RNA–Protein interactions for RNA: ENST00000479307.5

RFC4-212, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,043 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-212ENST00000479307 NRSN2Q9GZP1 204 aa7.84□□□□□ -1.15
RFC4-212ENST00000479307 MIR1-1HGQ9H1L0 117 aa7.84□□□□□ -1.15
RFC4-212ENST00000479307 ADAMTS1Q9UHI8 967 aa7.84□□□□□ -1.15
RFC4-212ENST00000479307 TLR6Q9Y2C9 796 aa7.84□□□□□ -1.15
RFC4-212ENST00000479307 SUPT16HQ9Y5B9 1047 aaKnown RBP7.84□□□□□ -1.15
RFC4-212ENST00000479307 TM4SF5O14894 197 aa7.83□□□□□ -1.16
RFC4-212ENST00000479307 TRIM37O94972 964 aa7.83□□□□□ -1.16
RFC4-212ENST00000479307 SNAP47Q5SQN1 464 aa7.83□□□□□ -1.16
RFC4-212ENST00000479307 HGSNATQ68CP4 663 aa7.83□□□□□ -1.16
RFC4-212ENST00000479307 CYB5RLQ6IPT4 315 aa7.83□□□□□ -1.16
RFC4-212ENST00000479307 LINC00114Q6XXX2 140 aa7.83□□□□□ -1.16
RFC4-212ENST00000479307 ZNF296Q8WUU4 475 aaPredicted RBP7.83□□□□□ -1.16
RFC4-212ENST00000479307 CARD10Q9BWT7 1032 aa7.83□□□□□ -1.16
RFC4-212ENST00000479307 CBX8Q9HC52 389 aa7.83□□□□□ -1.16
RFC4-212ENST00000479307 KRT82Q9NSB4 513 aa7.83□□□□□ -1.16
RFC4-212ENST00000479307 ROBO2Q9HCK4 1378 aa7.83□□□□□ -1.16
RFC4-212ENST00000479307 CEP164Q9UPV0 1460 aa7.82□□□□□ -1.16
RFC4-212ENST00000479307 F6X3S4 739 aa7.82□□□□□ -1.16
RFC4-212ENST00000479307 GREM1O60565 184 aa7.82□□□□□ -1.16
RFC4-212ENST00000479307 GARTP22102 1010 aa7.82□□□□□ -1.16
RFC4-212ENST00000479307 CD68P34810 354 aaPredicted RBP7.82□□□□□ -1.16
RFC4-212ENST00000479307 PAK2Q13177 524 aa7.82□□□□□ -1.16
RFC4-212ENST00000479307 POU4F3Q15319 338 aa7.82□□□□□ -1.16
RFC4-212ENST00000479307 FBXO11Q86XK2 927 aa7.82□□□□□ -1.16
RFC4-212ENST00000479307 VPS37DQ86XT2 251 aa7.82□□□□□ -1.16
RFC4-212ENST00000479307 FMR1NBQ8N0W7 255 aaPredicted RBP7.82□□□□□ -1.16
RFC4-212ENST00000479307 GALNT11Q8NCW6 608 aa7.82□□□□□ -1.16
RFC4-212ENST00000479307 RASGRP4Q8TDF6 673 aa7.82□□□□□ -1.16
RFC4-212ENST00000479307 STK35Q8TDR2 534 aa7.82□□□□□ -1.16
RFC4-212ENST00000479307 SREK1Q8WXA9 508 aaKnown RBP7.82□□□□□ -1.16
RFC4-212ENST00000479307 GPRASP2Q96D09 838 aa7.82□□□□□ -1.16
RFC4-212ENST00000479307 TRIM11Q96F44 468 aa7.82□□□□□ -1.16
RFC4-212ENST00000479307 KLHDC7BQ96G42 594 aa7.82□□□□□ -1.16
RFC4-212ENST00000479307 NT5C1AQ9BXI3 368 aa7.82□□□□□ -1.16
RFC4-212ENST00000479307 NOP53Q9NZM5 478 aaKnown RBP7.82□□□□□ -1.16
RFC4-212ENST00000479307 CADPSQ9ULU8 1353 aa7.82□□□□□ -1.16
RFC4-212ENST00000479307 A0A0A0MRY4 1105 aa7.81□□□□□ -1.16
RFC4-212ENST00000479307 DEAF1O75398 565 aaPredicted RBP7.81□□□□□ -1.16
RFC4-212ENST00000479307 TNNI2P48788 182 aa7.81□□□□□ -1.16
RFC4-212ENST00000479307 SNRPNP63162 240 aaKnown RBP7.81□□□□□ -1.16
RFC4-212ENST00000479307 FBXL19Q6PCT2 694 aa7.81□□□□□ -1.16
RFC4-212ENST00000479307 PODNQ7Z5L7 613 aa7.81□□□□□ -1.16
RFC4-212ENST00000479307 GOLM1Q8NBJ4 401 aa7.81□□□□□ -1.16
RFC4-212ENST00000479307 CACNA2D2Q9NY47 1150 aa7.81□□□□□ -1.16
RFC4-212ENST00000479307 MAOBP27338 520 aa7.8□□□□□ -1.16
RFC4-212ENST00000479307 FAM160A1Q05DH4 1040 aa7.8□□□□□ -1.16
RFC4-212ENST00000479307 KCNMA1Q12791 1236 aa7.8□□□□□ -1.16
RFC4-212ENST00000479307 RASIP1Q5U651 963 aa7.8□□□□□ -1.16
RFC4-212ENST00000479307 FAM196AQ6ZSG2 479 aa7.8□□□□□ -1.16
RFC4-212ENST00000479307 GRIN3AQ8TCU5 1115 aa7.8□□□□□ -1.16
RFC4-212ENST00000479307 GATAD2BQ8WXI9 593 aa7.8□□□□□ -1.16
RFC4-212ENST00000479307 GAL3ST3Q96A11 431 aa7.8□□□□□ -1.16
RFC4-212ENST00000479307 GMLQ99445 158 aa7.8□□□□□ -1.16
RFC4-212ENST00000479307 PLVAPQ9BX97 442 aa7.8□□□□□ -1.16
RFC4-212ENST00000479307 LRRC3Q9BY71 257 aa7.8□□□□□ -1.16
RFC4-212ENST00000479307 PCDHB5Q9Y5E4 795 aa7.8□□□□□ -1.16
RFC4-212ENST00000479307 DLL1O00548 723 aa7.79□□□□□ -1.16
RFC4-212ENST00000479307 NLRP12P59046 1061 aa7.79□□□□□ -1.16
RFC4-212ENST00000479307 COL9A2Q14055 689 aaPredicted RBP7.79□□□□□ -1.16
RFC4-212ENST00000479307 FOXD4L6Q3SYB3 417 aaPredicted RBP7.79□□□□□ -1.16
RFC4-212ENST00000479307 MAP1SQ66K74 1059 aaPredicted RBP7.79□□□□□ -1.16
RFC4-212ENST00000479307 FOXD4L3Q6VB84 417 aaPredicted RBP7.79□□□□□ -1.16
RFC4-212ENST00000479307 KCNB2Q92953 911 aa7.79□□□□□ -1.16
RFC4-212ENST00000479307 USP26Q9BXU7 913 aa7.79□□□□□ -1.16
RFC4-212ENST00000479307 SYNGAP1Q96PV0 1343 aa7.78□□□□□ -1.16
RFC4-212ENST00000479307 LOC100289279A0A1B0GTE1 492 aa7.78□□□□□ -1.16
RFC4-212ENST00000479307 ELNP15502 786 aa7.78□□□□□ -1.16
RFC4-212ENST00000479307 GSK3AP49840 483 aa7.78□□□□□ -1.16
RFC4-212ENST00000479307 ARID5AQ03989 594 aa7.78□□□□□ -1.16
RFC4-212ENST00000479307 APOBRQ0VD83 1088 aa7.78□□□□□ -1.16
RFC4-212ENST00000479307 TRIM28Q13263 835 aaKnown RBP7.78□□□□□ -1.16
RFC4-212ENST00000479307 MPP2Q14168 576 aa7.78□□□□□ -1.16
RFC4-212ENST00000479307 PRRT3Q5FWE3 981 aa7.78□□□□□ -1.16
RFC4-212ENST00000479307 TMEM151AQ8N4L1 468 aa7.78□□□□□ -1.16
RFC4-212ENST00000479307 BEND7Q8N7W2 519 aaPredicted RBP7.78□□□□□ -1.16
RFC4-212ENST00000479307 EAF1Q96JC9 268 aaPredicted RBP7.78□□□□□ -1.16
RFC4-212ENST00000479307 SEC16BQ96JE7 1060 aa7.78□□□□□ -1.16
RFC4-212ENST00000479307 DRC1Q96MC2 740 aa7.78□□□□□ -1.16
RFC4-212ENST00000479307 RSF1Q96T23 1441 aaPredicted RBP7.78□□□□□ -1.16
RFC4-212ENST00000479307 FAM221AA4D161 298 aa7.77□□□□□ -1.17
RFC4-212ENST00000479307 ADAM11O75078 769 aa7.77□□□□□ -1.17
RFC4-212ENST00000479307 BPNT1O95861 308 aa7.77□□□□□ -1.17
RFC4-212ENST00000479307 F13A1P00488 732 aa7.77□□□□□ -1.17
RFC4-212ENST00000479307 RPL6Q02878 288 aaKnown RBP7.77□□□□□ -1.17
RFC4-212ENST00000479307 SEPT6Q14141 434 aa7.77□□□□□ -1.17
RFC4-212ENST00000479307 PDE3AQ14432 1141 aa7.77□□□□□ -1.17
RFC4-212ENST00000479307 IGF2-ASQ6U949 168 aa7.77□□□□□ -1.17
RFC4-212ENST00000479307 BNC2Q6ZN30 1099 aaPredicted RBP7.77□□□□□ -1.17
RFC4-212ENST00000479307 ACSBG1Q96GR2 724 aa7.77□□□□□ -1.17
RFC4-212ENST00000479307 CHD1O14646 1710 aa7.76□□□□□ -1.17
RFC4-212ENST00000479307 CILPO75339 1184 aa7.76□□□□□ -1.17
RFC4-212ENST00000479307 GDF11O95390 407 aa7.76□□□□□ -1.17
RFC4-212ENST00000479307 ECEL1O95672 775 aa7.76□□□□□ -1.17
RFC4-212ENST00000479307 ATF4P18848 351 aaPredicted RBP7.76□□□□□ -1.17
RFC4-212ENST00000479307 DNAJA1P31689 397 aaKnown RBP7.76□□□□□ -1.17
RFC4-212ENST00000479307 DUOXA2Q1HG44 320 aa7.76□□□□□ -1.17
RFC4-212ENST00000479307 KIF4BQ2VIQ3 1234 aa7.76□□□□□ -1.17
RFC4-212ENST00000479307 SLITRK4Q8IW52 837 aa7.76□□□□□ -1.17
RFC4-212ENST00000479307 GPBAR1Q8TDU6 330 aa7.76□□□□□ -1.17
RFC4-212ENST00000479307 JARID2Q92833 1246 aaPredicted RBP7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms