RNA–Protein interactions for RNA: ENST00000482013.1

GGPS1-205, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 4

Gene GGPS1, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-205ENST00000482013 NBPF3Q9H094 633 aa13.8□□□□□ -0.2
GGPS1-205ENST00000482013 ATP8A2Q9NTI2 1148 aa13.8□□□□□ -0.2
GGPS1-205ENST00000482013 SUGT1Q9Y2Z0 365 aa13.8□□□□□ -0.2
GGPS1-205ENST00000482013 FAM205AQ6ZU69 1335 aa13.8□□□□□ -0.2
GGPS1-205ENST00000482013 C6orf229H3BNL8 230 aa13.79□□□□□ -0.2
GGPS1-205ENST00000482013 STX6O43752 255 aa13.79□□□□□ -0.2
GGPS1-205ENST00000482013 SYT1P21579 422 aa13.79□□□□□ -0.2
GGPS1-205ENST00000482013 PPP4CP60510 307 aa13.79□□□□□ -0.2
GGPS1-205ENST00000482013 HMGN5P82970 282 aaKnown RBP13.79□□□□□ -0.2
GGPS1-205ENST00000482013 PKP1Q13835 747 aa13.79□□□□□ -0.2
GGPS1-205ENST00000482013 GRIPAP1Q4V328 841 aa13.79□□□□□ -0.2
GGPS1-205ENST00000482013 CC2D2BQ6DHV5 1058 aa13.79□□□□□ -0.2
GGPS1-205ENST00000482013 MFSD6Q6ZSS7 791 aa13.79□□□□□ -0.2
GGPS1-205ENST00000482013 ADGRA1Q86SQ6 560 aa13.79□□□□□ -0.2
GGPS1-205ENST00000482013 DZIP1Q86YF9 867 aaKnown RBP13.79□□□□□ -0.2
GGPS1-205ENST00000482013 C2CD5Q86YS7 1000 aa13.79□□□□□ -0.2
GGPS1-205ENST00000482013 TBC1D10CQ8IV04 446 aa13.79□□□□□ -0.2
GGPS1-205ENST00000482013 NECAB1Q8N987 351 aa13.79□□□□□ -0.2
GGPS1-205ENST00000482013 MIGA1Q8NAN2 632 aa13.79□□□□□ -0.2
GGPS1-205ENST00000482013 RGS22Q8NE09 1264 aa13.79□□□□□ -0.2
GGPS1-205ENST00000482013 ZNF384Q8TF68 577 aa13.79□□□□□ -0.2
GGPS1-205ENST00000482013 CNKSR1Q969H4 720 aa13.79□□□□□ -0.2
GGPS1-205ENST00000482013 EYA3Q99504 573 aa13.79□□□□□ -0.2
GGPS1-205ENST00000482013 KIF3AQ9Y496 699 aa13.79□□□□□ -0.2
GGPS1-205ENST00000482013 ATP6V1DQ9Y5K8 247 aa13.79□□□□□ -0.2
GGPS1-205ENST00000482013 PRKAB2O43741 272 aa13.78□□□□□ -0.2
GGPS1-205ENST00000482013 DHX16O60231 1041 aaKnown RBP13.78□□□□□ -0.2
GGPS1-205ENST00000482013 BAG3O95817 575 aa13.78□□□□□ -0.2
GGPS1-205ENST00000482013 ZSCAN22P10073 491 aaPredicted RBP13.78□□□□□ -0.2
GGPS1-205ENST00000482013 PRDX5P30044 214 aa13.78□□□□□ -0.2
GGPS1-205ENST00000482013 SBK1Q52WX2 424 aa13.78□□□□□ -0.2
GGPS1-205ENST00000482013 SMARCC2Q8TAQ2 1214 aa13.78□□□□□ -0.2
GGPS1-205ENST00000482013 FAM163AQ96GL9 167 aaPredicted RBP13.78□□□□□ -0.2
GGPS1-205ENST00000482013 MYH2Q9UKX2 1941 aa13.78□□□□□ -0.2
GGPS1-205ENST00000482013 PDIA3P30101 505 aaKnown RBP13.77□□□□□ -0.21
GGPS1-205ENST00000482013 LIFRP42702 1097 aa13.77□□□□□ -0.21
GGPS1-205ENST00000482013 ANTXR2P58335 489 aa13.77□□□□□ -0.21
GGPS1-205ENST00000482013 PPARAQ07869 468 aa13.77□□□□□ -0.21
GGPS1-205ENST00000482013 APOBRQ0VD83 1088 aa13.77□□□□□ -0.21
GGPS1-205ENST00000482013 MSL1Q68DK7 614 aa13.77□□□□□ -0.21
GGPS1-205ENST00000482013 DPP8Q6V1X1 898 aaPredicted RBP13.77□□□□□ -0.21
GGPS1-205ENST00000482013 TMTC2Q8N394 836 aa13.77□□□□□ -0.21
GGPS1-205ENST00000482013 NOL10Q9BSC4 688 aaKnown RBP13.77□□□□□ -0.21
GGPS1-205ENST00000482013 LRRC2Q9BYS8 371 aa13.77□□□□□ -0.21
GGPS1-205ENST00000482013 ZC3H12CQ9C0D7 883 aaKnown RBP13.77□□□□□ -0.21
GGPS1-205ENST00000482013 ANGEL1Q9UNK9 670 aaKnown RBP13.77□□□□□ -0.21
GGPS1-205ENST00000482013 TRAK2O60296 914 aa13.76□□□□□ -0.21
GGPS1-205ENST00000482013 FGRP09769 529 aa13.76□□□□□ -0.21
GGPS1-205ENST00000482013 PLCG2P16885 1265 aa13.76□□□□□ -0.21
GGPS1-205ENST00000482013 DYNLL1P63167 89 aaKnown RBP13.76□□□□□ -0.21
GGPS1-205ENST00000482013 SCRN1Q12765 414 aa13.76□□□□□ -0.21
GGPS1-205ENST00000482013 STK3Q13188 491 aa13.76□□□□□ -0.21
GGPS1-205ENST00000482013 SART3Q15020 963 aaKnown RBP13.76□□□□□ -0.21
GGPS1-205ENST00000482013 LARP1BQ659C4 914 aaKnown RBP13.76□□□□□ -0.21
GGPS1-205ENST00000482013 ZNF622Q969S3 477 aaKnown RBP eCLIP13.76□□□□□ -0.21
GGPS1-205ENST00000482013 LAMB1P07942 1786 aa13.76□□□□□ -0.21
GGPS1-205ENST00000482013 DLEC1Q9Y238 1755 aa13.76□□□□□ -0.21
GGPS1-205ENST00000482013 BAZ2AQ9UIF9 1905 aaKnown RBP13.75□□□□□ -0.21
GGPS1-205ENST00000482013 B4E1Z4 1266 aa13.75□□□□□ -0.21
GGPS1-205ENST00000482013 SH2B2O14492 632 aaPredicted RBP13.75□□□□□ -0.21
GGPS1-205ENST00000482013 F13A1P00488 732 aa13.75□□□□□ -0.21
GGPS1-205ENST00000482013 SLC3A2P08195 630 aaKnown RBP13.75□□□□□ -0.21
GGPS1-205ENST00000482013 RCAN1P53805 252 aa13.75□□□□□ -0.21
GGPS1-205ENST00000482013 CTDSPL2Q05D32 466 aa13.75□□□□□ -0.21
GGPS1-205ENST00000482013 CYB5R4Q7L1T6 521 aa13.75□□□□□ -0.21
GGPS1-205ENST00000482013 SGMS1Q86VZ5 419 aa13.75□□□□□ -0.21
GGPS1-205ENST00000482013 IGDCC4Q8TDY8 1250 aa13.75□□□□□ -0.21
GGPS1-205ENST00000482013 RTFDC1Q9BY42 306 aaPredicted RBP13.75□□□□□ -0.21
GGPS1-205ENST00000482013 ARPP21Q9UBL0 812 aaPredicted RBP13.75□□□□□ -0.21
GGPS1-205ENST00000482013 MTMR6Q9Y217 621 aa13.75□□□□□ -0.21
GGPS1-205ENST00000482013 SLX4Q8IY92 1834 aa13.74□□□□□ -0.21
GGPS1-205ENST00000482013 MROH7-TTC4A0A0A0MT08 1334 aa13.74□□□□□ -0.21
GGPS1-205ENST00000482013 NEDD4P46934 1319 aa13.74□□□□□ -0.21
GGPS1-205ENST00000482013 GPR75-ASB3A0A0A6YYF3 556 aa13.74□□□□□ -0.21
GGPS1-205ENST00000482013 FKBP1AP62942 108 aaKnown RBP13.74□□□□□ -0.21
GGPS1-205ENST00000482013 MCTP1Q6DN14 999 aa13.74□□□□□ -0.21
GGPS1-205ENST00000482013 CTR9Q6PD62 1173 aa13.74□□□□□ -0.21
GGPS1-205ENST00000482013 CHST3Q7LGC8 479 aa13.74□□□□□ -0.21
GGPS1-205ENST00000482013 NSUN7Q8NE18 718 aaKnown RBP13.74□□□□□ -0.21
GGPS1-205ENST00000482013 SUPT20HQ8NEM7 779 aa13.74□□□□□ -0.21
GGPS1-205ENST00000482013 SDR42E1Q8WUS8 393 aa13.74□□□□□ -0.21
GGPS1-205ENST00000482013 ESR2Q92731 530 aa13.74□□□□□ -0.21
GGPS1-205ENST00000482013 GPR101Q96P66 508 aaPredicted RBP13.74□□□□□ -0.21
GGPS1-205ENST00000482013 DCP1AQ9NPI6 582 aaPredicted RBP13.74□□□□□ -0.21
GGPS1-205ENST00000482013 AATFQ9NY61 560 aaKnown RBP eCLIP13.74□□□□□ -0.21
GGPS1-205ENST00000482013 ZSWIM5Q9P217 1185 aa13.74□□□□□ -0.21
GGPS1-205ENST00000482013 C10orf71Q711Q0 1435 aa13.73□□□□□ -0.21
GGPS1-205ENST00000482013 KLF18A0A0U1RQI7 1052 aa13.73□□□□□ -0.21
GGPS1-205ENST00000482013 ERICH2A1L162 156 aa13.73□□□□□ -0.21
GGPS1-205ENST00000482013 ORC4O43929 436 aa13.73□□□□□ -0.21
GGPS1-205ENST00000482013 CSPP1Q1MSJ5 1256 aa13.73□□□□□ -0.21
GGPS1-205ENST00000482013 MFSD14BQ5SR56 506 aa13.73□□□□□ -0.21
GGPS1-205ENST00000482013 PODNQ7Z5L7 613 aa13.73□□□□□ -0.21
GGPS1-205ENST00000482013 DEFB132Q7Z7B7 95 aa13.73□□□□□ -0.21
GGPS1-205ENST00000482013 FAM184AQ8NB25 1140 aa13.73□□□□□ -0.21
GGPS1-205ENST00000482013 LMBRD1Q9NUN5 540 aa13.73□□□□□ -0.21
GGPS1-205ENST00000482013 BRPF3Q9ULD4 1205 aa13.73□□□□□ -0.21
GGPS1-205ENST00000482013 KIF13BQ9NQT8 1826 aa13.73□□□□□ -0.21
GGPS1-205ENST00000482013 NID2Q14112 1375 aa13.72□□□□□ -0.21
GGPS1-205ENST00000482013 GAKO14976 1311 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms