RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 FOXD4Q12950 439 aaPredicted RBP3.57□□□□□ -1.84
XRN1-210ENST00000472697 RASGRF1Q13972 1273 aa3.57□□□□□ -1.84
XRN1-210ENST00000472697 SEPT7Q16181 437 aaKnown RBP3.57□□□□□ -1.84
XRN1-210ENST00000472697 TM4SF20Q53R12 229 aa3.57□□□□□ -1.84
XRN1-210ENST00000472697 TPH2Q8IWU9 490 aa3.57□□□□□ -1.84
XRN1-210ENST00000472697 MTMR8Q96EF0 704 aa3.57□□□□□ -1.84
XRN1-210ENST00000472697 BRINP2Q9C0B6 783 aa3.57□□□□□ -1.84
XRN1-210ENST00000472697 LIN7BQ9HAP6 207 aa3.57□□□□□ -1.84
XRN1-210ENST00000472697 BRD7Q9NPI1 651 aa3.57□□□□□ -1.84
XRN1-210ENST00000472697 INTUQ9ULD6 942 aa3.57□□□□□ -1.84
XRN1-210ENST00000472697 PCDHB14Q9Y5E9 798 aa3.57□□□□□ -1.84
XRN1-210ENST00000472697 ZCCHC6Q5VYS8 1495 aaKnown RBP3.57□□□□□ -1.84
XRN1-210ENST00000472697 GUCY2FP51841 1108 aa3.57□□□□□ -1.84
XRN1-210ENST00000472697 EXOSC10Q01780 885 aaKnown RBP3.57□□□□□ -1.84
XRN1-210ENST00000472697 PABPC4Q13310 644 aaKnown RBP eCLIP3.57□□□□□ -1.84
XRN1-210ENST00000472697 TCIRG1Q13488 830 aa3.57□□□□□ -1.84
XRN1-210ENST00000472697 CCNJLQ8IV13 435 aa3.57□□□□□ -1.84
XRN1-210ENST00000472697 CMIPQ8IY22 773 aa3.57□□□□□ -1.84
XRN1-210ENST00000472697 NIM1KQ8IY84 436 aa3.57□□□□□ -1.84
XRN1-210ENST00000472697 GRIP2Q9C0E4 1043 aa3.57□□□□□ -1.84
XRN1-210ENST00000472697 ENAMQ9NRM1 1142 aa3.57□□□□□ -1.84
XRN1-210ENST00000472697 FIGNL2A6NMB9 653 aa3.56□□□□□ -1.84
XRN1-210ENST00000472697 TNFRSF10AO00220 468 aa3.56□□□□□ -1.84
XRN1-210ENST00000472697 PGRP06401 933 aa3.56□□□□□ -1.84
XRN1-210ENST00000472697 FGD1P98174 961 aa3.56□□□□□ -1.84
XRN1-210ENST00000472697 IFRD2Q12894 506 aaPredicted RBP3.56□□□□□ -1.84
XRN1-210ENST00000472697 SUZ12Q15022 739 aaKnown RBP3.56□□□□□ -1.84
XRN1-210ENST00000472697 PCBP1Q15365 356 aaKnown RBP eCLIP3.56□□□□□ -1.84
XRN1-210ENST00000472697 XP32Q5T750 250 aa3.56□□□□□ -1.84
XRN1-210ENST00000472697 CNNM4Q6P4Q7 775 aa3.56□□□□□ -1.84
XRN1-210ENST00000472697 SLC4A10Q6U841 1118 aa3.56□□□□□ -1.84
XRN1-210ENST00000472697 NCAPG2Q86XI2 1143 aa3.56□□□□□ -1.84
XRN1-210ENST00000472697 SMC5Q8IY18 1101 aa3.56□□□□□ -1.84
XRN1-210ENST00000472697 NLRP3Q96P20 1036 aa3.56□□□□□ -1.84
XRN1-210ENST00000472697 YIPF4Q9BSR8 244 aa3.56□□□□□ -1.84
XRN1-210ENST00000472697 ZNRF3Q9ULT6 936 aa3.56□□□□□ -1.84
XRN1-210ENST00000472697 BLACEA4D250 179 aa3.56□□□□□ -1.84
XRN1-210ENST00000472697 CLSTN1O94985 981 aa3.56□□□□□ -1.84
XRN1-210ENST00000472697 BMP1P13497 986 aa3.56□□□□□ -1.84
XRN1-210ENST00000472697 BMP6P22004 513 aa3.56□□□□□ -1.84
XRN1-210ENST00000472697 PLAURQ03405 335 aa3.56□□□□□ -1.84
XRN1-210ENST00000472697 DHX9Q08211 1270 aaKnown RBP3.56□□□□□ -1.84
XRN1-210ENST00000472697 INPP5AQ14642 412 aa3.56□□□□□ -1.84
XRN1-210ENST00000472697 PPP2R5AQ15172 486 aa3.56□□□□□ -1.84
XRN1-210ENST00000472697 SF1Q15637 639 aaKnown RBP3.56□□□□□ -1.84
XRN1-210ENST00000472697 CCDC181Q5TID7 509 aa3.56□□□□□ -1.84
XRN1-210ENST00000472697 FGD2Q7Z6J4 655 aa3.56□□□□□ -1.84
XRN1-210ENST00000472697 AFAP1L2Q8N4X5 818 aa3.56□□□□□ -1.84
XRN1-210ENST00000472697 JMYQ8N9B5 988 aa3.56□□□□□ -1.84
XRN1-210ENST00000472697 GATAD2BQ8WXI9 593 aa3.56□□□□□ -1.84
XRN1-210ENST00000472697 CCDC113Q9H0I3 377 aa3.56□□□□□ -1.84
XRN1-210ENST00000472697 SLKQ9H2G2 1235 aaPredicted RBP3.56□□□□□ -1.84
XRN1-210ENST00000472697 EIF4ENIF1Q9NRA8 985 aaKnown RBP3.56□□□□□ -1.84
XRN1-210ENST00000472697 PRKAB1Q9Y478 270 aa3.56□□□□□ -1.84
XRN1-210ENST00000472697 PDS5BQ9NTI5 1447 aa3.55□□□□□ -1.84
XRN1-210ENST00000472697 A0A1W2PNR3 127 aa3.55□□□□□ -1.84
XRN1-210ENST00000472697 GSG1L2A8MUP6 293 aa3.55□□□□□ -1.84
XRN1-210ENST00000472697 LMNB2Q03252 620 aa3.55□□□□□ -1.84
XRN1-210ENST00000472697 UBE4AQ14139 1066 aa3.55□□□□□ -1.84
XRN1-210ENST00000472697 SLC10A6Q3KNW5 377 aa3.55□□□□□ -1.84
XRN1-210ENST00000472697 C6orf118Q5T5N4 469 aa3.55□□□□□ -1.84
XRN1-210ENST00000472697 TDRD10Q5VZ19 366 aaKnown RBP3.55□□□□□ -1.84
XRN1-210ENST00000472697 FAM178BQ8IXR5 827 aa3.55□□□□□ -1.84
XRN1-210ENST00000472697 TTC8Q8TAM2 541 aa3.55□□□□□ -1.84
XRN1-210ENST00000472697 LEO1Q8WVC0 666 aaPredicted RBP3.55□□□□□ -1.84
XRN1-210ENST00000472697 ARNT2Q9HBZ2 717 aa3.55□□□□□ -1.84
XRN1-210ENST00000472697 GPN3Q9UHW5 284 aaPredicted RBP3.55□□□□□ -1.84
XRN1-210ENST00000472697 EYA4O95677 639 aa3.55□□□□□ -1.84
XRN1-210ENST00000472697 PSAPP07602 524 aa3.55□□□□□ -1.84
XRN1-210ENST00000472697 INSM1Q01101 510 aaPredicted RBP3.55□□□□□ -1.84
XRN1-210ENST00000472697 ITKQ08881 620 aa3.55□□□□□ -1.84
XRN1-210ENST00000472697 NR5A1Q13285 461 aa3.55□□□□□ -1.84
XRN1-210ENST00000472697 KIAA0319Q5VV43 1072 aa3.55□□□□□ -1.84
XRN1-210ENST00000472697 IL31Q6EBC2 164 aa3.55□□□□□ -1.84
XRN1-210ENST00000472697 PKN3Q6P5Z2 889 aa3.55□□□□□ -1.84
XRN1-210ENST00000472697 THAP3Q8WTV1 239 aaPredicted RBP3.55□□□□□ -1.84
XRN1-210ENST00000472697 ZNF775Q96BV0 537 aaPredicted RBP3.55□□□□□ -1.84
XRN1-210ENST00000472697 FRMD6Q96NE9 622 aa3.55□□□□□ -1.84
XRN1-210ENST00000472697 SRCIN1Q9C0H9 1055 aa3.55□□□□□ -1.84
XRN1-210ENST00000472697 SLC12A5Q9H2X9 1139 aa3.55□□□□□ -1.84
XRN1-210ENST00000472697 PPCSQ9HAB8 311 aa3.55□□□□□ -1.84
XRN1-210ENST00000472697 MRC2Q9UBG0 1479 aa3.54□□□□□ -1.84
XRN1-210ENST00000472697 SOBPA7XYQ1 873 aa3.54□□□□□ -1.84
XRN1-210ENST00000472697 ZBTB42B2RXF5 422 aa3.54□□□□□ -1.84
XRN1-210ENST00000472697 GABRDO14764 452 aa3.54□□□□□ -1.84
XRN1-210ENST00000472697 BPNT1O95861 308 aa3.54□□□□□ -1.84
XRN1-210ENST00000472697 ATF3P18847 181 aa3.54□□□□□ -1.84
XRN1-210ENST00000472697 NFKB1P19838 968 aa3.54□□□□□ -1.84
XRN1-210ENST00000472697 CCNFP41002 786 aa3.54□□□□□ -1.84
XRN1-210ENST00000472697 ZNF423Q2M1K9 1284 aa3.54□□□□□ -1.84
XRN1-210ENST00000472697 KSR2Q6VAB6 950 aa3.54□□□□□ -1.84
XRN1-210ENST00000472697 LRRTM3Q86VH5 581 aa3.54□□□□□ -1.84
XRN1-210ENST00000472697 VPS37AQ8NEZ2 397 aa3.54□□□□□ -1.84
XRN1-210ENST00000472697 PARD3BQ8TEW8 1205 aa3.54□□□□□ -1.84
XRN1-210ENST00000472697 KLHL6Q8WZ60 621 aa3.54□□□□□ -1.84
XRN1-210ENST00000472697 SLC30A3Q99726 388 aa3.54□□□□□ -1.84
XRN1-210ENST00000472697 RASSF4Q9H2L5 321 aa3.54□□□□□ -1.84
XRN1-210ENST00000472697 IGFLR1Q9H665 355 aa3.54□□□□□ -1.84
XRN1-210ENST00000472697 POLMQ9NP87 494 aaPredicted RBP3.54□□□□□ -1.84
XRN1-210ENST00000472697 ARHGEF4Q9NR80 690 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms