RNA–Protein interactions for RNA: ENST00000470252.1

SFXN3-205, Transcript of sideroflexin 3, humanhuman

TSL 2

Gene SFXN3, Length 2,541 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-205ENST00000470252 JMYQ8N9B5 988 aa15.17■□□□□ 0.02
SFXN3-205ENST00000470252 CCDC191Q8NCU4 936 aa15.17■□□□□ 0.02
SFXN3-205ENST00000470252 BBXQ8WY36 941 aaPredicted RBP15.17■□□□□ 0.02
SFXN3-205ENST00000470252 TMX1Q9H3N1 280 aa15.17■□□□□ 0.02
SFXN3-205ENST00000470252 HPSEQ9Y251 543 aa15.17■□□□□ 0.02
SFXN3-205ENST00000470252 GPAA1O43292 621 aa15.16■□□□□ 0.02
SFXN3-205ENST00000470252 PPP6R2O75170 966 aa15.16■□□□□ 0.02
SFXN3-205ENST00000470252 RXRAP19793 462 aa15.16■□□□□ 0.02
SFXN3-205ENST00000470252 ZAP70P43403 619 aa15.16■□□□□ 0.02
SFXN3-205ENST00000470252 TMCO3Q6UWJ1 677 aa15.16■□□□□ 0.02
SFXN3-205ENST00000470252 VSTM4Q8IW00 320 aa15.16■□□□□ 0.02
SFXN3-205ENST00000470252 REXO1L1PQ8IX06 675 aa15.16■□□□□ 0.02
SFXN3-205ENST00000470252 CLIC6Q96NY7 704 aa15.16■□□□□ 0.02
SFXN3-205ENST00000470252 ATG3Q9NT62 314 aa15.16■□□□□ 0.02
SFXN3-205ENST00000470252 ALS2Q96Q42 1657 aa15.16■□□□□ 0.02
SFXN3-205ENST00000470252 CPDO75976 1380 aa15.16■□□□□ 0.02
SFXN3-205ENST00000470252 PKD1L3Q7Z443 1732 aa15.16■□□□□ 0.02
SFXN3-205ENST00000470252 ZMYM6O95789 1325 aa15.16■□□□□ 0.02
SFXN3-205ENST00000470252 FANCGO15287 622 aa15.16■□□□□ 0.02
SFXN3-205ENST00000470252 METAP2P50579 478 aaKnown RBP eCLIP15.16■□□□□ 0.02
SFXN3-205ENST00000470252 CCDC57Q2TAC2 916 aa15.16■□□□□ 0.02
SFXN3-205ENST00000470252 KRT40Q6A162 431 aa15.16■□□□□ 0.02
SFXN3-205ENST00000470252 PI16Q6UXB8 463 aa15.16■□□□□ 0.02
SFXN3-205ENST00000470252 FAM177A1Q8N128 213 aaPredicted RBP15.16■□□□□ 0.02
SFXN3-205ENST00000470252 CARD6Q9BX69 1037 aa15.16■□□□□ 0.02
SFXN3-205ENST00000470252 SRRTQ9BXP5 876 aaKnown RBP15.16■□□□□ 0.02
SFXN3-205ENST00000470252 FANCLQ9NW38 375 aa15.16■□□□□ 0.02
SFXN3-205ENST00000470252 WDR19Q8NEZ3 1342 aa15.16■□□□□ 0.02
SFXN3-205ENST00000470252 A1BGP04217 495 aa15.15■□□□□ 0.02
SFXN3-205ENST00000470252 GTF2E1P29083 439 aaPredicted RBP15.15■□□□□ 0.02
SFXN3-205ENST00000470252 TRDNQ13061 729 aa15.15■□□□□ 0.02
SFXN3-205ENST00000470252 PTPAQ15257 358 aa15.15■□□□□ 0.02
SFXN3-205ENST00000470252 DENND2AQ9ULE3 1009 aa15.15■□□□□ 0.02
SFXN3-205ENST00000470252 AKAP2Q9Y2D5 859 aa15.15■□□□□ 0.02
SFXN3-205ENST00000470252 ZSCAN12O43309 604 aa15.15■□□□□ 0.02
SFXN3-205ENST00000470252 PLA2G4AP47712 749 aa15.15■□□□□ 0.02
SFXN3-205ENST00000470252 FAM193AP78312 1265 aa15.15■□□□□ 0.02
SFXN3-205ENST00000470252 METTL16Q86W50 562 aaKnown RBP15.15■□□□□ 0.02
SFXN3-205ENST00000470252 PHKBQ93100 1093 aa15.15■□□□□ 0.02
SFXN3-205ENST00000470252 CCDC85AQ96PX6 553 aaPredicted RBP15.15■□□□□ 0.02
SFXN3-205ENST00000470252 ANGEL1Q9UNK9 670 aaKnown RBP15.15■□□□□ 0.02
SFXN3-205ENST00000470252 COL18A1P39060 1754 aa15.15■□□□□ 0.02
SFXN3-205ENST00000470252 TADA3O75528 432 aa15.14■□□□□ 0.01
SFXN3-205ENST00000470252 ZRANB2O95218 330 aaKnown RBP eCLIP15.14■□□□□ 0.01
SFXN3-205ENST00000470252 RESP18Q5W5W9 173 aa15.14■□□□□ 0.01
SFXN3-205ENST00000470252 PARP3Q9Y6F1 533 aa15.14■□□□□ 0.01
SFXN3-205ENST00000470252 MYO5AQ9Y4I1 1855 aaKnown RBP15.14■□□□□ 0.01
SFXN3-205ENST00000470252 CDKL5O76039 1030 aa15.14■□□□□ 0.01
SFXN3-205ENST00000470252 CHRNA2Q15822 529 aa15.14■□□□□ 0.01
SFXN3-205ENST00000470252 LONRF3Q496Y0 759 aa15.14■□□□□ 0.01
SFXN3-205ENST00000470252 HSP90AA4PQ58FG1 418 aa15.14■□□□□ 0.01
SFXN3-205ENST00000470252 CYB5R4Q7L1T6 521 aa15.14■□□□□ 0.01
SFXN3-205ENST00000470252 FCHSD1Q86WN1 690 aa15.14■□□□□ 0.01
SFXN3-205ENST00000470252 CREBRFQ8IUR6 639 aa15.14■□□□□ 0.01
SFXN3-205ENST00000470252 CNNM3Q8NE01 707 aa15.14■□□□□ 0.01
SFXN3-205ENST00000470252 MAP3K14Q99558 947 aa15.14■□□□□ 0.01
SFXN3-205ENST00000470252 PPP2R2CQ9Y2T4 447 aa15.14■□□□□ 0.01
SFXN3-205ENST00000470252 EFCAB8A8MWE9 144 aa15.13■□□□□ 0.01
SFXN3-205ENST00000470252 CCDC102BQ68D86 513 aa15.13■□□□□ 0.01
SFXN3-205ENST00000470252 MICU3Q86XE3 530 aa15.13■□□□□ 0.01
SFXN3-205ENST00000470252 NBPF3Q9H094 633 aa15.13■□□□□ 0.01
SFXN3-205ENST00000470252 PCDHA5Q9Y5H7 936 aa15.13■□□□□ 0.01
SFXN3-205ENST00000470252 VWA3AA6NCI4 1184 aa15.13■□□□□ 0.01
SFXN3-205ENST00000470252 ARHGAP6O43182 974 aa15.13■□□□□ 0.01
SFXN3-205ENST00000470252 SEC31AO94979 1220 aaKnown RBP15.13■□□□□ 0.01
SFXN3-205ENST00000470252 CDC27P30260 824 aa15.13■□□□□ 0.01
SFXN3-205ENST00000470252 TAF7LQ5H9L4 462 aa15.13■□□□□ 0.01
SFXN3-205ENST00000470252 CPLX2Q6PUV4 134 aaKnown RBP15.13■□□□□ 0.01
SFXN3-205ENST00000470252 KRBA2Q6ZNG9 492 aa15.13■□□□□ 0.01
SFXN3-205ENST00000470252 TMEM139Q8IV31 216 aa15.13■□□□□ 0.01
SFXN3-205ENST00000470252 FOXP4Q8IVH2 680 aaPredicted RBP15.13■□□□□ 0.01
SFXN3-205ENST00000470252 PDILTQ8N807 584 aa15.13■□□□□ 0.01
SFXN3-205ENST00000470252 RGS22Q8NE09 1264 aa15.13■□□□□ 0.01
SFXN3-205ENST00000470252 NKX2-3Q8TAU0 364 aa15.13■□□□□ 0.01
SFXN3-205ENST00000470252 KCNH3Q9ULD8 1083 aa15.13■□□□□ 0.01
SFXN3-205ENST00000470252 AKAP11Q9UKA4 1901 aa15.12■□□□□ 0.01
SFXN3-205ENST00000470252 FAM237AA0A1B0GTK4 181 aa15.12■□□□□ 0.01
SFXN3-205ENST00000470252 MYO1BO43795 1136 aa15.12■□□□□ 0.01
SFXN3-205ENST00000470252 CUTAO60888 179 aa15.12■□□□□ 0.01
SFXN3-205ENST00000470252 PDE4BQ07343 736 aa15.12■□□□□ 0.01
SFXN3-205ENST00000470252 TRIM29Q14134 588 aa15.12■□□□□ 0.01
SFXN3-205ENST00000470252 TBC1D10CQ8IV04 446 aa15.12■□□□□ 0.01
SFXN3-205ENST00000470252 C19orf44Q9H6X5 657 aa15.12■□□□□ 0.01
SFXN3-205ENST00000470252 INTS13Q9NVM9 706 aa15.12■□□□□ 0.01
SFXN3-205ENST00000470252 C1orf167Q5SNV9 1468 aa15.12■□□□□ 0.01
SFXN3-205ENST00000470252 SH2B2O14492 632 aaPredicted RBP15.12■□□□□ 0.01
SFXN3-205ENST00000470252 FOXN1O15353 648 aa15.12■□□□□ 0.01
SFXN3-205ENST00000470252 APPP05067 770 aa15.12■□□□□ 0.01
SFXN3-205ENST00000470252 TPM1P09493 284 aa15.12■□□□□ 0.01
SFXN3-205ENST00000470252 CYP2C19P33261 490 aa15.12■□□□□ 0.01
SFXN3-205ENST00000470252 APOA5Q6Q788 366 aa15.12■□□□□ 0.01
SFXN3-205ENST00000470252 CABLES1Q8TDN4 633 aa15.12■□□□□ 0.01
SFXN3-205ENST00000470252 BAG1Q99933 345 aaPredicted RBP15.12■□□□□ 0.01
SFXN3-205ENST00000470252 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.12■□□□□ 0.01
SFXN3-205ENST00000470252 SENP2Q9HC62 589 aa15.12■□□□□ 0.01
SFXN3-205ENST00000470252 CASQ1P31415 396 aa15.11■□□□□ 0.01
SFXN3-205ENST00000470252 SPECC1Q5M775 1068 aa15.11■□□□□ 0.01
SFXN3-205ENST00000470252 PROSER2Q86WR7 435 aaPredicted RBP15.11■□□□□ 0.01
SFXN3-205ENST00000470252 EPC1Q9H2F5 836 aa15.11■□□□□ 0.01
SFXN3-205ENST00000470252 B4E1Z4 1266 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms