RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 CDK5RAP2Q96SN8 1893 aa18.02■□□□□ 0.48
COL4A5-203ENST00000470339 ZSWIM6Q9HCJ5 1215 aa18.02■□□□□ 0.48
COL4A5-203ENST00000470339 ATP8A2Q9NTI2 1148 aa18.02■□□□□ 0.48
COL4A5-203ENST00000470339 MYO3BQ8WXR4 1341 aa18.01■□□□□ 0.47
COL4A5-203ENST00000470339 YDJCA8MPS7 323 aa18.01■□□□□ 0.47
COL4A5-203ENST00000470339 NFKBIEO00221 500 aa18.01■□□□□ 0.47
COL4A5-203ENST00000470339 ZNF213O14771 459 aa18.01■□□□□ 0.47
COL4A5-203ENST00000470339 NEK4P51957 841 aa18.01■□□□□ 0.47
COL4A5-203ENST00000470339 DYNLL1P63167 89 aaKnown RBP18.01■□□□□ 0.47
COL4A5-203ENST00000470339 HHIPL2Q6UWX4 724 aa18.01■□□□□ 0.47
COL4A5-203ENST00000470339 NAPBQ9H115 298 aa18.01■□□□□ 0.47
COL4A5-203ENST00000470339 KCNQ5Q9NR82 932 aa18.01■□□□□ 0.47
COL4A5-203ENST00000470339 AATFQ9NY61 560 aaKnown RBP eCLIP18.01■□□□□ 0.47
COL4A5-203ENST00000470339 DAXXQ9UER7 740 aaPredicted RBP18.01■□□□□ 0.47
COL4A5-203ENST00000470339 DICER1Q9UPY3 1922 aaKnown RBP18.01■□□□□ 0.47
COL4A5-203ENST00000470339 FOCADQ5VW36 1801 aa18■□□□□ 0.47
COL4A5-203ENST00000470339 BAZ2AQ9UIF9 1905 aaKnown RBP18■□□□□ 0.47
COL4A5-203ENST00000470339 VIL1P09327 827 aaKnown RBP18■□□□□ 0.47
COL4A5-203ENST00000470339 HMGB1P09429 215 aaKnown RBP18■□□□□ 0.47
COL4A5-203ENST00000470339 DIXDC1Q155Q3 683 aa18■□□□□ 0.47
COL4A5-203ENST00000470339 HSCBQ8IWL3 235 aa18■□□□□ 0.47
COL4A5-203ENST00000470339 JAKMIP1Q96N16 626 aaKnown RBP18■□□□□ 0.47
COL4A5-203ENST00000470339 TBC1D2Q9BYX2 928 aa18■□□□□ 0.47
COL4A5-203ENST00000470339 TTF2Q9UNY4 1162 aaKnown RBP18■□□□□ 0.47
COL4A5-203ENST00000470339 CYP46A1Q9Y6A2 500 aa18■□□□□ 0.47
COL4A5-203ENST00000470339 COL4A5P29400 1685 aa17.99■□□□□ 0.47
COL4A5-203ENST00000470339 PRKAB2O43741 272 aa17.99■□□□□ 0.47
COL4A5-203ENST00000470339 CASTP20810 708 aaKnown RBP17.99■□□□□ 0.47
COL4A5-203ENST00000470339 ADCK5Q3MIX3 580 aa17.99■□□□□ 0.47
COL4A5-203ENST00000470339 RUFY3Q7L099 469 aa17.99■□□□□ 0.47
COL4A5-203ENST00000470339 JDP2Q8WYK2 163 aa17.99■□□□□ 0.47
COL4A5-203ENST00000470339 SYT17Q9BSW7 474 aa17.99■□□□□ 0.47
COL4A5-203ENST00000470339 ALDH8A1Q9H2A2 487 aaPredicted RBP17.99■□□□□ 0.47
COL4A5-203ENST00000470339 EPB41L4AQ9HCS5 686 aaPredicted RBP17.99■□□□□ 0.47
COL4A5-203ENST00000470339 ECM29Q5VYK3 1845 aa17.99■□□□□ 0.47
COL4A5-203ENST00000470339 E7EWF7 191 aa17.98■□□□□ 0.47
COL4A5-203ENST00000470339 TDO2P48775 406 aa17.98■□□□□ 0.47
COL4A5-203ENST00000470339 MMP14P50281 582 aa17.98■□□□□ 0.47
COL4A5-203ENST00000470339 RSBN1LQ6PCB5 846 aaPredicted RBP17.98■□□□□ 0.47
COL4A5-203ENST00000470339 BLOC1S2Q6QNY1 142 aa17.98■□□□□ 0.47
COL4A5-203ENST00000470339 TEKT1Q969V4 418 aa17.98■□□□□ 0.47
COL4A5-203ENST00000470339 NEK1Q96PY6 1258 aa17.98■□□□□ 0.47
COL4A5-203ENST00000470339 DAGLAQ9Y4D2 1042 aa17.98■□□□□ 0.47
COL4A5-203ENST00000470339 SBF1O95248 1867 aa17.97■□□□□ 0.47
COL4A5-203ENST00000470339 BTDP43251 543 aa17.97■□□□□ 0.47
COL4A5-203ENST00000470339 ZDHHC15Q96MV8 337 aa17.97■□□□□ 0.47
COL4A5-203ENST00000470339 TTC14Q96N46 770 aa17.97■□□□□ 0.47
COL4A5-203ENST00000470339 MXD3Q9BW11 206 aa17.97■□□□□ 0.47
COL4A5-203ENST00000470339 ANAPC4Q9UJX5 808 aa17.97■□□□□ 0.47
COL4A5-203ENST00000470339 SERPINA10Q9UK55 444 aa17.97■□□□□ 0.47
COL4A5-203ENST00000470339 TAF6LQ9Y6J9 622 aa17.97■□□□□ 0.47
COL4A5-203ENST00000470339 LAMB1P07942 1786 aa17.96■□□□□ 0.47
COL4A5-203ENST00000470339 TIAM2Q8IVF5 1701 aa17.96■□□□□ 0.47
COL4A5-203ENST00000470339 RPS6KB1P23443 525 aa17.96■□□□□ 0.47
COL4A5-203ENST00000470339 TNIP1Q15025 636 aa17.96■□□□□ 0.47
COL4A5-203ENST00000470339 SBK1Q52WX2 424 aa17.96■□□□□ 0.47
COL4A5-203ENST00000470339 AGBL3Q8NEM8 1001 aa17.96■□□□□ 0.47
COL4A5-203ENST00000470339 SH3RF3Q8TEJ3 882 aaPredicted RBP17.96■□□□□ 0.47
COL4A5-203ENST00000470339 SDR42E1Q8WUS8 393 aa17.96■□□□□ 0.47
COL4A5-203ENST00000470339 GMLQ99445 158 aa17.96■□□□□ 0.47
COL4A5-203ENST00000470339 UPF3BQ9BZI7 483 aaKnown RBP17.96■□□□□ 0.47
COL4A5-203ENST00000470339 DCP1AQ9NPI6 582 aaPredicted RBP17.96■□□□□ 0.47
COL4A5-203ENST00000470339 MKRN1Q9UHC7 482 aaKnown RBP17.96■□□□□ 0.47
COL4A5-203ENST00000470339 NAV1Q8NEY1 1877 aa17.96■□□□□ 0.47
COL4A5-203ENST00000470339 K7ELQ4 463 aaPredicted RBP17.95■□□□□ 0.46
COL4A5-203ENST00000470339 PSMD14O00487 310 aa17.95■□□□□ 0.46
COL4A5-203ENST00000470339 PCP11498 1178 aaKnown RBP17.95■□□□□ 0.46
COL4A5-203ENST00000470339 CRKP46108 304 aa17.95■□□□□ 0.46
COL4A5-203ENST00000470339 RHBDL3P58872 404 aa17.95■□□□□ 0.46
COL4A5-203ENST00000470339 STOX1Q6ZVD7 989 aa17.95■□□□□ 0.46
COL4A5-203ENST00000470339 DHX32Q7L7V1 743 aaKnown RBP17.95■□□□□ 0.46
COL4A5-203ENST00000470339 PDRG1Q9NUG6 133 aa17.95■□□□□ 0.46
COL4A5-203ENST00000470339 MYH1P12882 1939 aa17.95■□□□□ 0.46
COL4A5-203ENST00000470339 F8W031 263 aaPredicted RBP17.94■□□□□ 0.46
COL4A5-203ENST00000470339 RAD17O75943 681 aa17.94■□□□□ 0.46
COL4A5-203ENST00000470339 CD2BP2O95400 341 aaKnown RBP17.94■□□□□ 0.46
COL4A5-203ENST00000470339 USP5P45974 858 aa17.94■□□□□ 0.46
COL4A5-203ENST00000470339 HAND2P61296 217 aa17.94■□□□□ 0.46
COL4A5-203ENST00000470339 CXCL9Q07325 125 aa17.94■□□□□ 0.46
COL4A5-203ENST00000470339 ANKRD1Q15327 319 aa17.94■□□□□ 0.46
COL4A5-203ENST00000470339 CIAPIN1Q6FI81 312 aa17.94■□□□□ 0.46
COL4A5-203ENST00000470339 KIAA0825Q8IV33 1275 aa17.94■□□□□ 0.46
COL4A5-203ENST00000470339 NBPF3Q9H094 633 aa17.94■□□□□ 0.46
COL4A5-203ENST00000470339 RNF41Q9H4P4 317 aaPredicted RBP17.94■□□□□ 0.46
COL4A5-203ENST00000470339 CNNM2Q9H8M5 875 aa17.94■□□□□ 0.46
COL4A5-203ENST00000470339 ARPP21Q9UBL0 812 aaPredicted RBP17.94■□□□□ 0.46
COL4A5-203ENST00000470339 WDR19Q8NEZ3 1342 aa17.94■□□□□ 0.46
COL4A5-203ENST00000470339 NT5C2P49902 561 aa17.93■□□□□ 0.46
COL4A5-203ENST00000470339 SCNN1DP51172 638 aa17.93■□□□□ 0.46
COL4A5-203ENST00000470339 PPARAQ07869 468 aa17.93■□□□□ 0.46
COL4A5-203ENST00000470339 TRDNQ13061 729 aa17.93■□□□□ 0.46
COL4A5-203ENST00000470339 AKNAD1Q5T1N1 836 aa17.93■□□□□ 0.46
COL4A5-203ENST00000470339 APOBEC3HQ6NTF7 200 aaKnown RBP17.93■□□□□ 0.46
COL4A5-203ENST00000470339 CTR9Q6PD62 1173 aa17.93■□□□□ 0.46
COL4A5-203ENST00000470339 TEX11Q8IYF3 940 aa17.93■□□□□ 0.46
COL4A5-203ENST00000470339 FBXL16Q8N461 479 aa17.93■□□□□ 0.46
COL4A5-203ENST00000470339 NCOA7Q8NI08 942 aa17.93■□□□□ 0.46
COL4A5-203ENST00000470339 STAG1Q8WVM7 1258 aa17.93■□□□□ 0.46
COL4A5-203ENST00000470339 HDAC9Q9UKV0 1011 aa17.93■□□□□ 0.46
COL4A5-203ENST00000470339 ADAMTSL1Q8N6G6 1762 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms