RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 TRPA1O75762 1119 aa5.79□□□□□ -1.48
ECHDC1-213ENST00000474240 DLGAP3O95886 979 aa5.79□□□□□ -1.48
ECHDC1-213ENST00000474240 IGHA2P01877 340 aa5.79□□□□□ -1.48
ECHDC1-213ENST00000474240 FMR1Q06787 632 aaKnown RBP eCLIP5.79□□□□□ -1.48
ECHDC1-213ENST00000474240 DSC3Q14574 896 aa5.79□□□□□ -1.48
ECHDC1-213ENST00000474240 ALG1LQ6GMV1 187 aa5.79□□□□□ -1.48
ECHDC1-213ENST00000474240 SPRED2Q7Z698 418 aa5.79□□□□□ -1.48
ECHDC1-213ENST00000474240 RC3H2Q9HBD1 1191 aaKnown RBP5.79□□□□□ -1.48
ECHDC1-213ENST00000474240 SOX13Q9UN79 622 aa5.79□□□□□ -1.48
ECHDC1-213ENST00000474240 DUSP27Q5VZP5 1158 aa5.78□□□□□ -1.48
ECHDC1-213ENST00000474240 LILRA6Q6PI73 481 aa5.78□□□□□ -1.48
ECHDC1-213ENST00000474240 GALNT12Q8IXK2 581 aa5.78□□□□□ -1.48
ECHDC1-213ENST00000474240 C1orf127Q8N9H9 656 aa5.78□□□□□ -1.48
ECHDC1-213ENST00000474240 FRMD6Q96NE9 622 aa5.78□□□□□ -1.48
ECHDC1-213ENST00000474240 CSRNP1Q96S65 589 aa5.78□□□□□ -1.48
ECHDC1-213ENST00000474240 YIPF2Q9BWQ6 316 aa5.78□□□□□ -1.48
ECHDC1-213ENST00000474240 CHRDQ9H2X0 955 aa5.78□□□□□ -1.48
ECHDC1-213ENST00000474240 SALL4Q9UJQ4 1053 aa5.78□□□□□ -1.48
ECHDC1-213ENST00000474240 A6NHS1 94 aa5.77□□□□□ -1.49
ECHDC1-213ENST00000474240 NFKBIEO00221 500 aa5.77□□□□□ -1.49
ECHDC1-213ENST00000474240 PDE2AO00408 941 aaPredicted RBP5.77□□□□□ -1.49
ECHDC1-213ENST00000474240 EIF1AYO14602 144 aaKnown RBP5.77□□□□□ -1.49
ECHDC1-213ENST00000474240 PRRG2O14669 202 aa5.77□□□□□ -1.49
ECHDC1-213ENST00000474240 RAB6AP20340 208 aa5.77□□□□□ -1.49
ECHDC1-213ENST00000474240 ENOX2Q16206 610 aaKnown RBP5.77□□□□□ -1.49
ECHDC1-213ENST00000474240 KRTAP19-4Q3LI73 84 aa5.77□□□□□ -1.49
ECHDC1-213ENST00000474240 ATG4DQ86TL0 474 aaPredicted RBP5.77□□□□□ -1.49
ECHDC1-213ENST00000474240 GLIS3Q8NEA6 775 aa5.77□□□□□ -1.49
ECHDC1-213ENST00000474240 EZH1Q92800 747 aaPredicted RBP5.77□□□□□ -1.49
ECHDC1-213ENST00000474240 NIF3L1Q9GZT8 377 aa5.77□□□□□ -1.49
ECHDC1-213ENST00000474240 CNTN3Q9P232 1028 aa5.77□□□□□ -1.49
ECHDC1-213ENST00000474240 FOXD3Q9UJU5 478 aaPredicted RBP5.77□□□□□ -1.49
ECHDC1-213ENST00000474240 TRAK1Q9UPV9 953 aa5.77□□□□□ -1.49
ECHDC1-213ENST00000474240 CCDC9Q9Y3X0 531 aaKnown RBP5.77□□□□□ -1.49
ECHDC1-213ENST00000474240 ANKRD33BA6NCL7 494 aa5.76□□□□□ -1.49
ECHDC1-213ENST00000474240 B8ZZF3 427 aa5.76□□□□□ -1.49
ECHDC1-213ENST00000474240 GIPC1O14908 333 aa5.76□□□□□ -1.49
ECHDC1-213ENST00000474240 EREGO14944 169 aa5.76□□□□□ -1.49
ECHDC1-213ENST00000474240 BUD31P41223 144 aaPredicted RBP5.76□□□□□ -1.49
ECHDC1-213ENST00000474240 TRIM26Q12899 539 aaPredicted RBP5.76□□□□□ -1.49
ECHDC1-213ENST00000474240 DNAJC14Q6Y2X3 702 aaPredicted RBP5.76□□□□□ -1.49
ECHDC1-213ENST00000474240 CILP2Q8IUL8 1156 aa5.76□□□□□ -1.49
ECHDC1-213ENST00000474240 KRTAP9-3Q9BYQ3 159 aa5.76□□□□□ -1.49
ECHDC1-213ENST00000474240 SRCIN1Q9C0H9 1055 aa5.76□□□□□ -1.49
ECHDC1-213ENST00000474240 ZFYVE1Q9HBF4 777 aa5.76□□□□□ -1.49
ECHDC1-213ENST00000474240 DZANK1Q9NVP4 752 aa5.76□□□□□ -1.49
ECHDC1-213ENST00000474240 NLRP2Q9NX02 1062 aa5.76□□□□□ -1.49
ECHDC1-213ENST00000474240 PPP4R2Q9NY27 417 aa5.76□□□□□ -1.49
ECHDC1-213ENST00000474240 PNMA6FA0A0J9YX94 578 aa5.75□□□□□ -1.49
ECHDC1-213ENST00000474240 SOX1O00570 391 aaPredicted RBP5.75□□□□□ -1.49
ECHDC1-213ENST00000474240 MFAP1P55081 439 aaKnown RBP5.75□□□□□ -1.49
ECHDC1-213ENST00000474240 CYP27A1Q02318 531 aa5.75□□□□□ -1.49
ECHDC1-213ENST00000474240 MESP2Q0VG99 397 aa5.75□□□□□ -1.49
ECHDC1-213ENST00000474240 BNIP3Q12983 259 aa5.75□□□□□ -1.49
ECHDC1-213ENST00000474240 ORC1Q13415 861 aa5.75□□□□□ -1.49
ECHDC1-213ENST00000474240 IKBKEQ14164 716 aa5.75□□□□□ -1.49
ECHDC1-213ENST00000474240 EAPPQ56P03 285 aaPredicted RBP5.75□□□□□ -1.49
ECHDC1-213ENST00000474240 STK11IPQ8N1F8 1099 aa5.75□□□□□ -1.49
ECHDC1-213ENST00000474240 TMEM102Q8N9M5 508 aaPredicted RBP5.75□□□□□ -1.49
ECHDC1-213ENST00000474240 TMEM40Q8WWA1 233 aa5.75□□□□□ -1.49
ECHDC1-213ENST00000474240 ADAMTS6Q9UKP5 1117 aa5.75□□□□□ -1.49
ECHDC1-213ENST00000474240 ACTL7BQ9Y614 415 aa5.75□□□□□ -1.49
ECHDC1-213ENST00000474240 RNASE1P07998 156 aaKnown RBP5.74□□□□□ -1.49
ECHDC1-213ENST00000474240 NFICP08651 508 aa5.74□□□□□ -1.49
ECHDC1-213ENST00000474240 ADH5P11766 374 aa5.74□□□□□ -1.49
ECHDC1-213ENST00000474240 FUT4P22083 530 aa5.74□□□□□ -1.49
ECHDC1-213ENST00000474240 MAPK8P45983 427 aa5.74□□□□□ -1.49
ECHDC1-213ENST00000474240 SOX4Q06945 474 aaPredicted RBP5.74□□□□□ -1.49
ECHDC1-213ENST00000474240 KIAA0319Q5VV43 1072 aa5.74□□□□□ -1.49
ECHDC1-213ENST00000474240 LCNL1Q6ZST4 164 aa5.74□□□□□ -1.49
ECHDC1-213ENST00000474240 LRRN4CLQ8ND94 238 aa5.74□□□□□ -1.49
ECHDC1-213ENST00000474240 CCDC74AQ96AQ1 378 aa5.74□□□□□ -1.49
ECHDC1-213ENST00000474240 FAM84AQ96KN4 292 aa5.74□□□□□ -1.49
ECHDC1-213ENST00000474240 MBNL3Q9NUK0 354 aaKnown RBP5.74□□□□□ -1.49
ECHDC1-213ENST00000474240 SPG7Q9UQ90 795 aa5.74□□□□□ -1.49
ECHDC1-213ENST00000474240 PRPF40AO75400 957 aaKnown RBP5.73□□□□□ -1.49
ECHDC1-213ENST00000474240 XRCC5P13010 732 aaKnown RBP5.73□□□□□ -1.49
ECHDC1-213ENST00000474240 CFPP27918 469 aa5.73□□□□□ -1.49
ECHDC1-213ENST00000474240 MAP7Q14244 749 aa5.73□□□□□ -1.49
ECHDC1-213ENST00000474240 EXOSC6Q5RKV6 272 aaKnown RBP5.73□□□□□ -1.49
ECHDC1-213ENST00000474240 KRTAP5-3Q6L8H2 238 aa5.73□□□□□ -1.49
ECHDC1-213ENST00000474240 PRPF40BQ6NWY9 871 aaKnown RBP5.73□□□□□ -1.49
ECHDC1-213ENST00000474240 VN1R5Q7Z5H4 357 aa5.73□□□□□ -1.49
ECHDC1-213ENST00000474240 NPAS4Q8IUM7 802 aa5.73□□□□□ -1.49
ECHDC1-213ENST00000474240 TOX2Q96NM4 488 aa5.73□□□□□ -1.49
ECHDC1-213ENST00000474240 OSMRQ99650 979 aa5.73□□□□□ -1.49
ECHDC1-213ENST00000474240 BHLHE41Q9C0J9 482 aaPredicted RBP5.73□□□□□ -1.49
ECHDC1-213ENST00000474240 SEMA6CQ9H3T2 930 aa5.73□□□□□ -1.49
ECHDC1-213ENST00000474240 LRRC10BA6NIK2 292 aa5.72□□□□□ -1.49
ECHDC1-213ENST00000474240 GADD45BO75293 160 aaPredicted RBP5.72□□□□□ -1.49
ECHDC1-213ENST00000474240 LDHBP07195 334 aaKnown RBP5.72□□□□□ -1.49
ECHDC1-213ENST00000474240 P4HBP07237 508 aaKnown RBP5.72□□□□□ -1.49
ECHDC1-213ENST00000474240 CD8BP10966 210 aa5.72□□□□□ -1.49
ECHDC1-213ENST00000474240 CD96P40200 585 aa5.72□□□□□ -1.49
ECHDC1-213ENST00000474240 PTPN12Q05209 780 aaKnown RBP5.72□□□□□ -1.49
ECHDC1-213ENST00000474240 ZNF326Q5BKZ1 582 aaKnown RBP5.72□□□□□ -1.49
ECHDC1-213ENST00000474240 C1QL4Q86Z23 238 aa5.72□□□□□ -1.49
ECHDC1-213ENST00000474240 ZKSCAN3Q9BRR0 538 aa5.72□□□□□ -1.49
ECHDC1-213ENST00000474240 NPHS2Q9NP85 383 aa5.72□□□□□ -1.49
ECHDC1-213ENST00000474240 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms