RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 ZNF646O15015 1829 aaPredicted RBP20.85■□□□□ 0.93
HSPG2-208ENST00000471322 DSCC1Q9BVC3 393 aa20.84■□□□□ 0.93
HSPG2-208ENST00000471322 SLC27A2O14975 620 aa20.83■□□□□ 0.93
HSPG2-208ENST00000471322 KRT32Q14532 448 aa20.83■□□□□ 0.93
HSPG2-208ENST00000471322 GRIK5Q16478 980 aa20.83■□□□□ 0.93
HSPG2-208ENST00000471322 KIF4BQ2VIQ3 1234 aa20.83■□□□□ 0.93
HSPG2-208ENST00000471322 CHADLQ6NUI6 762 aa20.83■□□□□ 0.93
HSPG2-208ENST00000471322 OGFOD1Q8N543 542 aa20.83■□□□□ 0.93
HSPG2-208ENST00000471322 ASTN2O75129 1339 aaPredicted RBP20.83■□□□□ 0.93
HSPG2-208ENST00000471322 FAM205AQ6ZU69 1335 aa20.83■□□□□ 0.93
HSPG2-208ENST00000471322 COL1A1P02452 1464 aaPredicted RBP20.83■□□□□ 0.92
HSPG2-208ENST00000471322 NBR1Q14596 966 aa20.82■□□□□ 0.92
HSPG2-208ENST00000471322 UPF3BQ9BZI7 483 aaKnown RBP20.82■□□□□ 0.92
HSPG2-208ENST00000471322 ZSWIM6Q9HCJ5 1215 aa20.82■□□□□ 0.92
HSPG2-208ENST00000471322 MYOZ2Q9NPC6 264 aa20.82■□□□□ 0.92
HSPG2-208ENST00000471322 GNL3LQ9NVN8 582 aaKnown RBP20.82■□□□□ 0.92
HSPG2-208ENST00000471322 CYP46A1Q9Y6A2 500 aa20.82■□□□□ 0.92
HSPG2-208ENST00000471322 MYO3BQ8WXR4 1341 aa20.82■□□□□ 0.92
HSPG2-208ENST00000471322 ZNF280AP59817 542 aaPredicted RBP20.82■□□□□ 0.92
HSPG2-208ENST00000471322 NFKBIBQ15653 356 aa20.82■□□□□ 0.92
HSPG2-208ENST00000471322 SPATA5Q8NB90 893 aa20.82■□□□□ 0.92
HSPG2-208ENST00000471322 APPBP2Q92624 585 aa20.82■□□□□ 0.92
HSPG2-208ENST00000471322 JAKMIP1Q96N16 626 aaKnown RBP20.82■□□□□ 0.92
HSPG2-208ENST00000471322 SEC62Q99442 399 aaKnown RBP20.82■□□□□ 0.92
HSPG2-208ENST00000471322 PCDHAC2Q9Y5I4 1007 aa20.82■□□□□ 0.92
HSPG2-208ENST00000471322 CYP2E1P05181 493 aaPredicted RBP20.81■□□□□ 0.92
HSPG2-208ENST00000471322 CASTP20810 708 aaKnown RBP20.81■□□□□ 0.92
HSPG2-208ENST00000471322 RASGRF1Q13972 1273 aa20.81■□□□□ 0.92
HSPG2-208ENST00000471322 VPS53Q5VIR6 699 aa20.81■□□□□ 0.92
HSPG2-208ENST00000471322 TMX3Q96JJ7 454 aa20.81■□□□□ 0.92
HSPG2-208ENST00000471322 SCAF8Q9UPN6 1271 aaKnown RBP20.81■□□□□ 0.92
HSPG2-208ENST00000471322 FMR1Q06787 632 aaKnown RBP eCLIP20.8■□□□□ 0.92
HSPG2-208ENST00000471322 UBE3CQ15386 1083 aa20.8■□□□□ 0.92
HSPG2-208ENST00000471322 PI16Q6UXB8 463 aa20.8■□□□□ 0.92
HSPG2-208ENST00000471322 TTC14Q96N46 770 aa20.8■□□□□ 0.92
HSPG2-208ENST00000471322 MAST3O60307 1309 aa20.79■□□□□ 0.92
HSPG2-208ENST00000471322 FSTL1Q12841 308 aa20.79■□□□□ 0.92
HSPG2-208ENST00000471322 CUL4AQ13619 759 aa20.79■□□□□ 0.92
HSPG2-208ENST00000471322 NBPF9Q3BBW0 867 aa20.79■□□□□ 0.92
HSPG2-208ENST00000471322 DLK2Q6UY11 383 aa20.79■□□□□ 0.92
HSPG2-208ENST00000471322 CCDC129Q6ZRS4 1044 aa20.79■□□□□ 0.92
HSPG2-208ENST00000471322 RUFY3Q7L099 469 aa20.79■□□□□ 0.92
HSPG2-208ENST00000471322 INTS4Q96HW7 963 aaKnown RBP20.79■□□□□ 0.92
HSPG2-208ENST00000471322 TTF2Q9UNY4 1162 aaKnown RBP20.79■□□□□ 0.92
HSPG2-208ENST00000471322 ARAP2Q8WZ64 1704 aa20.79■□□□□ 0.92
HSPG2-208ENST00000471322 ADAMTSL1Q8N6G6 1762 aa20.79■□□□□ 0.92
HSPG2-208ENST00000471322 OSBP2Q969R2 916 aa20.78■□□□□ 0.92
HSPG2-208ENST00000471322 HDAC9Q9UKV0 1011 aa20.78■□□□□ 0.92
HSPG2-208ENST00000471322 TRAF5O00463 557 aa20.78■□□□□ 0.92
HSPG2-208ENST00000471322 CHGBP05060 677 aa20.78■□□□□ 0.92
HSPG2-208ENST00000471322 ADD2P35612 726 aa20.78■□□□□ 0.92
HSPG2-208ENST00000471322 RBM5P52756 815 aaKnown RBP eCLIP20.78■□□□□ 0.92
HSPG2-208ENST00000471322 MAP3K12Q12852 859 aa20.78■□□□□ 0.92
HSPG2-208ENST00000471322 SLC9C2Q5TAH2 1124 aa20.78■□□□□ 0.92
HSPG2-208ENST00000471322 PDRG1Q9NUG6 133 aa20.78■□□□□ 0.92
HSPG2-208ENST00000471322 CTNNA3Q9UI47 895 aa20.78■□□□□ 0.92
HSPG2-208ENST00000471322 RPAP1Q9BWH6 1393 aaPredicted RBP20.77■□□□□ 0.92
HSPG2-208ENST00000471322 FKBP1AP62942 108 aaKnown RBP20.77■□□□□ 0.92
HSPG2-208ENST00000471322 GLIS2Q9BZE0 524 aaPredicted RBP20.77■□□□□ 0.92
HSPG2-208ENST00000471322 ALDH8A1Q9H2A2 487 aaPredicted RBP20.77■□□□□ 0.92
HSPG2-208ENST00000471322 PIH1D3Q9NQM4 214 aaKnown RBP20.77■□□□□ 0.92
HSPG2-208ENST00000471322 GGA3Q9NZ52 723 aa20.77■□□□□ 0.92
HSPG2-208ENST00000471322 DENND2AQ9ULE3 1009 aa20.77■□□□□ 0.92
HSPG2-208ENST00000471322 LIMCH1Q9UPQ0 1083 aa20.77■□□□□ 0.92
HSPG2-208ENST00000471322 M0R2C6 588 aa20.76■□□□□ 0.91
HSPG2-208ENST00000471322 WNT10BO00744 389 aa20.76■□□□□ 0.91
HSPG2-208ENST00000471322 IDH1O75874 414 aaKnown RBP20.76■□□□□ 0.91
HSPG2-208ENST00000471322 HSPD1P10809 573 aaKnown RBP20.76■□□□□ 0.91
HSPG2-208ENST00000471322 PRDX5P30044 214 aa20.76■□□□□ 0.91
HSPG2-208ENST00000471322 NUCB2P80303 420 aa20.76■□□□□ 0.91
HSPG2-208ENST00000471322 HTRA3P83110 453 aa20.76■□□□□ 0.91
HSPG2-208ENST00000471322 ANKRD1Q15327 319 aa20.76■□□□□ 0.91
HSPG2-208ENST00000471322 ADCK5Q3MIX3 580 aa20.76■□□□□ 0.91
HSPG2-208ENST00000471322 BLOC1S2Q6QNY1 142 aa20.76■□□□□ 0.91
HSPG2-208ENST00000471322 WDR66Q8TBY9 1149 aa20.76■□□□□ 0.91
HSPG2-208ENST00000471322 TBC1D22AQ8WUA7 517 aa20.76■□□□□ 0.91
HSPG2-208ENST00000471322 ZSCAN31Q96LW9 406 aaPredicted RBP20.76■□□□□ 0.91
HSPG2-208ENST00000471322 FOXD4L1Q9NU39 408 aa20.76■□□□□ 0.91
HSPG2-208ENST00000471322 MYH13Q9UKX3 1938 aa20.76■□□□□ 0.91
HSPG2-208ENST00000471322 SEMA3EO15041 775 aa20.75■□□□□ 0.91
HSPG2-208ENST00000471322 ITGBL1O95965 494 aaPredicted RBP20.75■□□□□ 0.91
HSPG2-208ENST00000471322 CFAP100Q494V2 611 aa20.75■□□□□ 0.91
HSPG2-208ENST00000471322 ANGEL2Q5VTE6 544 aaKnown RBP20.75■□□□□ 0.91
HSPG2-208ENST00000471322 ABCF2Q9UG63 623 aa20.75■□□□□ 0.91
HSPG2-208ENST00000471322 ZBTB22O15209 634 aa20.75■□□□□ 0.91
HSPG2-208ENST00000471322 HMGB1P09429 215 aaKnown RBP20.75■□□□□ 0.91
HSPG2-208ENST00000471322 AK2P54819 239 aa20.75■□□□□ 0.91
HSPG2-208ENST00000471322 DLGAP5Q15398 846 aa20.75■□□□□ 0.91
HSPG2-208ENST00000471322 ZC3H15Q8WU90 426 aaKnown RBP20.75■□□□□ 0.91
HSPG2-208ENST00000471322 ADM5C9JUS6 153 aa20.74■□□□□ 0.91
HSPG2-208ENST00000471322 PDE6AP16499 860 aa20.74■□□□□ 0.91
HSPG2-208ENST00000471322 RAB3GAP1Q15042 981 aa20.74■□□□□ 0.91
HSPG2-208ENST00000471322 SLFNL1Q499Z3 407 aa20.74■□□□□ 0.91
HSPG2-208ENST00000471322 USP48Q86UV5 1035 aa20.74■□□□□ 0.91
HSPG2-208ENST00000471322 CYP21A2P08686 494 aa20.73■□□□□ 0.91
HSPG2-208ENST00000471322 KRT26Q7Z3Y9 468 aa20.73■□□□□ 0.91
HSPG2-208ENST00000471322 DCPSQ96C86 337 aaKnown RBP20.73■□□□□ 0.91
HSPG2-208ENST00000471322 PRMT6Q96LA8 375 aaPredicted RBP20.73■□□□□ 0.91
HSPG2-208ENST00000471322 NEK1Q96PY6 1258 aa20.73■□□□□ 0.91
HSPG2-208ENST00000471322 SH2B1Q9NRF2 756 aaPredicted RBP20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms