RNA–Protein interactions for RNA: ENST00000477087.1

CDKN1B-204, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

TSL 3

Gene CDKN1B, Length 453 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-204ENST00000477087 SPRED3Q2MJR0 410 aa8.59□□□□□ -1.03
CDKN1B-204ENST00000477087 ARTNQ5T4W7 220 aa8.59□□□□□ -1.03
CDKN1B-204ENST00000477087 DDX54Q8TDD1 881 aaKnown RBP8.59□□□□□ -1.03
CDKN1B-204ENST00000477087 CCDC74AQ96AQ1 378 aa8.59□□□□□ -1.03
CDKN1B-204ENST00000477087 KCNF1Q9H3M0 494 aa8.59□□□□□ -1.03
CDKN1B-204ENST00000477087 CYP4F12Q9HCS2 524 aa8.59□□□□□ -1.03
CDKN1B-204ENST00000477087 DCTN4Q9UJW0 460 aa8.59□□□□□ -1.03
CDKN1B-204ENST00000477087 RNF112Q9ULX5 631 aa8.59□□□□□ -1.03
CDKN1B-204ENST00000477087 CHD1O14646 1710 aa8.59□□□□□ -1.03
CDKN1B-204ENST00000477087 CFAP43Q8NDM7 1665 aa8.59□□□□□ -1.03
CDKN1B-204ENST00000477087 NCOA2Q15596 1464 aa8.58□□□□□ -1.04
CDKN1B-204ENST00000477087 MYOM3Q5VTT5 1437 aa8.58□□□□□ -1.04
CDKN1B-204ENST00000477087 LOC100289279A0A1B0GTE1 492 aa8.58□□□□□ -1.04
CDKN1B-204ENST00000477087 IGLV1-40P01703 118 aa8.58□□□□□ -1.04
CDKN1B-204ENST00000477087 PREPP48147 710 aa8.58□□□□□ -1.04
CDKN1B-204ENST00000477087 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.58□□□□□ -1.04
CDKN1B-204ENST00000477087 ALKBH8Q96BT7 664 aaKnown RBP8.58□□□□□ -1.04
CDKN1B-204ENST00000477087 CSRNP1Q96S65 589 aa8.58□□□□□ -1.04
CDKN1B-204ENST00000477087 HIF3AQ9Y2N7 669 aa8.58□□□□□ -1.04
CDKN1B-204ENST00000477087 CLSPNQ9HAW4 1339 aa8.57□□□□□ -1.04
CDKN1B-204ENST00000477087 FGD6Q6ZV73 1430 aa8.57□□□□□ -1.04
CDKN1B-204ENST00000477087 BMP3P12645 472 aa8.57□□□□□ -1.04
CDKN1B-204ENST00000477087 MAPK1P28482 360 aa8.57□□□□□ -1.04
CDKN1B-204ENST00000477087 FAM20CQ8IXL6 584 aa8.57□□□□□ -1.04
CDKN1B-204ENST00000477087 C12orf50Q8NA57 414 aaPredicted RBP8.57□□□□□ -1.04
CDKN1B-204ENST00000477087 KDM5BQ9UGL1 1544 aa8.57□□□□□ -1.04
CDKN1B-204ENST00000477087 ABCC2Q92887 1545 aa8.56□□□□□ -1.04
CDKN1B-204ENST00000477087 IGHA2P01877 340 aa8.56□□□□□ -1.04
CDKN1B-204ENST00000477087 ZNF423Q2M1K9 1284 aa8.56□□□□□ -1.04
CDKN1B-204ENST00000477087 EXOSC6Q5RKV6 272 aaKnown RBP8.56□□□□□ -1.04
CDKN1B-204ENST00000477087 HP1BP3Q5SSJ5 553 aaPredicted RBP8.56□□□□□ -1.04
CDKN1B-204ENST00000477087 NBPF11Q86T75 865 aa8.56□□□□□ -1.04
CDKN1B-204ENST00000477087 CLEC10AQ8IUN9 316 aa8.56□□□□□ -1.04
CDKN1B-204ENST00000477087 TMPRSS13Q9BYE2 586 aa8.56□□□□□ -1.04
CDKN1B-204ENST00000477087 C7orf69Q9H7B7 122 aa8.56□□□□□ -1.04
CDKN1B-204ENST00000477087 ZFYVE1Q9HBF4 777 aa8.56□□□□□ -1.04
CDKN1B-204ENST00000477087 TRAK1Q9UPV9 953 aa8.56□□□□□ -1.04
CDKN1B-204ENST00000477087 TCOF1Q13428 1488 aaKnown RBP8.56□□□□□ -1.04
CDKN1B-204ENST00000477087 CYP11A1P05108 521 aa8.55□□□□□ -1.04
CDKN1B-204ENST00000477087 BEND4Q6ZU67 534 aa8.55□□□□□ -1.04
CDKN1B-204ENST00000477087 TMC7Q7Z402 723 aa8.55□□□□□ -1.04
CDKN1B-204ENST00000477087 TRIM42Q8IWZ5 723 aa8.55□□□□□ -1.04
CDKN1B-204ENST00000477087 SMG8Q8ND04 991 aaKnown RBP8.55□□□□□ -1.04
CDKN1B-204ENST00000477087 ZNF576Q9H609 170 aa8.55□□□□□ -1.04
CDKN1B-204ENST00000477087 MAGI3Q5TCQ9 1506 aa8.54□□□□□ -1.04
CDKN1B-204ENST00000477087 HMX2A2RU54 273 aa8.54□□□□□ -1.04
CDKN1B-204ENST00000477087 ITPKAP23677 461 aa8.54□□□□□ -1.04
CDKN1B-204ENST00000477087 RXRBP28702 533 aa8.54□□□□□ -1.04
CDKN1B-204ENST00000477087 KCNA1Q09470 495 aa8.54□□□□□ -1.04
CDKN1B-204ENST00000477087 NFIAQ12857 509 aa8.54□□□□□ -1.04
CDKN1B-204ENST00000477087 POU4F3Q15319 338 aa8.54□□□□□ -1.04
CDKN1B-204ENST00000477087 FAM83CQ9BQN1 747 aa8.54□□□□□ -1.04
CDKN1B-204ENST00000477087 CORO1BQ9BR76 489 aa8.54□□□□□ -1.04
CDKN1B-204ENST00000477087 SUGCTQ9HAC7 445 aa8.54□□□□□ -1.04
CDKN1B-204ENST00000477087 NLRP2Q9NX02 1062 aa8.54□□□□□ -1.04
CDKN1B-204ENST00000477087 IVNS1ABPQ9Y6Y0 642 aa8.54□□□□□ -1.04
CDKN1B-204ENST00000477087 HYAL3O43820 417 aaPredicted RBP8.53□□□□□ -1.04
CDKN1B-204ENST00000477087 MAOBP27338 520 aa8.53□□□□□ -1.04
CDKN1B-204ENST00000477087 PTPN12Q05209 780 aaKnown RBP8.53□□□□□ -1.04
CDKN1B-204ENST00000477087 RNF43Q68DV7 783 aa8.53□□□□□ -1.04
CDKN1B-204ENST00000477087 PRPF40BQ6NWY9 871 aaKnown RBP8.53□□□□□ -1.04
CDKN1B-204ENST00000477087 DBNDD2Q9BQY9 259 aa8.53□□□□□ -1.04
CDKN1B-204ENST00000477087 PPP4R2Q9NY27 417 aa8.53□□□□□ -1.04
CDKN1B-204ENST00000477087 GPATCH8Q9UKJ3 1502 aaKnown RBP8.53□□□□□ -1.04
CDKN1B-204ENST00000477087 TTBK1Q5TCY1 1321 aaPredicted RBP8.53□□□□□ -1.04
CDKN1B-204ENST00000477087 ABCC10Q5T3U5 1492 aa8.52□□□□□ -1.05
CDKN1B-204ENST00000477087 TMEM238LA0A1B0GVL6 79 aa8.52□□□□□ -1.05
CDKN1B-204ENST00000477087 DLGAP3O95886 979 aa8.52□□□□□ -1.05
CDKN1B-204ENST00000477087 B3GALT4O96024 378 aa8.52□□□□□ -1.05
CDKN1B-204ENST00000477087 MAP4P27816 1152 aaKnown RBP8.52□□□□□ -1.05
CDKN1B-204ENST00000477087 USP11P51784 963 aa8.52□□□□□ -1.05
CDKN1B-204ENST00000477087 PLCB3Q01970 1234 aa8.52□□□□□ -1.05
CDKN1B-204ENST00000477087 ABCB6Q9NP58 842 aa8.52□□□□□ -1.05
CDKN1B-204ENST00000477087 CFDP1Q9UEE9 299 aaPredicted RBP8.52□□□□□ -1.05
CDKN1B-204ENST00000477087 CDK13Q14004 1512 aaKnown RBP8.52□□□□□ -1.05
CDKN1B-204ENST00000477087 SUPT6HQ7KZ85 1726 aaKnown RBP8.51□□□□□ -1.05
CDKN1B-204ENST00000477087 TIAF1O95411 115 aa8.51□□□□□ -1.05
CDKN1B-204ENST00000477087 GRM2Q14416 872 aa8.51□□□□□ -1.05
CDKN1B-204ENST00000477087 SGO2Q562F6 1265 aa8.51□□□□□ -1.05
CDKN1B-204ENST00000477087 EPS8L3Q8TE67 593 aaKnown RBP8.51□□□□□ -1.05
CDKN1B-204ENST00000477087 YIPF2Q9BWQ6 316 aa8.51□□□□□ -1.05
CDKN1B-204ENST00000477087 NRSN2Q9GZP1 204 aa8.51□□□□□ -1.05
CDKN1B-204ENST00000477087 RAD18Q9NS91 495 aa8.51□□□□□ -1.05
CDKN1B-204ENST00000477087 AKNAQ7Z591 1439 aa8.51□□□□□ -1.05
CDKN1B-204ENST00000477087 ERCC6L2Q5T890 1561 aa8.51□□□□□ -1.05
CDKN1B-204ENST00000477087 ROCK1Q13464 1354 aa8.5□□□□□ -1.05
CDKN1B-204ENST00000477087 PNMA6FA0A0J9YX94 578 aa8.5□□□□□ -1.05
CDKN1B-204ENST00000477087 SSTR4P31391 388 aa8.5□□□□□ -1.05
CDKN1B-204ENST00000477087 SOX4Q06945 474 aaPredicted RBP8.5□□□□□ -1.05
CDKN1B-204ENST00000477087 FAM50AQ14320 339 aaKnown RBP8.5□□□□□ -1.05
CDKN1B-204ENST00000477087 RPS26P11Q5JNZ5 115 aaPredicted RBP8.5□□□□□ -1.05
CDKN1B-204ENST00000477087 DTHD1Q6ZMT9 781 aa8.5□□□□□ -1.05
CDKN1B-204ENST00000477087 ZSCAN29Q8IWY8 852 aaPredicted RBP8.5□□□□□ -1.05
CDKN1B-204ENST00000477087 GIMAP7Q8NHV1 300 aa8.5□□□□□ -1.05
CDKN1B-204ENST00000477087 PCMTD2Q9NV79 361 aa8.5□□□□□ -1.05
CDKN1B-204ENST00000477087 SETD5Q9C0A6 1442 aa8.49□□□□□ -1.05
CDKN1B-204ENST00000477087 KIAA1107Q9UPP5 1409 aa8.49□□□□□ -1.05
CDKN1B-204ENST00000477087 PATL2C9JE40 543 aaKnown RBP8.49□□□□□ -1.05
CDKN1B-204ENST00000477087 DRD2P14416 443 aa8.49□□□□□ -1.05
CDKN1B-204ENST00000477087 GRIK1P39086 918 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms