RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-212ENST00000477520 OSBPL1AQ9BXW6 950 aa6.06□□□□□ -1.44
PTCD3-212ENST00000477520 OSGEPQ9NPF4 335 aa6.06□□□□□ -1.44
PTCD3-212ENST00000477520 ABI2Q9NYB9 513 aaPredicted RBP6.06□□□□□ -1.44
PTCD3-212ENST00000477520 CFDP1Q9UEE9 299 aaPredicted RBP6.06□□□□□ -1.44
PTCD3-212ENST00000477520 NCOA2Q15596 1464 aa6.06□□□□□ -1.44
PTCD3-212ENST00000477520 PHLDB1Q86UU1 1377 aa6.06□□□□□ -1.44
PTCD3-212ENST00000477520 MYO5CQ9NQX4 1742 aa6.05□□□□□ -1.44
PTCD3-212ENST00000477520 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.05□□□□□ -1.44
PTCD3-212ENST00000477520 ITSN2Q9NZM3 1697 aa6.05□□□□□ -1.44
PTCD3-212ENST00000477520 TEX14Q8IWB6 1497 aa6.05□□□□□ -1.44
PTCD3-212ENST00000477520 KIF13AQ9H1H9 1805 aa6.05□□□□□ -1.44
PTCD3-212ENST00000477520 MEGF11A6BM72 1044 aa6.05□□□□□ -1.44
PTCD3-212ENST00000477520 RXRBP28702 533 aa6.05□□□□□ -1.44
PTCD3-212ENST00000477520 VSIG10LQ86VR7 867 aa6.05□□□□□ -1.44
PTCD3-212ENST00000477520 NCAPG2Q86XI2 1143 aa6.05□□□□□ -1.44
PTCD3-212ENST00000477520 FAM200AQ8TCP9 573 aa6.05□□□□□ -1.44
PTCD3-212ENST00000477520 GPR152Q8TDT2 470 aa6.05□□□□□ -1.44
PTCD3-212ENST00000477520 SLC7A3Q8WY07 619 aa6.05□□□□□ -1.44
PTCD3-212ENST00000477520 FRAT1Q92837 279 aaPredicted RBP6.05□□□□□ -1.44
PTCD3-212ENST00000477520 WNT8BQ93098 351 aa6.05□□□□□ -1.44
PTCD3-212ENST00000477520 FBXL18Q96ME1 805 aa6.05□□□□□ -1.44
PTCD3-212ENST00000477520 BACH2Q9BYV9 841 aa6.05□□□□□ -1.44
PTCD3-212ENST00000477520 KANSL3Q9P2N6 904 aa6.05□□□□□ -1.44
PTCD3-212ENST00000477520 PLCH2O75038 1416 aa6.05□□□□□ -1.44
PTCD3-212ENST00000477520 ARAP3Q8WWN8 1544 aa6.04□□□□□ -1.44
PTCD3-212ENST00000477520 MAP3K4Q9Y6R4 1608 aa6.04□□□□□ -1.44
PTCD3-212ENST00000477520 NFKBIEO00221 500 aa6.04□□□□□ -1.44
PTCD3-212ENST00000477520 PRMT3O60678 531 aa6.04□□□□□ -1.44
PTCD3-212ENST00000477520 TRPA1O75762 1119 aa6.04□□□□□ -1.44
PTCD3-212ENST00000477520 ADMP35318 185 aa6.04□□□□□ -1.44
PTCD3-212ENST00000477520 ZAP70P43403 619 aa6.04□□□□□ -1.44
PTCD3-212ENST00000477520 OCLNQ16625 522 aa6.04□□□□□ -1.44
PTCD3-212ENST00000477520 GIMAP7Q8NHV1 300 aa6.04□□□□□ -1.44
PTCD3-212ENST00000477520 HHIPQ96QV1 700 aa6.04□□□□□ -1.44
PTCD3-212ENST00000477520 MYOM3Q5VTT5 1437 aa6.04□□□□□ -1.44
PTCD3-212ENST00000477520 MIA2Q96PC5 1412 aa6.04□□□□□ -1.44
PTCD3-212ENST00000477520 SETD5Q9C0A6 1442 aa6.04□□□□□ -1.44
PTCD3-212ENST00000477520 TTC37Q6PGP7 1564 aa6.04□□□□□ -1.44
PTCD3-212ENST00000477520 CFAP74Q9C0B2 1584 aa6.04□□□□□ -1.44
PTCD3-212ENST00000477520 ARHGAP5Q13017 1502 aa6.04□□□□□ -1.44
PTCD3-212ENST00000477520 GPATCH8Q9UKJ3 1502 aaKnown RBP6.04□□□□□ -1.44
PTCD3-212ENST00000477520 PLEKHH2Q8IVE3 1493 aa6.03□□□□□ -1.44
PTCD3-212ENST00000477520 NEO1Q92859 1461 aa6.03□□□□□ -1.44
PTCD3-212ENST00000477520 TSPOAP1O95153 1857 aa6.03□□□□□ -1.44
PTCD3-212ENST00000477520 ZBTB39O15060 712 aa6.03□□□□□ -1.44
PTCD3-212ENST00000477520 TIAF1O95411 115 aa6.03□□□□□ -1.44
PTCD3-212ENST00000477520 DLGAP3O95886 979 aa6.03□□□□□ -1.44
PTCD3-212ENST00000477520 JUNBP17275 347 aaPredicted RBP6.03□□□□□ -1.44
PTCD3-212ENST00000477520 CDCA8Q53HL2 280 aa6.03□□□□□ -1.44
PTCD3-212ENST00000477520 PROSER2Q86WR7 435 aaPredicted RBP6.03□□□□□ -1.44
PTCD3-212ENST00000477520 SMAP1Q8IYB5 467 aaPredicted RBP6.03□□□□□ -1.44
PTCD3-212ENST00000477520 C12orf50Q8NA57 414 aaPredicted RBP6.03□□□□□ -1.44
PTCD3-212ENST00000477520 CALR3Q96L12 384 aaKnown RBP6.03□□□□□ -1.44
PTCD3-212ENST00000477520 NAP1L5Q96NT1 182 aaPredicted RBP6.03□□□□□ -1.44
PTCD3-212ENST00000477520 KRTAP4-11Q9BYQ6 195 aa6.03□□□□□ -1.44
PTCD3-212ENST00000477520 TMEM63CQ9P1W3 806 aa6.03□□□□□ -1.44
PTCD3-212ENST00000477520 CNTN3Q9P232 1028 aa6.03□□□□□ -1.44
PTCD3-212ENST00000477520 ZNF777Q9ULD5 760 aaPredicted RBP6.03□□□□□ -1.44
PTCD3-212ENST00000477520 NUDCQ9Y266 331 aa6.03□□□□□ -1.44
PTCD3-212ENST00000477520 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.03□□□□□ -1.44
PTCD3-212ENST00000477520 PREX2Q70Z35 1606 aa6.03□□□□□ -1.44
PTCD3-212ENST00000477520 FANCAO15360 1455 aa6.02□□□□□ -1.44
PTCD3-212ENST00000477520 CDC42BPAQ5VT25 1732 aa6.02□□□□□ -1.45
PTCD3-212ENST00000477520 FAM177BA6PVY3 158 aa6.02□□□□□ -1.45
PTCD3-212ENST00000477520 PAPLNO95428 1278 aa6.02□□□□□ -1.45
PTCD3-212ENST00000477520 TNNT2P45379 298 aaPredicted RBP6.02□□□□□ -1.45
PTCD3-212ENST00000477520 CABP4P57796 275 aa6.02□□□□□ -1.45
PTCD3-212ENST00000477520 CPSF6Q16630 551 aaKnown RBP eCLIP6.02□□□□□ -1.45
PTCD3-212ENST00000477520 ZNF648Q5T619 568 aaPredicted RBP6.02□□□□□ -1.45
PTCD3-212ENST00000477520 TAF3Q5VWG9 929 aa6.02□□□□□ -1.45
PTCD3-212ENST00000477520 CDPF1Q6NVV7 123 aa6.02□□□□□ -1.45
PTCD3-212ENST00000477520 TMPRSS13Q9BYE2 586 aa6.02□□□□□ -1.45
PTCD3-212ENST00000477520 PAK6Q9NQU5 681 aaPredicted RBP6.02□□□□□ -1.45
PTCD3-212ENST00000477520 FAM13BQ9NYF5 915 aa6.02□□□□□ -1.45
PTCD3-212ENST00000477520 SALL4Q9UJQ4 1053 aa6.02□□□□□ -1.45
PTCD3-212ENST00000477520 SOX13Q9UN79 622 aa6.02□□□□□ -1.45
PTCD3-212ENST00000477520 FNDC3AQ9Y2H6 1198 aaKnown RBP6.02□□□□□ -1.45
PTCD3-212ENST00000477520 CDC42BPBQ9Y5S2 1711 aa6.02□□□□□ -1.45
PTCD3-212ENST00000477520 FGD6Q6ZV73 1430 aa6.01□□□□□ -1.45
PTCD3-212ENST00000477520 FAM95CA0A1B0GW59 222 aa6.01□□□□□ -1.45
PTCD3-212ENST00000477520 CYP26A1O43174 497 aa6.01□□□□□ -1.45
PTCD3-212ENST00000477520 DRD2P14416 443 aa6.01□□□□□ -1.45
PTCD3-212ENST00000477520 NAA30Q147X3 362 aaPredicted RBP6.01□□□□□ -1.45
PTCD3-212ENST00000477520 ZNF124Q15973 351 aa6.01□□□□□ -1.45
PTCD3-212ENST00000477520 UTP14CQ5TAP6 766 aaKnown RBP6.01□□□□□ -1.45
PTCD3-212ENST00000477520 SMG8Q8ND04 991 aaKnown RBP6.01□□□□□ -1.45
PTCD3-212ENST00000477520 FLCNQ8NFG4 579 aa6.01□□□□□ -1.45
PTCD3-212ENST00000477520 FBLIM1Q8WUP2 373 aa6.01□□□□□ -1.45
PTCD3-212ENST00000477520 ELP3Q9H9T3 547 aa6.01□□□□□ -1.45
PTCD3-212ENST00000477520 BSDC1Q9NW68 430 aaPredicted RBP6.01□□□□□ -1.45
PTCD3-212ENST00000477520 RAB3GAP2Q9H2M9 1393 aa6.01□□□□□ -1.45
PTCD3-212ENST00000477520 AKNAQ7Z591 1439 aa6□□□□□ -1.45
PTCD3-212ENST00000477520 KIAA1107Q9UPP5 1409 aa6□□□□□ -1.45
PTCD3-212ENST00000477520 FAM170BA6NMN3 283 aa6□□□□□ -1.45
PTCD3-212ENST00000477520 SOX1O00570 391 aaPredicted RBP6□□□□□ -1.45
PTCD3-212ENST00000477520 C19orf57Q0VDD7 668 aa6□□□□□ -1.45
PTCD3-212ENST00000477520 FAM50AQ14320 339 aaKnown RBP6□□□□□ -1.45
PTCD3-212ENST00000477520 CFAP70Q5T0N1 1121 aa6□□□□□ -1.45
PTCD3-212ENST00000477520 NUTM2GQ5VZR2 741 aa6□□□□□ -1.45
PTCD3-212ENST00000477520 SPOCD1Q6ZMY3 1216 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms