RNA–Protein interactions for RNA: ENST00000474766.1

SH3D21-202, Transcript of SH3 domain containing 21, humanhuman

TSL 1 (best)

Gene SH3D21, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-202ENST00000474766 TPD52L1Q16890 204 aaPredicted RBP24.68■■□□□ 1.54
SH3D21-202ENST00000474766 ERFEQ4G0M1 354 aa24.68■■□□□ 1.54
SH3D21-202ENST00000474766 KRT222Q8N1A0 295 aa24.68■■□□□ 1.54
SH3D21-202ENST00000474766 BRIP1Q9BX63 1249 aa24.68■■□□□ 1.54
SH3D21-202ENST00000474766 NYXQ9GZU5 481 aa24.68■■□□□ 1.54
SH3D21-202ENST00000474766 FAM53CQ9NYF3 392 aa24.68■■□□□ 1.54
SH3D21-202ENST00000474766 CSF1RP07333 972 aa24.68■■□□□ 1.54
SH3D21-202ENST00000474766 SLFNL1Q499Z3 407 aa24.68■■□□□ 1.54
SH3D21-202ENST00000474766 SARM1Q6SZW1 724 aa24.68■■□□□ 1.54
SH3D21-202ENST00000474766 FERMT3Q86UX7 667 aa24.68■■□□□ 1.54
SH3D21-202ENST00000474766 UTP14AQ9BVJ6 771 aaKnown RBP24.68■■□□□ 1.54
SH3D21-202ENST00000474766 CEP135Q66GS9 1140 aa24.67■■□□□ 1.54
SH3D21-202ENST00000474766 DHX32Q7L7V1 743 aaKnown RBP24.67■■□□□ 1.54
SH3D21-202ENST00000474766 FAM89AQ96GI7 184 aa24.67■■□□□ 1.54
SH3D21-202ENST00000474766 TRMT112Q9UI30 125 aaKnown RBP24.67■■□□□ 1.54
SH3D21-202ENST00000474766 LAMA4Q16363 1823 aa24.66■■□□□ 1.54
SH3D21-202ENST00000474766 CCDC66A2RUB6 948 aa24.66■■□□□ 1.54
SH3D21-202ENST00000474766 HSPD1P10809 573 aaKnown RBP24.66■■□□□ 1.54
SH3D21-202ENST00000474766 ZBTB38Q8NAP3 1195 aaPredicted RBP24.66■■□□□ 1.54
SH3D21-202ENST00000474766 AGXT2Q9BYV1 514 aa24.66■■□□□ 1.54
SH3D21-202ENST00000474766 DACT1Q9NYF0 836 aa24.66■■□□□ 1.54
SH3D21-202ENST00000474766 AKAP2Q9Y2D5 859 aa24.66■■□□□ 1.54
SH3D21-202ENST00000474766 MAST3O60307 1309 aa24.66■■□□□ 1.54
SH3D21-202ENST00000474766 GOLGA6L4A6NEF3 574 aa24.66■■□□□ 1.54
SH3D21-202ENST00000474766 EXOSC10Q01780 885 aaKnown RBP24.66■■□□□ 1.54
SH3D21-202ENST00000474766 CLIP2Q9UDT6 1046 aa24.66■■□□□ 1.54
SH3D21-202ENST00000474766 JAK2O60674 1132 aa24.65■■□□□ 1.54
SH3D21-202ENST00000474766 PFKFB2O60825 505 aa24.65■■□□□ 1.54
SH3D21-202ENST00000474766 GTF2E1P29083 439 aaPredicted RBP24.65■■□□□ 1.54
SH3D21-202ENST00000474766 TERF2Q15554 542 aa24.65■■□□□ 1.54
SH3D21-202ENST00000474766 CACTINQ8WUQ7 758 aaKnown RBP24.65■■□□□ 1.54
SH3D21-202ENST00000474766 BRF1Q92994 677 aa24.65■■□□□ 1.54
SH3D21-202ENST00000474766 LLPHQ9BRT6 129 aaKnown RBP24.65■■□□□ 1.54
SH3D21-202ENST00000474766 KCND1Q9NSA2 647 aa24.65■■□□□ 1.54
SH3D21-202ENST00000474766 NRBP1Q9UHY1 535 aa24.65■■□□□ 1.54
SH3D21-202ENST00000474766 SMARCC2Q8TAQ2 1214 aa24.64■■□□□ 1.54
SH3D21-202ENST00000474766 DDX60Q8IY21 1712 aaKnown RBP24.64■■□□□ 1.54
SH3D21-202ENST00000474766 LAMB2P55268 1798 aa24.64■■□□□ 1.53
SH3D21-202ENST00000474766 ZNF165P49910 485 aa24.64■■□□□ 1.53
SH3D21-202ENST00000474766 CAMK4Q16566 473 aa24.64■■□□□ 1.53
SH3D21-202ENST00000474766 FAM173BQ6P4H8 233 aa24.64■■□□□ 1.53
SH3D21-202ENST00000474766 MRFAP1L1Q96HT8 127 aa24.64■■□□□ 1.53
SH3D21-202ENST00000474766 PDE6BP35913 854 aa24.63■■□□□ 1.53
SH3D21-202ENST00000474766 SCRN1Q12765 414 aa24.63■■□□□ 1.53
SH3D21-202ENST00000474766 CCDC158Q5M9N0 1113 aa24.63■■□□□ 1.53
SH3D21-202ENST00000474766 C2CD5Q86YS7 1000 aa24.63■■□□□ 1.53
SH3D21-202ENST00000474766 XAGE2Q96GT9 111 aa24.63■■□□□ 1.53
SH3D21-202ENST00000474766 CDHR2Q9BYE9 1310 aa24.63■■□□□ 1.53
SH3D21-202ENST00000474766 NYAP1Q6ZVC0 841 aa24.62■■□□□ 1.53
SH3D21-202ENST00000474766 ERO1AQ96HE7 468 aa24.62■■□□□ 1.53
SH3D21-202ENST00000474766 SPATA32Q96LK8 384 aa24.62■■□□□ 1.53
SH3D21-202ENST00000474766 RIC1Q4ADV7 1423 aa24.62■■□□□ 1.53
SH3D21-202ENST00000474766 IGSF3O75054 1194 aa24.62■■□□□ 1.53
SH3D21-202ENST00000474766 HSP90B1P14625 803 aaKnown RBP24.62■■□□□ 1.53
SH3D21-202ENST00000474766 YBX3P16989 372 aaKnown RBP eCLIP24.62■■□□□ 1.53
SH3D21-202ENST00000474766 CACNA1SQ13698 1873 aa24.62■■□□□ 1.53
SH3D21-202ENST00000474766 LRRFIP1Q32MZ4 808 aaKnown RBP24.62■■□□□ 1.53
SH3D21-202ENST00000474766 CKAP2LQ8IYA6 745 aa24.62■■□□□ 1.53
SH3D21-202ENST00000474766 E7EWF7 191 aa24.61■■□□□ 1.53
SH3D21-202ENST00000474766 KIF2AO00139 706 aaPredicted RBP24.61■■□□□ 1.53
SH3D21-202ENST00000474766 ADORA1P30542 326 aa24.61■■□□□ 1.53
SH3D21-202ENST00000474766 LRRC8AQ8IWT6 810 aa24.61■■□□□ 1.53
SH3D21-202ENST00000474766 LEO1Q8WVC0 666 aaPredicted RBP24.61■■□□□ 1.53
SH3D21-202ENST00000474766 LRRC2Q9BYS8 371 aa24.61■■□□□ 1.53
SH3D21-202ENST00000474766 KLRG2A4D1S0 409 aaPredicted RBP24.61■■□□□ 1.53
SH3D21-202ENST00000474766 M0R2C6 588 aa24.61■■□□□ 1.53
SH3D21-202ENST00000474766 RESTQ13127 1097 aa24.61■■□□□ 1.53
SH3D21-202ENST00000474766 IFIT5Q13325 482 aaKnown RBP24.61■■□□□ 1.53
SH3D21-202ENST00000474766 C3orf67Q6ZVT6 689 aa24.61■■□□□ 1.53
SH3D21-202ENST00000474766 OSBP2Q969R2 916 aa24.61■■□□□ 1.53
SH3D21-202ENST00000474766 H0YIN7 160 aa24.6■■□□□ 1.53
SH3D21-202ENST00000474766 ZFYP08048 801 aaPredicted RBP24.6■■□□□ 1.53
SH3D21-202ENST00000474766 TTC39AQ5SRH9 613 aa24.6■■□□□ 1.53
SH3D21-202ENST00000474766 SLC10A5Q5PT55 438 aa24.59■■□□□ 1.53
SH3D21-202ENST00000474766 FBXL16Q8N461 479 aa24.59■■□□□ 1.53
SH3D21-202ENST00000474766 ARFGEF1Q9Y6D6 1849 aa24.59■■□□□ 1.53
SH3D21-202ENST00000474766 SRGNP10124 158 aa24.59■■□□□ 1.53
SH3D21-202ENST00000474766 FKBP4Q02790 459 aaKnown RBP eCLIP24.59■■□□□ 1.538e-7■■■□□ 17.7
SH3D21-202ENST00000474766 PTPN14Q15678 1187 aa24.59■■□□□ 1.53
SH3D21-202ENST00000474766 GORABQ5T7V8 394 aa24.59■■□□□ 1.53
SH3D21-202ENST00000474766 NSUN7Q8NE18 718 aaKnown RBP24.59■■□□□ 1.53
SH3D21-202ENST00000474766 ZSCAN16Q9H4T2 348 aaPredicted RBP24.59■■□□□ 1.53
SH3D21-202ENST00000474766 IRS4O14654 1257 aaPredicted RBP24.58■■□□□ 1.53
SH3D21-202ENST00000474766 GPR162Q16538 588 aa24.58■■□□□ 1.53
SH3D21-202ENST00000474766 CCDC144BQ3MJ40 725 aa24.58■■□□□ 1.53
SH3D21-202ENST00000474766 KMT5BQ4FZB7 885 aa24.58■■□□□ 1.53
SH3D21-202ENST00000474766 CCDC144CPQ8IYA2 1237 aa24.58■■□□□ 1.53
SH3D21-202ENST00000474766 PIM2Q9P1W9 311 aa24.58■■□□□ 1.53
SH3D21-202ENST00000474766 RIPOR2Q9Y4F9 1068 aa24.58■■□□□ 1.53
SH3D21-202ENST00000474766 TFIP11Q9UBB9 837 aaKnown RBP24.57■■□□□ 1.52
SH3D21-202ENST00000474766 CTAGE5O15320 804 aa24.57■■□□□ 1.52
SH3D21-202ENST00000474766 FOXP2O15409 715 aa24.57■■□□□ 1.52
SH3D21-202ENST00000474766 CTDNEP1O95476 244 aa24.57■■□□□ 1.52
SH3D21-202ENST00000474766 NAA30Q147X3 362 aaPredicted RBP24.57■■□□□ 1.52
SH3D21-202ENST00000474766 CRY2Q49AN0 593 aa24.57■■□□□ 1.52
SH3D21-202ENST00000474766 TTLL11Q8NHH1 800 aa24.57■■□□□ 1.52
SH3D21-202ENST00000474766 GOLGA6L19H0YKK7 550 aa24.56■■□□□ 1.52
SH3D21-202ENST00000474766 APOBRQ0VD83 1088 aa24.56■■□□□ 1.52
SH3D21-202ENST00000474766 SCARF1Q14162 830 aa24.56■■□□□ 1.52
SH3D21-202ENST00000474766 IQCB1Q15051 598 aa24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms