RNA–Protein interactions for RNA: ENST00000475268.5

SEC61A2-213, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

TSL 1 (best)

Gene SEC61A2, Length 2,183 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-213ENST00000475268 MYH13Q9UKX3 1938 aa21.52■■□□□ 1.04
SEC61A2-213ENST00000475268 PRDX5P30044 214 aa21.51■■□□□ 1.03
SEC61A2-213ENST00000475268 ZSCAN23Q3MJ62 389 aa21.51■■□□□ 1.03
SEC61A2-213ENST00000475268 MFSD6Q6ZSS7 791 aa21.51■■□□□ 1.03
SEC61A2-213ENST00000475268 GAS2L3Q86XJ1 694 aa21.51■■□□□ 1.03
SEC61A2-213ENST00000475268 STK11IPQ8N1F8 1099 aa21.51■■□□□ 1.03
SEC61A2-213ENST00000475268 HPS5Q9UPZ3 1129 aa21.51■■□□□ 1.03
SEC61A2-213ENST00000475268 KIF3AQ9Y496 699 aa21.51■■□□□ 1.03
SEC61A2-213ENST00000475268 TACC3Q9Y6A5 838 aa21.51■■□□□ 1.03
SEC61A2-213ENST00000475268 SH2B2O14492 632 aaPredicted RBP21.5■■□□□ 1.03
SEC61A2-213ENST00000475268 KDM4AO75164 1064 aa21.5■■□□□ 1.03
SEC61A2-213ENST00000475268 TPRNQ4KMQ1 711 aa21.5■■□□□ 1.03
SEC61A2-213ENST00000475268 FAM173BQ6P4H8 233 aa21.5■■□□□ 1.03
SEC61A2-213ENST00000475268 NLGN1Q8N2Q7 840 aa21.5■■□□□ 1.03
SEC61A2-213ENST00000475268 CNNM2Q9H8M5 875 aa21.5■■□□□ 1.03
SEC61A2-213ENST00000475268 TOMM22Q9NS69 142 aa21.5■■□□□ 1.03
SEC61A2-213ENST00000475268 BBOX1O75936 387 aa21.5■■□□□ 1.03
SEC61A2-213ENST00000475268 FOSBP53539 338 aa21.5■■□□□ 1.03
SEC61A2-213ENST00000475268 TMEM87BQ96K49 555 aa21.5■■□□□ 1.03
SEC61A2-213ENST00000475268 KRT23Q9C075 422 aa21.5■■□□□ 1.03
SEC61A2-213ENST00000475268 TMEM63CQ9P1W3 806 aa21.5■■□□□ 1.03
SEC61A2-213ENST00000475268 ZSWIM5Q9P217 1185 aa21.5■■□□□ 1.03
SEC61A2-213ENST00000475268 ISY1Q9ULR0 285 aaKnown RBP21.5■■□□□ 1.03
SEC61A2-213ENST00000475268 SALL1Q9NSC2 1324 aa21.49■■□□□ 1.03
SEC61A2-213ENST00000475268 MINDY4BA8MYZ0 360 aa21.49■■□□□ 1.03
SEC61A2-213ENST00000475268 DHX16O60231 1041 aaKnown RBP21.49■■□□□ 1.03
SEC61A2-213ENST00000475268 UFL1O94874 794 aa21.49■■□□□ 1.03
SEC61A2-213ENST00000475268 HOXA10P31260 410 aaPredicted RBP21.49■■□□□ 1.03
SEC61A2-213ENST00000475268 RRP12Q5JTH9 1297 aaKnown RBP21.49■■□□□ 1.03
SEC61A2-213ENST00000475268 ZNF804AQ7Z570 1209 aa21.49■■□□□ 1.03
SEC61A2-213ENST00000475268 STAG1Q8WVM7 1258 aa21.49■■□□□ 1.03
SEC61A2-213ENST00000475268 PPARAQ07869 468 aa21.48■■□□□ 1.03
SEC61A2-213ENST00000475268 CSPP1Q1MSJ5 1256 aa21.48■■□□□ 1.03
SEC61A2-213ENST00000475268 XRCC6P12956 609 aaKnown RBP eCLIP21.48■■□□□ 1.03
SEC61A2-213ENST00000475268 KRT85P78386 507 aa21.48■■□□□ 1.03
SEC61A2-213ENST00000475268 TMEM67Q5HYA8 995 aa21.48■■□□□ 1.03
SEC61A2-213ENST00000475268 IGDCC4Q8TDY8 1250 aa21.48■■□□□ 1.03
SEC61A2-213ENST00000475268 TIAM2Q8IVF5 1701 aa21.47■■□□□ 1.03
SEC61A2-213ENST00000475268 KLRG2A4D1S0 409 aaPredicted RBP21.47■■□□□ 1.03
SEC61A2-213ENST00000475268 MRE11P49959 708 aa21.47■■□□□ 1.03
SEC61A2-213ENST00000475268 SPTY2D1Q68D10 685 aaPredicted RBP21.47■■□□□ 1.03
SEC61A2-213ENST00000475268 TDRD7Q8NHU6 1098 aaKnown RBP21.47■■□□□ 1.03
SEC61A2-213ENST00000475268 CRAMP1Q96RY5 1269 aa21.47■■□□□ 1.03
SEC61A2-213ENST00000475268 GRPEL1Q9HAV7 217 aa21.47■■□□□ 1.03
SEC61A2-213ENST00000475268 SENP2Q9HC62 589 aa21.47■■□□□ 1.03
SEC61A2-213ENST00000475268 AATFQ9NY61 560 aaKnown RBP eCLIP21.47■■□□□ 1.03
SEC61A2-213ENST00000475268 GGA1Q9UJY5 639 aa21.47■■□□□ 1.03
SEC61A2-213ENST00000475268 CPLX1O14810 134 aa21.47■■□□□ 1.03
SEC61A2-213ENST00000475268 ATP2B4P23634 1241 aa21.47■■□□□ 1.03
SEC61A2-213ENST00000475268 ZNF445P59923 1031 aa21.47■■□□□ 1.03
SEC61A2-213ENST00000475268 NFXL1Q6ZNB6 911 aa21.47■■□□□ 1.03
SEC61A2-213ENST00000475268 DZIP1Q86YF9 867 aaKnown RBP21.47■■□□□ 1.03
SEC61A2-213ENST00000475268 WDR66Q8TBY9 1149 aa21.47■■□□□ 1.03
SEC61A2-213ENST00000475268 RNF41Q9H4P4 317 aaPredicted RBP21.47■■□□□ 1.03
SEC61A2-213ENST00000475268 CHD4Q14839 1912 aa21.46■■□□□ 1.03
SEC61A2-213ENST00000475268 IFIT3O14879 490 aaKnown RBP21.46■■□□□ 1.03
SEC61A2-213ENST00000475268 ZBTB22O15209 634 aa21.46■■□□□ 1.03
SEC61A2-213ENST00000475268 UBE2HP62256 183 aa21.46■■□□□ 1.03
SEC61A2-213ENST00000475268 C15orf52Q6ZUT6 534 aaKnown RBP21.46■■□□□ 1.03
SEC61A2-213ENST00000475268 FLAD1Q8NFF5 587 aa21.46■■□□□ 1.03
SEC61A2-213ENST00000475268 LY9Q9HBG7 655 aa21.46■■□□□ 1.03
SEC61A2-213ENST00000475268 FDPSP14324 419 aaKnown RBP21.46■■□□□ 1.03
SEC61A2-213ENST00000475268 RESTQ13127 1097 aa21.46■■□□□ 1.03
SEC61A2-213ENST00000475268 BRIP1Q9BX63 1249 aa21.46■■□□□ 1.03
SEC61A2-213ENST00000475268 RXRAP19793 462 aa21.45■■□□□ 1.02
SEC61A2-213ENST00000475268 METAP2P50579 478 aaKnown RBP eCLIP21.45■■□□□ 1.02
SEC61A2-213ENST00000475268 APOA5Q6Q788 366 aa21.45■■□□□ 1.02
SEC61A2-213ENST00000475268 LDHBP07195 334 aaKnown RBP21.44■■□□□ 1.02
SEC61A2-213ENST00000475268 ZSCAN16Q9H4T2 348 aaPredicted RBP21.44■■□□□ 1.02
SEC61A2-213ENST00000475268 ANAPC4Q9UJX5 808 aa21.44■■□□□ 1.02
SEC61A2-213ENST00000475268 CYP2D7A0A087X1C5 515 aa21.44■■□□□ 1.02
SEC61A2-213ENST00000475268 SMIM22K7EJ46 135 aa21.44■■□□□ 1.02
SEC61A2-213ENST00000475268 MICU3Q86XE3 530 aa21.44■■□□□ 1.02
SEC61A2-213ENST00000475268 SYAP1Q96A49 352 aaPredicted RBP21.44■■□□□ 1.02
SEC61A2-213ENST00000475268 ZKSCAN3Q9BRR0 538 aa21.44■■□□□ 1.02
SEC61A2-213ENST00000475268 CRNKL1Q9BZJ0 848 aaKnown RBP21.44■■□□□ 1.02
SEC61A2-213ENST00000475268 TFIP11Q9UBB9 837 aaKnown RBP21.44■■□□□ 1.02
SEC61A2-213ENST00000475268 SYCE3A1L190 88 aa21.43■■□□□ 1.02
SEC61A2-213ENST00000475268 PPEF1O14829 653 aaPredicted RBP21.43■■□□□ 1.02
SEC61A2-213ENST00000475268 MMP10P09238 476 aa21.43■■□□□ 1.02
SEC61A2-213ENST00000475268 GUCY1B3Q02153 619 aa21.43■■□□□ 1.02
SEC61A2-213ENST00000475268 SGMS1Q86VZ5 419 aa21.43■■□□□ 1.02
SEC61A2-213ENST00000475268 CD209Q9NNX6 404 aa21.43■■□□□ 1.02
SEC61A2-213ENST00000475268 ZBTB43O43298 467 aa21.43■■□□□ 1.02
SEC61A2-213ENST00000475268 LIFRP42702 1097 aa21.43■■□□□ 1.02
SEC61A2-213ENST00000475268 SART3Q15020 963 aaKnown RBP21.43■■□□□ 1.02
SEC61A2-213ENST00000475268 MSL1Q68DK7 614 aa21.43■■□□□ 1.02
SEC61A2-213ENST00000475268 GIMAP6Q6P9H5 292 aa21.43■■□□□ 1.02
SEC61A2-213ENST00000475268 TMED8Q6PL24 325 aaPredicted RBP21.43■■□□□ 1.02
SEC61A2-213ENST00000475268 TTC6Q86TZ1 520 aa21.43■■□□□ 1.02
SEC61A2-213ENST00000475268 CCDC144CPQ8IYA2 1237 aa21.43■■□□□ 1.02
SEC61A2-213ENST00000475268 TBC1D16Q8TBP0 767 aa21.43■■□□□ 1.02
SEC61A2-213ENST00000475268 PODXL2Q9NZ53 605 aa21.43■■□□□ 1.02
SEC61A2-213ENST00000475268 ORC3Q9UBD5 711 aaPredicted RBP21.43■■□□□ 1.02
SEC61A2-213ENST00000475268 POLLQ9UGP5 575 aa21.43■■□□□ 1.02
SEC61A2-213ENST00000475268 CCDC69A6NI79 296 aa21.42■■□□□ 1.02
SEC61A2-213ENST00000475268 C6orf229H3BNL8 230 aa21.42■■□□□ 1.02
SEC61A2-213ENST00000475268 ADD1P35611 737 aaKnown RBP21.42■■□□□ 1.02
SEC61A2-213ENST00000475268 MYL10Q9BUA6 226 aa21.42■■□□□ 1.02
SEC61A2-213ENST00000475268 SLC12A7Q9Y666 1083 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms