RNA–Protein interactions for RNA: ENST00000470259.1

ITGA6-209, Transcript of integrin subunit alpha 6, humanhuman

TSL 3

Gene ITGA6, Length 365 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-209ENST00000470259 CCDC86Q9H6F5 360 aaKnown RBP7.37□□□□□ -1.23
ITGA6-209ENST00000470259 LGR6Q9HBX8 967 aa7.37□□□□□ -1.23
ITGA6-209ENST00000470259 FAM105AQ9NUU6 356 aa7.37□□□□□ -1.23
ITGA6-209ENST00000470259 KIAA1324LA8MWY0 1029 aaPredicted RBP7.36□□□□□ -1.23
ITGA6-209ENST00000470259 GSTP1P09211 210 aaKnown RBP7.36□□□□□ -1.23
ITGA6-209ENST00000470259 EZH1Q92800 747 aaPredicted RBP7.36□□□□□ -1.23
ITGA6-209ENST00000470259 PRKAG2Q9UGJ0 569 aa7.36□□□□□ -1.23
ITGA6-209ENST00000470259 DAGLAQ9Y4D2 1042 aa7.36□□□□□ -1.23
ITGA6-209ENST00000470259 HOXA10P31260 410 aaPredicted RBP7.35□□□□□ -1.23
ITGA6-209ENST00000470259 ADMP35318 185 aa7.35□□□□□ -1.23
ITGA6-209ENST00000470259 ATP2B2Q01814 1243 aa7.35□□□□□ -1.23
ITGA6-209ENST00000470259 DUSP27Q5VZP5 1158 aa7.35□□□□□ -1.23
ITGA6-209ENST00000470259 ZAR1Q86SH2 424 aa7.35□□□□□ -1.23
ITGA6-209ENST00000470259 SHISA5Q8N114 240 aa7.35□□□□□ -1.23
ITGA6-209ENST00000470259 WDR89Q96FK6 387 aaPredicted RBP7.35□□□□□ -1.23
ITGA6-209ENST00000470259 ASB16Q96NS5 453 aa7.35□□□□□ -1.23
ITGA6-209ENST00000470259 METTL22Q9BUU2 404 aaPredicted RBP7.35□□□□□ -1.23
ITGA6-209ENST00000470259 SEMA6CQ9H3T2 930 aa7.35□□□□□ -1.23
ITGA6-209ENST00000470259 PIDD1Q9HB75 910 aa7.35□□□□□ -1.23
ITGA6-209ENST00000470259 PPP1R9AQ9ULJ8 1098 aa7.35□□□□□ -1.23
ITGA6-209ENST00000470259 PATL2C9JE40 543 aaKnown RBP7.34□□□□□ -1.23
ITGA6-209ENST00000470259 TRAIPQ9BWF2 469 aa7.34□□□□□ -1.23
ITGA6-209ENST00000470259 ACSS3Q9H6R3 686 aa7.34□□□□□ -1.23
ITGA6-209ENST00000470259 CBX8Q9HC52 389 aa7.34□□□□□ -1.23
ITGA6-209ENST00000470259 FAM170BA6NMN3 283 aa7.33□□□□□ -1.24
ITGA6-209ENST00000470259 CYP26A1O43174 497 aa7.33□□□□□ -1.24
ITGA6-209ENST00000470259 WNT11O96014 354 aa7.33□□□□□ -1.24
ITGA6-209ENST00000470259 FOSL1P15407 271 aa7.33□□□□□ -1.24
ITGA6-209ENST00000470259 SPINK2P20155 84 aa7.33□□□□□ -1.24
ITGA6-209ENST00000470259 GP2P55259 537 aaKnown RBP7.33□□□□□ -1.24
ITGA6-209ENST00000470259 ID3Q02535 119 aa7.33□□□□□ -1.24
ITGA6-209ENST00000470259 CPSF6Q16630 551 aaKnown RBP eCLIP7.33□□□□□ -1.24
ITGA6-209ENST00000470259 ALG1LQ6GMV1 187 aa7.33□□□□□ -1.24
ITGA6-209ENST00000470259 DTX1Q86Y01 620 aa7.33□□□□□ -1.24
ITGA6-209ENST00000470259 SULF2Q8IWU5 870 aa7.33□□□□□ -1.24
ITGA6-209ENST00000470259 FBF1Q8TES7 1133 aa7.33□□□□□ -1.24
ITGA6-209ENST00000470259 SETDB2Q96T68 719 aa7.33□□□□□ -1.24
ITGA6-209ENST00000470259 ATXN3LQ9H3M9 355 aa7.33□□□□□ -1.24
ITGA6-209ENST00000470259 KRT82Q9NSB4 513 aa7.33□□□□□ -1.24
ITGA6-209ENST00000470259 SYNGAP1Q96PV0 1343 aa7.32□□□□□ -1.24
ITGA6-209ENST00000470259 TMPRSS2O15393 492 aa7.32□□□□□ -1.24
ITGA6-209ENST00000470259 ZNF862O60290 1169 aa7.32□□□□□ -1.24
ITGA6-209ENST00000470259 RNGTTO60942 597 aaKnown RBP7.32□□□□□ -1.24
ITGA6-209ENST00000470259 ARNTP27540 789 aa7.32□□□□□ -1.24
ITGA6-209ENST00000470259 GSTT1P30711 240 aa7.32□□□□□ -1.24
ITGA6-209ENST00000470259 CYP27A1Q02318 531 aa7.32□□□□□ -1.24
ITGA6-209ENST00000470259 FMR1Q06787 632 aaKnown RBP eCLIP7.32□□□□□ -1.24
ITGA6-209ENST00000470259 TPTE2Q6XPS3 522 aa7.32□□□□□ -1.24
ITGA6-209ENST00000470259 PSMG3-AS1Q96PY0 264 aa7.32□□□□□ -1.24
ITGA6-209ENST00000470259 EMILIN2Q9BXX0 1053 aa7.32□□□□□ -1.24
ITGA6-209ENST00000470259 LRRC4CQ9HCJ2 640 aa7.32□□□□□ -1.24
ITGA6-209ENST00000470259 WWC3Q9ULE0 1092 aa7.32□□□□□ -1.24
ITGA6-209ENST00000470259 IRAK1P51617 712 aa7.31□□□□□ -1.24
ITGA6-209ENST00000470259 MAP1SQ66K74 1059 aaPredicted RBP7.31□□□□□ -1.24
ITGA6-209ENST00000470259 ACSBG1Q96GR2 724 aa7.31□□□□□ -1.24
ITGA6-209ENST00000470259 FANCD2OSQ96PS1 177 aa7.31□□□□□ -1.24
ITGA6-209ENST00000470259 SRCIN1Q9C0H9 1055 aa7.31□□□□□ -1.24
ITGA6-209ENST00000470259 GSX1Q9H4S2 264 aaPredicted RBP7.31□□□□□ -1.24
ITGA6-209ENST00000470259 CRIM1Q9NZV1 1036 aa7.31□□□□□ -1.24
ITGA6-209ENST00000470259 ANGEL1Q9UNK9 670 aaKnown RBP7.31□□□□□ -1.24
ITGA6-209ENST00000470259 DYNC1LI2O43237 492 aaPredicted RBP7.3□□□□□ -1.24
ITGA6-209ENST00000470259 ADAMTS4O75173 837 aa7.3□□□□□ -1.24
ITGA6-209ENST00000470259 NME2P22392 152 aa7.3□□□□□ -1.24
ITGA6-209ENST00000470259 KIF4BQ2VIQ3 1234 aa7.3□□□□□ -1.24
ITGA6-209ENST00000470259 AEBP1Q8IUX7 1158 aa7.3□□□□□ -1.24
ITGA6-209ENST00000470259 STK35Q8TDR2 534 aa7.3□□□□□ -1.24
ITGA6-209ENST00000470259 OSBPL7Q9BZF2 842 aa7.3□□□□□ -1.24
ITGA6-209ENST00000470259 CEP44Q9C0F1 390 aa7.3□□□□□ -1.24
ITGA6-209ENST00000470259 SSU72Q9NP77 194 aaKnown RBP7.3□□□□□ -1.24
ITGA6-209ENST00000470259 SPG7Q9UQ90 795 aa7.3□□□□□ -1.24
ITGA6-209ENST00000470259 SAMM50Q9Y512 469 aa7.3□□□□□ -1.24
ITGA6-209ENST00000470259 OAS3Q9Y6K5 1087 aaKnown RBP7.3□□□□□ -1.24
ITGA6-209ENST00000470259 GIPC1O14908 333 aa7.29□□□□□ -1.24
ITGA6-209ENST00000470259 FBXO24O75426 580 aa7.29□□□□□ -1.24
ITGA6-209ENST00000470259 HCLS1P14317 486 aaPredicted RBP7.29□□□□□ -1.24
ITGA6-209ENST00000470259 ZNF765Q7L2R6 523 aa7.29□□□□□ -1.24
ITGA6-209ENST00000470259 PDZD3Q86UT5 571 aa7.29□□□□□ -1.24
ITGA6-209ENST00000470259 SMYD4Q8IYR2 804 aaPredicted RBP7.29□□□□□ -1.24
ITGA6-209ENST00000470259 C3orf58Q8NDZ4 430 aa7.29□□□□□ -1.24
ITGA6-209ENST00000470259 GATA6Q92908 595 aa7.29□□□□□ -1.24
ITGA6-209ENST00000470259 DISC1Q9NRI5 854 aa7.29□□□□□ -1.24
ITGA6-209ENST00000470259 C1GALT1Q9NS00 363 aa7.29□□□□□ -1.24
ITGA6-209ENST00000470259 LDHBP07195 334 aaKnown RBP7.28□□□□□ -1.24
ITGA6-209ENST00000470259 P4HBP07237 508 aaKnown RBP7.28□□□□□ -1.24
ITGA6-209ENST00000470259 TTLL4Q14679 1199 aa7.28□□□□□ -1.24
ITGA6-209ENST00000470259 NECAB3Q96P71 396 aaPredicted RBP7.28□□□□□ -1.24
ITGA6-209ENST00000470259 PDIA4P13667 645 aaKnown RBP7.27□□□□□ -1.25
ITGA6-209ENST00000470259 CDK5R2Q13319 367 aa7.27□□□□□ -1.25
ITGA6-209ENST00000470259 MSMPQ1L6U9 139 aa7.27□□□□□ -1.25
ITGA6-209ENST00000470259 CYP27C1Q4G0S4 372 aa7.27□□□□□ -1.25
ITGA6-209ENST00000470259 OGFOD3Q6PK18 319 aa7.27□□□□□ -1.25
ITGA6-209ENST00000470259 SEZ6L2Q6UXD5 910 aa7.27□□□□□ -1.25
ITGA6-209ENST00000470259 GPBAR1Q8TDU6 330 aa7.27□□□□□ -1.25
ITGA6-209ENST00000470259 PICK1Q9NRD5 415 aa7.27□□□□□ -1.25
ITGA6-209ENST00000470259 PPM1HQ9ULR3 514 aa7.27□□□□□ -1.25
ITGA6-209ENST00000470259 MCTP1Q6DN14 999 aa7.26□□□□□ -1.25
ITGA6-209ENST00000470259 GRIN3AQ8TCU5 1115 aa7.26□□□□□ -1.25
ITGA6-209ENST00000470259 C12orf49Q9H741 205 aa7.26□□□□□ -1.25
ITGA6-209ENST00000470259 BSDC1Q9NW68 430 aaPredicted RBP7.26□□□□□ -1.25
ITGA6-209ENST00000470259 CCDC39Q9UFE4 941 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms