RNA–Protein interactions for RNA: ENST00000470776.1

LMCD1-207, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2

Gene LMCD1, Length 579 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-207ENST00000470776 SLC4A4Q9Y6R1 1079 aa10.6□□□□□ -0.71
LMCD1-207ENST00000470776 MYH7P12883 1935 aa10.6□□□□□ -0.71
LMCD1-207ENST00000470776 NFKBIEO00221 500 aa10.59□□□□□ -0.71
LMCD1-207ENST00000470776 ZNF213O14771 459 aa10.59□□□□□ -0.71
LMCD1-207ENST00000470776 PRKAB2O43741 272 aa10.59□□□□□ -0.71
LMCD1-207ENST00000470776 BAG3O95817 575 aa10.59□□□□□ -0.71
LMCD1-207ENST00000470776 VIL1P09327 827 aaKnown RBP10.59□□□□□ -0.71
LMCD1-207ENST00000470776 HMGB1P09429 215 aaKnown RBP10.59□□□□□ -0.71
LMCD1-207ENST00000470776 IARSP41252 1262 aaKnown RBP10.59□□□□□ -0.71
LMCD1-207ENST00000470776 NFKBIBQ15653 356 aa10.59□□□□□ -0.71
LMCD1-207ENST00000470776 STOX1Q6ZVD7 989 aa10.59□□□□□ -0.71
LMCD1-207ENST00000470776 FBXL16Q8N461 479 aa10.59□□□□□ -0.71
LMCD1-207ENST00000470776 JAKMIP1Q96N16 626 aaKnown RBP10.59□□□□□ -0.71
LMCD1-207ENST00000470776 NEK1Q96PY6 1258 aa10.59□□□□□ -0.71
LMCD1-207ENST00000470776 GMLQ99445 158 aa10.59□□□□□ -0.71
LMCD1-207ENST00000470776 NACAP1Q9BZK3 213 aa10.59□□□□□ -0.71
LMCD1-207ENST00000470776 TAOK3Q9H2K8 898 aa10.59□□□□□ -0.71
LMCD1-207ENST00000470776 KCNQ5Q9NR82 932 aa10.59□□□□□ -0.71
LMCD1-207ENST00000470776 MKRN1Q9UHC7 482 aaKnown RBP10.59□□□□□ -0.71
LMCD1-207ENST00000470776 CYP46A1Q9Y6A2 500 aa10.59□□□□□ -0.71
LMCD1-207ENST00000470776 MAST2Q6P0Q8 1798 aa10.59□□□□□ -0.71
LMCD1-207ENST00000470776 BRCA1P38398 1863 aaKnown RBP10.59□□□□□ -0.71
LMCD1-207ENST00000470776 MYO5AQ9Y4I1 1855 aaKnown RBP10.59□□□□□ -0.71
LMCD1-207ENST00000470776 E7EWF7 191 aa10.58□□□□□ -0.72
LMCD1-207ENST00000470776 K7ELQ4 463 aaPredicted RBP10.58□□□□□ -0.72
LMCD1-207ENST00000470776 PLCG2P16885 1265 aa10.58□□□□□ -0.72
LMCD1-207ENST00000470776 RPS6KB1P23443 525 aa10.58□□□□□ -0.72
LMCD1-207ENST00000470776 RHBDL3P58872 404 aa10.58□□□□□ -0.72
LMCD1-207ENST00000470776 EXOSC10Q01780 885 aaKnown RBP10.58□□□□□ -0.72
LMCD1-207ENST00000470776 DIXDC1Q155Q3 683 aa10.58□□□□□ -0.72
LMCD1-207ENST00000470776 SBK1Q52WX2 424 aa10.58□□□□□ -0.72
LMCD1-207ENST00000470776 HSCBQ8IWL3 235 aa10.58□□□□□ -0.72
LMCD1-207ENST00000470776 LARGE2Q8N3Y3 721 aa10.58□□□□□ -0.72
LMCD1-207ENST00000470776 AGXT2Q9BYV1 514 aa10.58□□□□□ -0.72
LMCD1-207ENST00000470776 CRNKL1Q9BZJ0 848 aaKnown RBP10.58□□□□□ -0.72
LMCD1-207ENST00000470776 NAPBQ9H115 298 aa10.58□□□□□ -0.72
LMCD1-207ENST00000470776 ZNF277Q9NRM2 450 aaPredicted RBP10.58□□□□□ -0.72
LMCD1-207ENST00000470776 AATFQ9NY61 560 aaKnown RBP eCLIP10.58□□□□□ -0.72
LMCD1-207ENST00000470776 ZNRF3Q9ULT6 936 aa10.58□□□□□ -0.72
LMCD1-207ENST00000470776 BCS1LQ9Y276 419 aa10.58□□□□□ -0.72
LMCD1-207ENST00000470776 DAGLAQ9Y4D2 1042 aa10.58□□□□□ -0.72
LMCD1-207ENST00000470776 WDR19Q8NEZ3 1342 aa10.58□□□□□ -0.72
LMCD1-207ENST00000470776 MYO3BQ8WXR4 1341 aa10.58□□□□□ -0.72
LMCD1-207ENST00000470776 APPP05067 770 aa10.57□□□□□ -0.72
LMCD1-207ENST00000470776 FGRP09769 529 aa10.57□□□□□ -0.72
LMCD1-207ENST00000470776 CASTP20810 708 aaKnown RBP10.57□□□□□ -0.72
LMCD1-207ENST00000470776 MMP14P50281 582 aa10.57□□□□□ -0.72
LMCD1-207ENST00000470776 GSE1Q14687 1217 aa10.57□□□□□ -0.72
LMCD1-207ENST00000470776 BLOC1S2Q6QNY1 142 aa10.57□□□□□ -0.72
LMCD1-207ENST00000470776 DHX32Q7L7V1 743 aaKnown RBP10.57□□□□□ -0.72
LMCD1-207ENST00000470776 ZDHHC15Q96MV8 337 aa10.57□□□□□ -0.72
LMCD1-207ENST00000470776 UPF3BQ9BZI7 483 aaKnown RBP10.57□□□□□ -0.72
LMCD1-207ENST00000470776 NBPF3Q9H094 633 aa10.57□□□□□ -0.72
LMCD1-207ENST00000470776 DCP1AQ9NPI6 582 aaPredicted RBP10.57□□□□□ -0.72
LMCD1-207ENST00000470776 TTF2Q9UNY4 1162 aaKnown RBP10.57□□□□□ -0.72
LMCD1-207ENST00000470776 COL4A5P29400 1685 aa10.57□□□□□ -0.72
LMCD1-207ENST00000470776 PCP11498 1178 aaKnown RBP10.56□□□□□ -0.72
LMCD1-207ENST00000470776 BTDP43251 543 aa10.56□□□□□ -0.72
LMCD1-207ENST00000470776 NT5C2P49902 561 aa10.56□□□□□ -0.72
LMCD1-207ENST00000470776 CUL4AQ13619 759 aa10.56□□□□□ -0.72
LMCD1-207ENST00000470776 COL9A3Q14050 684 aaPredicted RBP10.56□□□□□ -0.72
LMCD1-207ENST00000470776 APOBEC3HQ6NTF7 200 aaKnown RBP10.56□□□□□ -0.72
LMCD1-207ENST00000470776 RSBN1LQ6PCB5 846 aaPredicted RBP10.56□□□□□ -0.72
LMCD1-207ENST00000470776 CTR9Q6PD62 1173 aa10.56□□□□□ -0.72
LMCD1-207ENST00000470776 NIM1KQ8IY84 436 aa10.56□□□□□ -0.72
LMCD1-207ENST00000470776 AGBL3Q8NEM8 1001 aa10.56□□□□□ -0.72
LMCD1-207ENST00000470776 SH3RF3Q8TEJ3 882 aaPredicted RBP10.56□□□□□ -0.72
LMCD1-207ENST00000470776 SDR42E1Q8WUS8 393 aa10.56□□□□□ -0.72
LMCD1-207ENST00000470776 STAG1Q8WVM7 1258 aa10.56□□□□□ -0.72
LMCD1-207ENST00000470776 TEKT1Q969V4 418 aa10.56□□□□□ -0.72
LMCD1-207ENST00000470776 NOL10Q9BSC4 688 aaKnown RBP10.56□□□□□ -0.72
LMCD1-207ENST00000470776 MTA3Q9BTC8 594 aa10.56□□□□□ -0.72
LMCD1-207ENST00000470776 MXD3Q9BW11 206 aa10.56□□□□□ -0.72
LMCD1-207ENST00000470776 PDRG1Q9NUG6 133 aa10.56□□□□□ -0.72
LMCD1-207ENST00000470776 SERPINA10Q9UK55 444 aa10.56□□□□□ -0.72
LMCD1-207ENST00000470776 CHD4Q14839 1912 aa10.56□□□□□ -0.72
LMCD1-207ENST00000470776 MYH13Q9UKX3 1938 aa10.56□□□□□ -0.72
LMCD1-207ENST00000470776 FZD9O00144 591 aa10.55□□□□□ -0.72
LMCD1-207ENST00000470776 CPA1P15085 419 aa10.55□□□□□ -0.72
LMCD1-207ENST00000470776 CRKP46108 304 aa10.55□□□□□ -0.72
LMCD1-207ENST00000470776 SLC4A3P48751 1232 aa10.55□□□□□ -0.72
LMCD1-207ENST00000470776 TDO2P48775 406 aa10.55□□□□□ -0.72
LMCD1-207ENST00000470776 AK2P54819 239 aa10.55□□□□□ -0.72
LMCD1-207ENST00000470776 EVCP57679 992 aa10.55□□□□□ -0.72
LMCD1-207ENST00000470776 CXCL9Q07325 125 aa10.55□□□□□ -0.72
LMCD1-207ENST00000470776 ANKRD1Q15327 319 aa10.55□□□□□ -0.72
LMCD1-207ENST00000470776 AKNAD1Q5T1N1 836 aa10.55□□□□□ -0.72
LMCD1-207ENST00000470776 TBC1D10CQ8IV04 446 aa10.55□□□□□ -0.72
LMCD1-207ENST00000470776 MB21D2Q8IYB1 491 aaPredicted RBP10.55□□□□□ -0.72
LMCD1-207ENST00000470776 NCOA7Q8NI08 942 aa10.55□□□□□ -0.72
LMCD1-207ENST00000470776 TACC3Q9Y6A5 838 aa10.55□□□□□ -0.72
LMCD1-207ENST00000470776 ZNF646O15015 1829 aaPredicted RBP10.55□□□□□ -0.72
LMCD1-207ENST00000470776 FER1L6Q2WGJ9 1857 aa10.55□□□□□ -0.72
LMCD1-207ENST00000470776 USP17L12C9JPN9 530 aa10.54□□□□□ -0.72
LMCD1-207ENST00000470776 USP17L21D6R901 530 aa10.54□□□□□ -0.72
LMCD1-207ENST00000470776 PSMD14O00487 310 aa10.54□□□□□ -0.72
LMCD1-207ENST00000470776 PRELPP51888 382 aa10.54□□□□□ -0.72
LMCD1-207ENST00000470776 HAND2P61296 217 aa10.54□□□□□ -0.72
LMCD1-207ENST00000470776 PPARAQ07869 468 aa10.54□□□□□ -0.72
LMCD1-207ENST00000470776 TOB2Q14106 344 aaPredicted RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms