RNA–Protein interactions for RNA: ENST00000483871.6

SRSF6-202, Transcript of serine and arginine rich splicing factor 6, humanhuman

TSL 2

Gene SRSF6, Length 1,680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-202ENST00000483871 ARMT1Q9H993 441 aa17.01■□□□□ 0.31
SRSF6-202ENST00000483871 HACL1Q9UJ83 578 aa17.01■□□□□ 0.31
SRSF6-202ENST00000483871 RFX7Q2KHR2 1363 aa17.01■□□□□ 0.31
SRSF6-202ENST00000483871 ASTN2O75129 1339 aaPredicted RBP17.01■□□□□ 0.31
SRSF6-202ENST00000483871 MAGEB6P1A0A0J9YX57 407 aa17.01■□□□□ 0.31
SRSF6-202ENST00000483871 HIP1O00291 1037 aa17.01■□□□□ 0.31
SRSF6-202ENST00000483871 MBD4O95243 580 aa17.01■□□□□ 0.31
SRSF6-202ENST00000483871 KIF4BQ2VIQ3 1234 aa17.01■□□□□ 0.31
SRSF6-202ENST00000483871 MCMDC2Q4G0Z9 681 aa17.01■□□□□ 0.31
SRSF6-202ENST00000483871 ZBED3Q96IU2 234 aaPredicted RBP17.01■□□□□ 0.31
SRSF6-202ENST00000483871 HELLSQ9NRZ9 838 aa17.01■□□□□ 0.31
SRSF6-202ENST00000483871 MAST2Q6P0Q8 1798 aa17■□□□□ 0.31
SRSF6-202ENST00000483871 EPHX2P34913 555 aa17■□□□□ 0.31
SRSF6-202ENST00000483871 RHBDL3P58872 404 aa17■□□□□ 0.31
SRSF6-202ENST00000483871 PPP4CP60510 307 aa17■□□□□ 0.31
SRSF6-202ENST00000483871 CDC42EP5Q6NZY7 148 aa17■□□□□ 0.31
SRSF6-202ENST00000483871 TICAM2Q86XR7 235 aa17■□□□□ 0.31
SRSF6-202ENST00000483871 MTMR14Q8NCE2 650 aa17■□□□□ 0.31
SRSF6-202ENST00000483871 SH3RF3Q8TEJ3 882 aaPredicted RBP17■□□□□ 0.31
SRSF6-202ENST00000483871 AIDAQ96BJ3 306 aa17■□□□□ 0.31
SRSF6-202ENST00000483871 NMRK2Q9NPI5 230 aa17■□□□□ 0.31
SRSF6-202ENST00000483871 ADARB2Q9NS39 739 aaKnown RBP17■□□□□ 0.31
SRSF6-202ENST00000483871 CLRN2A0PK11 232 aa16.99■□□□□ 0.31
SRSF6-202ENST00000483871 GPAA1O43292 621 aa16.99■□□□□ 0.31
SRSF6-202ENST00000483871 PRKAB2O43741 272 aa16.99■□□□□ 0.31
SRSF6-202ENST00000483871 BAG3O95817 575 aa16.99■□□□□ 0.31
SRSF6-202ENST00000483871 MMP14P50281 582 aa16.99■□□□□ 0.31
SRSF6-202ENST00000483871 CACNB3P54284 484 aa16.99■□□□□ 0.31
SRSF6-202ENST00000483871 TAF1DQ9H5J8 278 aaPredicted RBP16.99■□□□□ 0.31
SRSF6-202ENST00000483871 USP40Q9NVE5 1235 aa16.99■□□□□ 0.31
SRSF6-202ENST00000483871 SCAF8Q9UPN6 1271 aaKnown RBP16.99■□□□□ 0.31
SRSF6-202ENST00000483871 TMED8Q6PL24 325 aaPredicted RBP16.98■□□□□ 0.31
SRSF6-202ENST00000483871 STRBPQ96SI9 672 aaKnown RBP16.98■□□□□ 0.31
SRSF6-202ENST00000483871 NOL10Q9BSC4 688 aaKnown RBP16.98■□□□□ 0.31
SRSF6-202ENST00000483871 WDR90Q96KV7 1748 aa16.98■□□□□ 0.31
SRSF6-202ENST00000483871 IQCA1LA6NCM1 817 aa16.97■□□□□ 0.31
SRSF6-202ENST00000483871 VPS53Q5VIR6 699 aa16.97■□□□□ 0.31
SRSF6-202ENST00000483871 SDR42E1Q8WUS8 393 aa16.97■□□□□ 0.31
SRSF6-202ENST00000483871 ESYT1Q9BSJ8 1104 aa16.97■□□□□ 0.31
SRSF6-202ENST00000483871 SGSM2O43147 1006 aa16.97■□□□□ 0.31
SRSF6-202ENST00000483871 VEGFAP15692 232 aaPredicted RBP16.97■□□□□ 0.31
SRSF6-202ENST00000483871 C8orf34Q49A92 452 aa16.97■□□□□ 0.31
SRSF6-202ENST00000483871 EAPPQ56P03 285 aaPredicted RBP16.97■□□□□ 0.31
SRSF6-202ENST00000483871 TGFBRAP1Q8WUH2 860 aa16.97■□□□□ 0.31
SRSF6-202ENST00000483871 RUFY2Q8WXA3 655 aa16.97■□□□□ 0.31
SRSF6-202ENST00000483871 ZNF70Q9UC06 446 aaPredicted RBP16.97■□□□□ 0.31
SRSF6-202ENST00000483871 SCN4AP35499 1836 aa16.96■□□□□ 0.31
SRSF6-202ENST00000483871 WDHD1O75717 1129 aaPredicted RBP16.96■□□□□ 0.31
SRSF6-202ENST00000483871 POTEIP0CG38 1075 aa16.96■□□□□ 0.31
SRSF6-202ENST00000483871 POTEJP0CG39 1038 aa16.96■□□□□ 0.31
SRSF6-202ENST00000483871 NFIAQ12857 509 aa16.96■□□□□ 0.31
SRSF6-202ENST00000483871 CASC1Q6TDU7 716 aa16.96■□□□□ 0.31
SRSF6-202ENST00000483871 TEX11Q8IYF3 940 aa16.96■□□□□ 0.31
SRSF6-202ENST00000483871 CCDC171Q6TFL3 1326 aa16.96■□□□□ 0.31
SRSF6-202ENST00000483871 FOXP2O15409 715 aa16.95■□□□□ 0.3
SRSF6-202ENST00000483871 PICALMQ13492 652 aa16.95■□□□□ 0.3
SRSF6-202ENST00000483871 SPDYE2Q495Y8 402 aa16.95■□□□□ 0.3
SRSF6-202ENST00000483871 USP50Q70EL3 339 aaPredicted RBP16.95■□□□□ 0.3
SRSF6-202ENST00000483871 VEZTQ9HBM0 779 aa16.95■□□□□ 0.3
SRSF6-202ENST00000483871 DDX4Q9NQI0 724 aaKnown RBP16.95■□□□□ 0.3
SRSF6-202ENST00000483871 SLC4A4Q9Y6R1 1079 aa16.95■□□□□ 0.3
SRSF6-202ENST00000483871 TCP10L2B9ZVM9 353 aa16.94■□□□□ 0.3
SRSF6-202ENST00000483871 MYO1BO43795 1136 aa16.94■□□□□ 0.3
SRSF6-202ENST00000483871 ANGEL2Q5VTE6 544 aaKnown RBP16.94■□□□□ 0.3
SRSF6-202ENST00000483871 MAPKAPK5Q8IW41 473 aa16.94■□□□□ 0.3
SRSF6-202ENST00000483871 POLR2AP24928 1970 aaKnown RBP16.94■□□□□ 0.3
SRSF6-202ENST00000483871 GSG1L2A8MUP6 293 aa16.94■□□□□ 0.3
SRSF6-202ENST00000483871 SEC24BO95487 1268 aa16.94■□□□□ 0.3
SRSF6-202ENST00000483871 HSPD1P10809 573 aaKnown RBP16.94■□□□□ 0.3
SRSF6-202ENST00000483871 PLCG2P16885 1265 aa16.94■□□□□ 0.3
SRSF6-202ENST00000483871 YY1P25490 414 aa16.94■□□□□ 0.3
SRSF6-202ENST00000483871 PTH1RQ03431 593 aa16.94■□□□□ 0.3
SRSF6-202ENST00000483871 TCP10Q12799 353 aa16.94■□□□□ 0.3
SRSF6-202ENST00000483871 ZFPM1Q8IX07 1006 aa16.94■□□□□ 0.3
SRSF6-202ENST00000483871 CRNKL1Q9BZJ0 848 aaKnown RBP16.94■□□□□ 0.3
SRSF6-202ENST00000483871 GGA3Q9NZ52 723 aa16.94■□□□□ 0.3
SRSF6-202ENST00000483871 FAM198AQ9UFP1 575 aa16.94■□□□□ 0.3
SRSF6-202ENST00000483871 PATL2C9JE40 543 aaKnown RBP16.93■□□□□ 0.3
SRSF6-202ENST00000483871 APPP05067 770 aa16.93■□□□□ 0.3
SRSF6-202ENST00000483871 USP5P45974 858 aa16.93■□□□□ 0.3
SRSF6-202ENST00000483871 GPBP1L1Q9HC44 474 aaPredicted RBP16.93■□□□□ 0.3
SRSF6-202ENST00000483871 EPB41L4AQ9HCS5 686 aaPredicted RBP16.93■□□□□ 0.3
SRSF6-202ENST00000483871 RAD50Q92878 1312 aa16.93■□□□□ 0.3
SRSF6-202ENST00000483871 SLC4A8Q2Y0W8 1093 aa16.92■□□□□ 0.3
SRSF6-202ENST00000483871 PNMA8AQ86V59 439 aaPredicted RBP16.92■□□□□ 0.3
SRSF6-202ENST00000483871 IDI2Q9BXS1 227 aa16.92■□□□□ 0.3
SRSF6-202ENST00000483871 DCP1AQ9NPI6 582 aaPredicted RBP16.92■□□□□ 0.3
SRSF6-202ENST00000483871 MKRN1Q9UHC7 482 aaKnown RBP16.92■□□□□ 0.3
SRSF6-202ENST00000483871 ECM29Q5VYK3 1845 aa16.92■□□□□ 0.3
SRSF6-202ENST00000483871 CDK5RAP2Q96SN8 1893 aa16.92■□□□□ 0.3
SRSF6-202ENST00000483871 GNAT2P19087 354 aa16.91■□□□□ 0.3
SRSF6-202ENST00000483871 MFAP1P55081 439 aaKnown RBP16.91■□□□□ 0.3
SRSF6-202ENST00000483871 DLK2Q6UY11 383 aa16.91■□□□□ 0.3
SRSF6-202ENST00000483871 CERS3Q8IU89 383 aa16.91■□□□□ 0.3
SRSF6-202ENST00000483871 IFNL3Q8IZI9 196 aa16.91■□□□□ 0.3
SRSF6-202ENST00000483871 ANO2Q9NQ90 1003 aa16.91■□□□□ 0.3
SRSF6-202ENST00000483871 TMOD2Q9NZR1 351 aa16.91■□□□□ 0.3
SRSF6-202ENST00000483871 CLEC11AQ9Y240 323 aa16.91■□□□□ 0.3
SRSF6-202ENST00000483871 FLT1P17948 1338 aa16.91■□□□□ 0.3
SRSF6-202ENST00000483871 EVX2Q03828 476 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms