E1Q9UPM8 1137 aa8.9□□□□□ -0.98
CCDC66-219ENST00000484441 YIPF2Q9BWQ6 316 aa8.89□□□□□ -0.99
CCDC66-219ENST00000484441 SAMM50Q9Y512 469 aa8.89□□□□□ -0.99
CCDC66-219ENST00000484441 FAM95CA0A1B0GW59 222 aa8.88□□□□□ -0.99
CCDC66-219ENST00000484441 USP11P51784 963 aa8.88□□□□□ -0.99
CCDC66-219ENST00000484441 ID3Q02535 119 aa8.88□□□□□ -0.99
CCDC66-219ENST00000484441 RASIP1Q5U651 963 aa8.88□□□□□ -0.99
CCDC66-219ENST00000484441 KCNB2Q92953 911 aa8.88□□□□□ -0.99
CCDC66-219ENST00000484441 SEMA6CQ9H3T2 930 aa8.88□□□□□ -0.99
CCDC66-219ENST00000484441 ZBTB7CA1YPR0 619 aa8.87□□□□□ -0.99
CCDC66-219ENST00000484441 TRIM37O94972 964 aa8.87□□□□□ -0.99
CCDC66-219ENST00000484441 SLFN14P0C7P3 912 aa8.87□□□□□ -0.99
CCDC66-219ENST00000484441 TAGLNQ01995 201 aaKnown RBP8.87□□□□□ -0.99
CCDC66-219ENST00000484441 MAP1SQ66K74 1059 aaPredicted RBP8.87□□□□□ -0.99
CCDC66-219ENST00000484441 SEZ6L2Q6UXD5 910 aa8.87□□□□□ -0.99
CCDC66-219ENST00000484441 DYMQ7RTS9 669 aa8.87□□□□□ -0.99
CCDC66-219ENST00000484441 Q8N3U1 123 aa8.87□□□□□ -0.99
CCDC66-219ENST00000484441 GPBAR1Q8TDU6 330 aa8.87□□□□□ -0.99
CCDC66-219ENST00000484441 GATA6Q92908 595 aa8.87□□□□□ -0.99
CCDC66-219ENST00000484441 FANCD2OSQ96PS1 177 aa8.87□□□□□ -0.99
CCDC66-219ENST00000484441 TTF2Q9UNY4 1162 aaKnown RBP8.87□□□□□ -0.99
CCDC66-219ENST00000484441 CTSHP09668 335 aa8.86□□□□□ -0.99
CCDC66-219ENST00000484441 RXRBP28702 533 aa8.86□□□□□ -0.99
CCDC66-219ENST00000484441 ASPAP45381 313 aa8.86□□□□□ -0.99
CCDC66-219ENST00000484441 PSMD2Q13200 908 aa8.86□□□□□ -0.99
CCDC66-219ENST00000484441 LRP8Q14114 963 aa8.86□□□□□ -0.99
CCDC66-219ENST00000484441 ZC3H12AQ5D1E8 599 aaKnown RBP8.86□□□□□ -0.99
CCDC66-219ENST00000484441 PCNX4Q63HM2 1172 aa8.86□□□□□ -0.99
CCDC66-219ENST00000484441 PAOXQ6QHF9 649 aa8.86□□□□□ -0.99
CCDC66-219ENST00000484441 GRIN3AQ8TCU5 1115 aa8.86□□□□□ -0.99
CCDC66-219ENST00000484441 ATXN3LQ9H3M9 355 aa8.86□□□□□ -0.99
CCDC66-219ENST00000484441 DISC1Q9NRI5 854 aa8.86□□□□□ -0.99
CCDC66-219ENST00000484441 CYP8B1Q9UNU6 501 aa8.86□□□□□ -0.99
CCDC66-219ENST00000484441 PRR19A6NJB7 356 aa8.85□□□□□ -0.99
CCDC66-219ENST00000484441 ERVK-24P63145 666 aa8.85□□□□□ -0.99
CCDC66-219ENST00000484441 MAP7Q14244 749 aa8.85□□□□□ -0.99
CCDC66-219ENST00000484441 LRRC14Q15048 493 aa8.85□□□□□ -0.99
CCDC66-219ENST00000484441 ARTNQ5T4W7 220 aa8.85□□□□□ -0.99
CCDC66-219ENST00000484441 LLGL2Q6P1M3 1020 aa8.85□□□□□ -0.99
CCDC66-219ENST00000484441 MPRIPQ6WCQ1 1025 aa8.85□□□□□ -0.99
CCDC66-219ENST00000484441 SHKBP1Q8TBC3 707 aa8.85□□□□□ -0.99
CCDC66-219ENST00000484441 PRKAG2Q9UGJ0 569 aa8.85□□□□□ -0.99
CCDC66-219ENST00000484441 NFICP08651 508 aa8.84□□□□□ -0.99
CCDC66-219ENST00000484441 RAB6AP20340 208 aa8.84□□□□□ -0.99
CCDC66-219ENST00000484441 ST13P50502 369 aaKnown RBP8.84□□□□□ -0.99
CCDC66-219ENST00000484441 XPCQ01831 940 aaPredicted RBP8.84□□□□□ -0.99
CCDC66-219ENST00000484441 CPSF6Q16630 551 aaKnown RBP eCLIP8.84□□□□□ -0.99
CCDC66-219ENST00000484441 TMCO4Q5TGY1 634 aa8.84□□□□□ -0.99
CCDC66-219ENST00000484441 MEI1Q5TIA1 1274 aa8.84□□□□□ -0.99
CCDC66-219ENST00000484441 CBX8Q9HC52 389 aa8.84□□□□□ -0.99
CCDC66-219ENST00000484441 TGFB1P01137 390 aa8.83□□□□□ -1
CCDC66-219ENST00000484441 F13BP05160 661 aa8.83□□□□□ -1
CCDC66-219ENST00000484441 CD97P48960 835 aa8.83□□□□□ -1
CCDC66-219ENST00000484441 RPS26P62854 115 aaKnown RBP8.83□□□□□ -1
CCDC66-219ENST00000484441 NFKBIBQ15653 356 aa8.83□□□□□ -1
CCDC66-219ENST00000484441 ZAR1Q86SH2 424 aa8.83□□□□□ -1
CCDC66-219ENST00000484441 GAL3ST3Q96A11 431 aa8.83□□□□□ -1
CCDC66-219ENST00000484441 CRELD1Q96HD1 420 aa8.83□□□□□ -1
CCDC66-219ENST00000484441 MFSD14AQ96MC6 490 aa8.83□□□□□ -1
CCDC66-219ENST00000484441 FAM161BQ96MY7 647 aa8.83□□□□□ -1
CCDC66-219ENST00000484441 C1GALT1Q9NS00 363 aa8.83□□□□□ -1
CCDC66-219ENST00000484441 KIAA1324LA8MWY0 1029 aaPredicted RBP8.82□□□□□ -1
CCDC66-219ENST00000484441 RING1Q06587 406 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms