RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 DZIP1Q86YF9 867 aaKnown RBP13.01□□□□□ -0.33
VTI1A-204ENST00000480057 ZNF384Q8TF68 577 aa13.01□□□□□ -0.33
VTI1A-204ENST00000480057 STAG1Q8WVM7 1258 aa13.01□□□□□ -0.33
VTI1A-204ENST00000480057 BRF1Q92994 677 aa13.01□□□□□ -0.33
VTI1A-204ENST00000480057 TMEM87BQ96K49 555 aa13.01□□□□□ -0.33
VTI1A-204ENST00000480057 EYA3Q99504 573 aa13.01□□□□□ -0.33
VTI1A-204ENST00000480057 CRNKL1Q9BZJ0 848 aaKnown RBP13.01□□□□□ -0.33
VTI1A-204ENST00000480057 KRT23Q9C075 422 aa13.01□□□□□ -0.33
VTI1A-204ENST00000480057 NBPF3Q9H094 633 aa13.01□□□□□ -0.33
VTI1A-204ENST00000480057 POLLQ9UGP5 575 aa13.01□□□□□ -0.33
VTI1A-204ENST00000480057 C10orf71Q711Q0 1435 aa13.01□□□□□ -0.33
VTI1A-204ENST00000480057 CHD4Q14839 1912 aa13.01□□□□□ -0.33
VTI1A-204ENST00000480057 DLEC1Q9Y238 1755 aa13□□□□□ -0.33
VTI1A-204ENST00000480057 PRC1O43663 620 aa13□□□□□ -0.33
VTI1A-204ENST00000480057 PRDX5P30044 214 aa13□□□□□ -0.33
VTI1A-204ENST00000480057 PPP4CP60510 307 aa13□□□□□ -0.33
VTI1A-204ENST00000480057 HAND2P61296 217 aa13□□□□□ -0.33
VTI1A-204ENST00000480057 COL9A3Q14050 684 aaPredicted RBP13□□□□□ -0.33
VTI1A-204ENST00000480057 AKNAD1Q5T1N1 836 aa13□□□□□ -0.33
VTI1A-204ENST00000480057 TBC1D10CQ8IV04 446 aa13□□□□□ -0.33
VTI1A-204ENST00000480057 SLF2Q8IX21 1173 aa13□□□□□ -0.33
VTI1A-204ENST00000480057 MIGA1Q8NAN2 632 aa13□□□□□ -0.33
VTI1A-204ENST00000480057 TCEANC2Q96MN5 208 aa13□□□□□ -0.33
VTI1A-204ENST00000480057 ATP8A2Q9NTI2 1148 aa13□□□□□ -0.33
VTI1A-204ENST00000480057 ZDHHC9Q9Y397 364 aa13□□□□□ -0.33
VTI1A-204ENST00000480057 C6orf229H3BNL8 230 aa12.99□□□□□ -0.33
VTI1A-204ENST00000480057 PRKAB2O43741 272 aa12.99□□□□□ -0.33
VTI1A-204ENST00000480057 BAG4O95429 457 aaKnown RBP12.99□□□□□ -0.33
VTI1A-204ENST00000480057 GJB2P29033 226 aa12.99□□□□□ -0.33
VTI1A-204ENST00000480057 SKOR2Q2VWA4 1001 aaPredicted RBP12.99□□□□□ -0.33
VTI1A-204ENST00000480057 DPP8Q6V1X1 898 aaPredicted RBP12.99□□□□□ -0.33
VTI1A-204ENST00000480057 FAM163AQ96GL9 167 aaPredicted RBP12.99□□□□□ -0.33
VTI1A-204ENST00000480057 ZC3H12CQ9C0D7 883 aaKnown RBP12.99□□□□□ -0.33
VTI1A-204ENST00000480057 KIF3AQ9Y496 699 aa12.99□□□□□ -0.33
VTI1A-204ENST00000480057 STX6O43752 255 aa12.98□□□□□ -0.33
VTI1A-204ENST00000480057 BAG3O95817 575 aa12.98□□□□□ -0.33
VTI1A-204ENST00000480057 FGRP09769 529 aa12.98□□□□□ -0.33
VTI1A-204ENST00000480057 ANTXR2P58335 489 aa12.98□□□□□ -0.33
VTI1A-204ENST00000480057 HMGN5P82970 282 aaKnown RBP12.98□□□□□ -0.33
VTI1A-204ENST00000480057 PPARAQ07869 468 aa12.98□□□□□ -0.33
VTI1A-204ENST00000480057 PKP1Q13835 747 aa12.98□□□□□ -0.33
VTI1A-204ENST00000480057 SBK1Q52WX2 424 aa12.98□□□□□ -0.33
VTI1A-204ENST00000480057 MFSD6Q6ZSS7 791 aa12.98□□□□□ -0.33
VTI1A-204ENST00000480057 DEFB132Q7Z7B7 95 aa12.98□□□□□ -0.33
VTI1A-204ENST00000480057 NECAB1Q8N987 351 aa12.98□□□□□ -0.33
VTI1A-204ENST00000480057 RGS22Q8NE09 1264 aa12.98□□□□□ -0.33
VTI1A-204ENST00000480057 SMARCC2Q8TAQ2 1214 aa12.98□□□□□ -0.33
VTI1A-204ENST00000480057 ZNF622Q969S3 477 aaKnown RBP eCLIP12.98□□□□□ -0.33
VTI1A-204ENST00000480057 LARP6Q9BRS8 491 aaKnown RBP12.98□□□□□ -0.33
VTI1A-204ENST00000480057 NOL10Q9BSC4 688 aaKnown RBP12.98□□□□□ -0.33
VTI1A-204ENST00000480057 RTFDC1Q9BY42 306 aaPredicted RBP12.98□□□□□ -0.33
VTI1A-204ENST00000480057 ATP6V1DQ9Y5K8 247 aa12.98□□□□□ -0.33
VTI1A-204ENST00000480057 LAMB1P07942 1786 aa12.98□□□□□ -0.33
VTI1A-204ENST00000480057 KIF13BQ9NQT8 1826 aa12.97□□□□□ -0.33
VTI1A-204ENST00000480057 MROH7-TTC4A0A0A0MT08 1334 aa12.97□□□□□ -0.33
VTI1A-204ENST00000480057 SH2B2O14492 632 aaPredicted RBP12.97□□□□□ -0.33
VTI1A-204ENST00000480057 DHX16O60231 1041 aaKnown RBP12.97□□□□□ -0.33
VTI1A-204ENST00000480057 ZSCAN22P10073 491 aaPredicted RBP12.97□□□□□ -0.33
VTI1A-204ENST00000480057 PLCG2P16885 1265 aa12.97□□□□□ -0.33
VTI1A-204ENST00000480057 SYT1P21579 422 aa12.97□□□□□ -0.33
VTI1A-204ENST00000480057 PDIA3P30101 505 aaKnown RBP12.97□□□□□ -0.33
VTI1A-204ENST00000480057 FKBP1AP62942 108 aaKnown RBP12.97□□□□□ -0.33
VTI1A-204ENST00000480057 DYNLL1P63167 89 aaKnown RBP12.97□□□□□ -0.33
VTI1A-204ENST00000480057 SGMS1Q86VZ5 419 aa12.97□□□□□ -0.33
VTI1A-204ENST00000480057 ARPP21Q9UBL0 812 aaPredicted RBP12.97□□□□□ -0.33
VTI1A-204ENST00000480057 ANGEL1Q9UNK9 670 aaKnown RBP12.97□□□□□ -0.33
VTI1A-204ENST00000480057 GAKO14976 1311 aa12.96□□□□□ -0.33
VTI1A-204ENST00000480057 SLC3A2P08195 630 aaKnown RBP12.96□□□□□ -0.33
VTI1A-204ENST00000480057 LIFRP42702 1097 aa12.96□□□□□ -0.33
VTI1A-204ENST00000480057 RCAN1P53805 252 aa12.96□□□□□ -0.33
VTI1A-204ENST00000480057 APOBRQ0VD83 1088 aa12.96□□□□□ -0.33
VTI1A-204ENST00000480057 SCRN1Q12765 414 aa12.96□□□□□ -0.33
VTI1A-204ENST00000480057 PODNQ7Z5L7 613 aa12.96□□□□□ -0.33
VTI1A-204ENST00000480057 SLC51AQ86UW1 340 aa12.96□□□□□ -0.33
VTI1A-204ENST00000480057 TMTC2Q8N394 836 aa12.96□□□□□ -0.33
VTI1A-204ENST00000480057 SUPT20HQ8NEM7 779 aa12.96□□□□□ -0.33
VTI1A-204ENST00000480057 GPR101Q96P66 508 aaPredicted RBP12.96□□□□□ -0.33
VTI1A-204ENST00000480057 SNED1Q8TER0 1413 aa12.96□□□□□ -0.34
VTI1A-204ENST00000480057 NID2Q14112 1375 aa12.95□□□□□ -0.34
VTI1A-204ENST00000480057 SLX4Q8IY92 1834 aa12.95□□□□□ -0.34
VTI1A-204ENST00000480057 NEDD4P46934 1319 aa12.95□□□□□ -0.34
VTI1A-204ENST00000480057 GPR75-ASB3A0A0A6YYF3 556 aa12.95□□□□□ -0.34
VTI1A-204ENST00000480057 SART3Q15020 963 aaKnown RBP12.95□□□□□ -0.34
VTI1A-204ENST00000480057 MFSD14BQ5SR56 506 aa12.95□□□□□ -0.34
VTI1A-204ENST00000480057 CYB5R4Q7L1T6 521 aa12.95□□□□□ -0.34
VTI1A-204ENST00000480057 IGDCC4Q8TDY8 1250 aa12.95□□□□□ -0.34
VTI1A-204ENST00000480057 SDR42E1Q8WUS8 393 aa12.95□□□□□ -0.34
VTI1A-204ENST00000480057 C7orf43Q8WVR3 580 aa12.95□□□□□ -0.34
VTI1A-204ENST00000480057 ESR2Q92731 530 aa12.95□□□□□ -0.34
VTI1A-204ENST00000480057 LRRC2Q9BYS8 371 aa12.95□□□□□ -0.34
VTI1A-204ENST00000480057 DCP1AQ9NPI6 582 aaPredicted RBP12.95□□□□□ -0.34
VTI1A-204ENST00000480057 AATFQ9NY61 560 aaKnown RBP eCLIP12.95□□□□□ -0.34
VTI1A-204ENST00000480057 MYH2Q9UKX2 1941 aa12.94□□□□□ -0.34
VTI1A-204ENST00000480057 B4E1Z4 1266 aa12.94□□□□□ -0.34
VTI1A-204ENST00000480057 ORC4O43929 436 aa12.94□□□□□ -0.34
VTI1A-204ENST00000480057 F13A1P00488 732 aa12.94□□□□□ -0.34
VTI1A-204ENST00000480057 CTDSPL2Q05D32 466 aa12.94□□□□□ -0.34
VTI1A-204ENST00000480057 STK3Q13188 491 aa12.94□□□□□ -0.34
VTI1A-204ENST00000480057 LARP1BQ659C4 914 aaKnown RBP12.94□□□□□ -0.34
VTI1A-204ENST00000480057 CTR9Q6PD62 1173 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms