RNA–Protein interactions for RNA: ENST00000482056.2

C9orf3-218, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 1,951 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-218ENST00000482056 KIF2AO00139 706 aaPredicted RBP17.78■□□□□ 0.44
C9orf3-218ENST00000482056 CYP19A1P11511 503 aaPredicted RBP17.78■□□□□ 0.44
C9orf3-218ENST00000482056 SLC5A1P13866 664 aa17.78■□□□□ 0.44
C9orf3-218ENST00000482056 NUP98P52948 1817 aa17.78■□□□□ 0.44
C9orf3-218ENST00000482056 PTPN14Q15678 1187 aa17.78■□□□□ 0.44
C9orf3-218ENST00000482056 DPCR1Q3MIW9 517 aa17.78■□□□□ 0.44
C9orf3-218ENST00000482056 AXDND1Q5T1B0 1012 aaPredicted RBP17.78■□□□□ 0.44
C9orf3-218ENST00000482056 KRT40Q6A162 431 aa17.78■□□□□ 0.44
C9orf3-218ENST00000482056 VPS37DQ86XT2 251 aa17.78■□□□□ 0.44
C9orf3-218ENST00000482056 ARAP2Q8WZ64 1704 aa17.78■□□□□ 0.44
C9orf3-218ENST00000482056 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.77■□□□□ 0.44
C9orf3-218ENST00000482056 A0A087WWV3 80 aa17.77■□□□□ 0.44
C9orf3-218ENST00000482056 FAM177BA6PVY3 158 aa17.77■□□□□ 0.44
C9orf3-218ENST00000482056 GOLGA8AA7E2F4 631 aa17.77■□□□□ 0.44
C9orf3-218ENST00000482056 SMC2O95347 1197 aa17.77■□□□□ 0.44
C9orf3-218ENST00000482056 IARSP41252 1262 aaKnown RBP17.77■□□□□ 0.44
C9orf3-218ENST00000482056 SYKP43405 635 aa17.77■□□□□ 0.44
C9orf3-218ENST00000482056 HSPA2P54652 639 aa17.77■□□□□ 0.44
C9orf3-218ENST00000482056 MAP3K12Q12852 859 aa17.77■□□□□ 0.44
C9orf3-218ENST00000482056 WASF1Q92558 559 aa17.77■□□□□ 0.44
C9orf3-218ENST00000482056 CNNM2Q9H8M5 875 aa17.77■□□□□ 0.44
C9orf3-218ENST00000482056 KCND1Q9NSA2 647 aa17.77■□□□□ 0.44
C9orf3-218ENST00000482056 B4E1Z4 1266 aa17.77■□□□□ 0.43
C9orf3-218ENST00000482056 PHKA1P46020 1223 aa17.77■□□□□ 0.43
C9orf3-218ENST00000482056 TMEM67Q5HYA8 995 aa17.77■□□□□ 0.43
C9orf3-218ENST00000482056 SGMS1Q86VZ5 419 aa17.77■□□□□ 0.43
C9orf3-218ENST00000482056 MICU3Q86XE3 530 aa17.77■□□□□ 0.43
C9orf3-218ENST00000482056 STRBPQ96SI9 672 aaKnown RBP17.77■□□□□ 0.43
C9orf3-218ENST00000482056 CHD4Q14839 1912 aa17.76■□□□□ 0.43
C9orf3-218ENST00000482056 BCL9O00512 1426 aa17.76■□□□□ 0.43
C9orf3-218ENST00000482056 MYO5AQ9Y4I1 1855 aaKnown RBP17.76■□□□□ 0.43
C9orf3-218ENST00000482056 STK36Q9NRP7 1315 aa17.76■□□□□ 0.43
C9orf3-218ENST00000482056 TCRBV5S4A2TA0A5A2 114 aa17.76■□□□□ 0.43
C9orf3-218ENST00000482056 PATL2C9JE40 543 aaKnown RBP17.76■□□□□ 0.43
C9orf3-218ENST00000482056 IKBKBO14920 756 aa17.76■□□□□ 0.43
C9orf3-218ENST00000482056 CCZ1BP86790 482 aa17.76■□□□□ 0.43
C9orf3-218ENST00000482056 CCZ1P86791 482 aaPredicted RBP17.76■□□□□ 0.43
C9orf3-218ENST00000482056 PPP4R3BQ5MIZ7 849 aa17.76■□□□□ 0.43
C9orf3-218ENST00000482056 SMAP1Q8IYB5 467 aaPredicted RBP17.76■□□□□ 0.43
C9orf3-218ENST00000482056 KRT23Q9C075 422 aa17.76■□□□□ 0.43
C9orf3-218ENST00000482056 NAPBQ9H115 298 aa17.76■□□□□ 0.43
C9orf3-218ENST00000482056 GJB4Q9NTQ9 266 aa17.76■□□□□ 0.43
C9orf3-218ENST00000482056 LRP5O75197 1615 aa17.75■□□□□ 0.43
C9orf3-218ENST00000482056 IL6STP40189 918 aaPredicted RBP17.75■□□□□ 0.43
C9orf3-218ENST00000482056 LIFRP42702 1097 aa17.75■□□□□ 0.43
C9orf3-218ENST00000482056 SSRP1Q08945 709 aaKnown RBP17.75■□□□□ 0.43
C9orf3-218ENST00000482056 ARID5BQ14865 1188 aa17.75■□□□□ 0.43
C9orf3-218ENST00000482056 DZIP3Q86Y13 1208 aaKnown RBP17.75■□□□□ 0.43
C9orf3-218ENST00000482056 SPATA5Q8NB90 893 aa17.75■□□□□ 0.43
C9orf3-218ENST00000482056 IGDCC4Q8TDY8 1250 aa17.75■□□□□ 0.43
C9orf3-218ENST00000482056 ZMYND15Q9H091 742 aa17.75■□□□□ 0.43
C9orf3-218ENST00000482056 WWC3Q9ULE0 1092 aa17.75■□□□□ 0.43
C9orf3-218ENST00000482056 SLC12A7Q9Y666 1083 aa17.75■□□□□ 0.43
C9orf3-218ENST00000482056 NEDD4P46934 1319 aa17.75■□□□□ 0.43
C9orf3-218ENST00000482056 MARCKSP29966 332 aaPredicted RBP17.75■□□□□ 0.43
C9orf3-218ENST00000482056 ZNF592Q92610 1267 aa17.75■□□□□ 0.43
C9orf3-218ENST00000482056 LY9Q9HBG7 655 aa17.75■□□□□ 0.43
C9orf3-218ENST00000482056 ZBTB1Q9Y2K1 713 aa17.75■□□□□ 0.43
C9orf3-218ENST00000482056 ECM29Q5VYK3 1845 aa17.74■□□□□ 0.43
C9orf3-218ENST00000482056 BIN1O00499 593 aa17.74■□□□□ 0.43
C9orf3-218ENST00000482056 IFIT3O14879 490 aaKnown RBP17.74■□□□□ 0.43
C9orf3-218ENST00000482056 CUTAO60888 179 aa17.74■□□□□ 0.43
C9orf3-218ENST00000482056 WDHD1O75717 1129 aaPredicted RBP17.74■□□□□ 0.43
C9orf3-218ENST00000482056 FGFR2P21802 821 aa17.74■□□□□ 0.43
C9orf3-218ENST00000482056 NYAP1Q6ZVC0 841 aa17.74■□□□□ 0.43
C9orf3-218ENST00000482056 CCAR2Q8N163 923 aaKnown RBP17.74■□□□□ 0.43
C9orf3-218ENST00000482056 XPO4Q9C0E2 1151 aaKnown RBP17.74■□□□□ 0.43
C9orf3-218ENST00000482056 IFNKQ9P0W0 207 aa17.74■□□□□ 0.43
C9orf3-218ENST00000482056 MROH7-TTC4A0A0A0MT08 1334 aa17.74■□□□□ 0.43
C9orf3-218ENST00000482056 DOCK2Q92608 1830 aa17.73■□□□□ 0.43
C9orf3-218ENST00000482056 FAM237AA0A1B0GTK4 181 aa17.73■□□□□ 0.43
C9orf3-218ENST00000482056 CBFA2T2O43439 604 aa17.73■□□□□ 0.43
C9orf3-218ENST00000482056 GNAT2P19087 354 aa17.73■□□□□ 0.43
C9orf3-218ENST00000482056 U2AF2P26368 475 aaKnown RBP eCLIP17.73■□□□□ 0.43
C9orf3-218ENST00000482056 CDC27P30260 824 aa17.73■□□□□ 0.43
C9orf3-218ENST00000482056 SART3Q15020 963 aaKnown RBP17.73■□□□□ 0.43
C9orf3-218ENST00000482056 SAFBQ15424 915 aaKnown RBP eCLIP17.73■□□□□ 0.43
C9orf3-218ENST00000482056 NBPF11Q86T75 865 aa17.73■□□□□ 0.43
C9orf3-218ENST00000482056 IFNL3Q8IZI9 196 aa17.73■□□□□ 0.43
C9orf3-218ENST00000482056 PHKBQ93100 1093 aa17.73■□□□□ 0.43
C9orf3-218ENST00000482056 AIFM3Q96NN9 605 aa17.73■□□□□ 0.43
C9orf3-218ENST00000482056 NACAP1Q9BZK3 213 aa17.73■□□□□ 0.43
C9orf3-218ENST00000482056 BTG4Q9NY30 223 aa17.73■□□□□ 0.43
C9orf3-218ENST00000482056 HOOK1Q9UJC3 728 aaKnown RBP17.73■□□□□ 0.43
C9orf3-218ENST00000482056 HPSEQ9Y251 543 aa17.73■□□□□ 0.43
C9orf3-218ENST00000482056 NHSL1Q5SYE7 1610 aa17.73■□□□□ 0.43
C9orf3-218ENST00000482056 MYO1BO43795 1136 aa17.73■□□□□ 0.43
C9orf3-218ENST00000482056 SFPQP23246 707 aaKnown RBP eCLIP17.73■□□□□ 0.43
C9orf3-218ENST00000482056 NCBP1Q09161 790 aaKnown RBP17.73■□□□□ 0.43
C9orf3-218ENST00000482056 RESP18Q5W5W9 173 aa17.73■□□□□ 0.43
C9orf3-218ENST00000482056 OLFM4Q6UX06 510 aa17.73■□□□□ 0.43
C9orf3-218ENST00000482056 TMC6Q7Z403 805 aa17.73■□□□□ 0.43
C9orf3-218ENST00000482056 ZNF34Q8IZ26 560 aa17.73■□□□□ 0.43
C9orf3-218ENST00000482056 MAGEB6Q8N7X4 407 aa17.73■□□□□ 0.43
C9orf3-218ENST00000482056 TUBE1Q9UJT0 475 aa17.73■□□□□ 0.43
C9orf3-218ENST00000482056 TIAM2Q8IVF5 1701 aa17.72■□□□□ 0.43
C9orf3-218ENST00000482056 MBD4O95243 580 aa17.72■□□□□ 0.43
C9orf3-218ENST00000482056 FMNL1O95466 1100 aaPredicted RBP17.72■□□□□ 0.43
C9orf3-218ENST00000482056 RXRAP19793 462 aa17.72■□□□□ 0.43
C9orf3-218ENST00000482056 PTPAQ15257 358 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms