RNA–Protein interactions for RNA: ENST00000479099.2

RC3H1-204, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-204ENST00000479099 ATP8A1Q9Y2Q0 1164 aa7.45□□□□□ -1.22
RC3H1-204ENST00000479099 SPDYE3A6NKU9 549 aa7.44□□□□□ -1.22
RC3H1-204ENST00000479099 FOXO3O43524 673 aa7.44□□□□□ -1.22
RC3H1-204ENST00000479099 ALDH1L1O75891 902 aa7.44□□□□□ -1.22
RC3H1-204ENST00000479099 SPATA31C1P0DKV0 1188 aa7.44□□□□□ -1.22
RC3H1-204ENST00000479099 CALRP27797 417 aaKnown RBP7.44□□□□□ -1.22
RC3H1-204ENST00000479099 ETFBP38117 255 aa7.44□□□□□ -1.22
RC3H1-204ENST00000479099 EIF1AXP47813 144 aaKnown RBP7.44□□□□□ -1.22
RC3H1-204ENST00000479099 TYRO3Q06418 890 aa7.44□□□□□ -1.22
RC3H1-204ENST00000479099 HIF1AQ16665 826 aa7.44□□□□□ -1.22
RC3H1-204ENST00000479099 PPP4R4Q6NUP7 873 aa7.44□□□□□ -1.22
RC3H1-204ENST00000479099 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.44□□□□□ -1.22
RC3H1-204ENST00000479099 JAMLQ86YT9 394 aa7.44□□□□□ -1.22
RC3H1-204ENST00000479099 ALDH16A1Q8IZ83 802 aa7.44□□□□□ -1.22
RC3H1-204ENST00000479099 CXorf38Q8TB03 319 aa7.44□□□□□ -1.22
RC3H1-204ENST00000479099 RUNDC1Q96C34 613 aa7.44□□□□□ -1.22
RC3H1-204ENST00000479099 C2orf49Q9BVC5 232 aaPredicted RBP7.44□□□□□ -1.22
RC3H1-204ENST00000479099 NIF3L1Q9GZT8 377 aa7.44□□□□□ -1.22
RC3H1-204ENST00000479099 ATAD2Q6PL18 1390 aa7.44□□□□□ -1.22
RC3H1-204ENST00000479099 KCNQ2O43526 872 aa7.43□□□□□ -1.22
RC3H1-204ENST00000479099 TTF1Q15361 905 aaPredicted RBP7.43□□□□□ -1.22
RC3H1-204ENST00000479099 TMEM95Q3KNT9 176 aa7.43□□□□□ -1.22
RC3H1-204ENST00000479099 ZNF280CQ8ND82 737 aa7.43□□□□□ -1.22
RC3H1-204ENST00000479099 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.43□□□□□ -1.22
RC3H1-204ENST00000479099 KCNH4Q9UQ05 1017 aa7.43□□□□□ -1.22
RC3H1-204ENST00000479099 FURINP09958 794 aa7.42□□□□□ -1.22
RC3H1-204ENST00000479099 EIF4BP23588 611 aaKnown RBP7.42□□□□□ -1.22
RC3H1-204ENST00000479099 CDC27P30260 824 aa7.42□□□□□ -1.22
RC3H1-204ENST00000479099 ICE2Q659A1 982 aa7.42□□□□□ -1.22
RC3H1-204ENST00000479099 ERMP1Q7Z2K6 904 aa7.42□□□□□ -1.22
RC3H1-204ENST00000479099 SCG3Q8WXD2 468 aaKnown RBP7.42□□□□□ -1.22
RC3H1-204ENST00000479099 DNAJC7Q99615 494 aa7.42□□□□□ -1.22
RC3H1-204ENST00000479099 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.42□□□□□ -1.22
RC3H1-204ENST00000479099 CCDC113Q9H0I3 377 aa7.42□□□□□ -1.22
RC3H1-204ENST00000479099 PRDM6Q9NQX0 595 aa7.42□□□□□ -1.22
RC3H1-204ENST00000479099 STRIP2Q9ULQ0 834 aa7.42□□□□□ -1.22
RC3H1-204ENST00000479099 MSRB2Q9Y3D2 182 aa7.42□□□□□ -1.22
RC3H1-204ENST00000479099 ALG1L2C9J202 215 aa7.41□□□□□ -1.22
RC3H1-204ENST00000479099 M0R082 166 aa7.41□□□□□ -1.22
RC3H1-204ENST00000479099 TBX3O15119 743 aa7.41□□□□□ -1.22
RC3H1-204ENST00000479099 POU3F3P20264 500 aaPredicted RBP7.41□□□□□ -1.22
RC3H1-204ENST00000479099 IGFBP4P22692 258 aa7.41□□□□□ -1.22
RC3H1-204ENST00000479099 PMLP29590 882 aa7.41□□□□□ -1.22
RC3H1-204ENST00000479099 ADH7P40394 386 aa7.41□□□□□ -1.22
RC3H1-204ENST00000479099 NASPP49321 788 aaPredicted RBP7.41□□□□□ -1.22
RC3H1-204ENST00000479099 CCDC174Q6PII3 467 aa7.41□□□□□ -1.22
RC3H1-204ENST00000479099 RAB44Q7Z6P3 723 aaPredicted RBP7.41□□□□□ -1.22
RC3H1-204ENST00000479099 PAF1Q8N7H5 531 aa7.41□□□□□ -1.22
RC3H1-204ENST00000479099 PDILTQ8N807 584 aa7.41□□□□□ -1.22
RC3H1-204ENST00000479099 C1orf131Q8NDD1 294 aaKnown RBP7.41□□□□□ -1.22
RC3H1-204ENST00000479099 ZNF417Q8TAU3 575 aa7.41□□□□□ -1.22
RC3H1-204ENST00000479099 HNRNPLLQ8WVV9 542 aaKnown RBP7.41□□□□□ -1.22
RC3H1-204ENST00000479099 ZNF587Q96SQ5 575 aaPredicted RBP7.41□□□□□ -1.22
RC3H1-204ENST00000479099 ZHX3Q9H4I2 956 aa7.41□□□□□ -1.22
RC3H1-204ENST00000479099 TPX2Q9ULW0 747 aaKnown RBP7.41□□□□□ -1.22
RC3H1-204ENST00000479099 SPG7Q9UQ90 795 aa7.41□□□□□ -1.22
RC3H1-204ENST00000479099 STARD13Q9Y3M8 1113 aa7.41□□□□□ -1.22
RC3H1-204ENST00000479099 TIMM44O43615 452 aa7.4□□□□□ -1.22
RC3H1-204ENST00000479099 FAM163BP0C2L3 166 aa7.4□□□□□ -1.22
RC3H1-204ENST00000479099 PDE6BP35913 854 aa7.4□□□□□ -1.22
RC3H1-204ENST00000479099 SQSTM1Q13501 440 aa7.4□□□□□ -1.22
RC3H1-204ENST00000479099 TKFCQ3LXA3 575 aa7.4□□□□□ -1.22
RC3H1-204ENST00000479099 PRRT3Q5FWE3 981 aa7.4□□□□□ -1.22
RC3H1-204ENST00000479099 C10orf62Q5T681 223 aaPredicted RBP7.4□□□□□ -1.22
RC3H1-204ENST00000479099 BTLAQ7Z6A9 289 aa7.4□□□□□ -1.22
RC3H1-204ENST00000479099 MICALL1Q8N3F8 863 aa7.4□□□□□ -1.22
RC3H1-204ENST00000479099 CHMP7Q8WUX9 453 aaPredicted RBP7.4□□□□□ -1.22
RC3H1-204ENST00000479099 EFCC1Q9HA90 598 aa7.4□□□□□ -1.22
RC3H1-204ENST00000479099 LZTS1Q9Y250 596 aa7.4□□□□□ -1.22
RC3H1-204ENST00000479099 MRVI1Q9Y6F6 885 aa7.4□□□□□ -1.22
RC3H1-204ENST00000479099 CCDC163A0A0D9SF12 145 aa7.39□□□□□ -1.23
RC3H1-204ENST00000479099 ALBP02768 609 aa7.39□□□□□ -1.23
RC3H1-204ENST00000479099 ST13P50502 369 aaKnown RBP7.39□□□□□ -1.23
RC3H1-204ENST00000479099 COL9A3Q14050 684 aaPredicted RBP7.39□□□□□ -1.23
RC3H1-204ENST00000479099 LRRC41Q15345 812 aa7.39□□□□□ -1.23
RC3H1-204ENST00000479099 TAF1CQ15572 869 aaPredicted RBP7.39□□□□□ -1.23
RC3H1-204ENST00000479099 INO80DQ53TQ3 878 aaPredicted RBP7.39□□□□□ -1.23
RC3H1-204ENST00000479099 IER5Q5VY09 327 aa7.39□□□□□ -1.23
RC3H1-204ENST00000479099 C16orf46Q6P387 395 aa7.39□□□□□ -1.23
RC3H1-204ENST00000479099 IFNL3Q8IZI9 196 aa7.39□□□□□ -1.23
RC3H1-204ENST00000479099 NGLY1Q96IV0 654 aa7.39□□□□□ -1.23
RC3H1-204ENST00000479099 ZNF69Q9UC07 566 aa7.39□□□□□ -1.23
RC3H1-204ENST00000479099 CCDC85CA6NKD9 419 aa7.38□□□□□ -1.23
RC3H1-204ENST00000479099 NPHP1O15259 732 aa7.38□□□□□ -1.23
RC3H1-204ENST00000479099 SCGB1D2O95969 90 aa7.38□□□□□ -1.23
RC3H1-204ENST00000479099 LDHCP07864 332 aa7.38□□□□□ -1.23
RC3H1-204ENST00000479099 ATF3P18847 181 aa7.38□□□□□ -1.23
RC3H1-204ENST00000479099 CNGA1P29973 690 aa7.38□□□□□ -1.23
RC3H1-204ENST00000479099 GATA4P43694 442 aa7.38□□□□□ -1.23
RC3H1-204ENST00000479099 RTN1Q16799 776 aa7.38□□□□□ -1.23
RC3H1-204ENST00000479099 GJD3Q8N144 294 aa7.38□□□□□ -1.23
RC3H1-204ENST00000479099 FBXO41Q8TF61 875 aa7.38□□□□□ -1.23
RC3H1-204ENST00000479099 BHMTQ93088 406 aa7.38□□□□□ -1.23
RC3H1-204ENST00000479099 CSRNP1Q96S65 589 aa7.38□□□□□ -1.23
RC3H1-204ENST00000479099 FAM126AQ9BYI3 521 aaPredicted RBP7.38□□□□□ -1.23
RC3H1-204ENST00000479099 SAP130Q9H0E3 1048 aa7.38□□□□□ -1.23
RC3H1-204ENST00000479099 INTUQ9ULD6 942 aa7.38□□□□□ -1.23
RC3H1-204ENST00000479099 SHTN1A0MZ66 631 aa7.37□□□□□ -1.23
RC3H1-204ENST00000479099 APBA3O96018 575 aa7.37□□□□□ -1.23
RC3H1-204ENST00000479099 MCL1Q07820 350 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms