RNA–Protein interactions for RNA: ENST00000470188.5

CDHR3-207, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 2,199 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-207ENST00000470188 BRAPQ7Z569 592 aa23.38■■□□□ 1.33
CDHR3-207ENST00000470188 ENGASEQ8NFI3 743 aa23.38■■□□□ 1.33
CDHR3-207ENST00000470188 TDRD7Q8NHU6 1098 aaKnown RBP23.38■■□□□ 1.33
CDHR3-207ENST00000470188 NEDD4P46934 1319 aa23.38■■□□□ 1.33
CDHR3-207ENST00000470188 POLR3DP05423 398 aaPredicted RBP23.37■■□□□ 1.33
CDHR3-207ENST00000470188 TMEM87BQ96K49 555 aa23.37■■□□□ 1.33
CDHR3-207ENST00000470188 NAPBQ9H115 298 aa23.37■■□□□ 1.33
CDHR3-207ENST00000470188 PCDHA7Q9UN72 937 aa23.37■■□□□ 1.33
CDHR3-207ENST00000470188 IFNL3Q8IZI9 196 aa23.37■■□□□ 1.33
CDHR3-207ENST00000470188 EPB41L4AQ9HCS5 686 aaPredicted RBP23.37■■□□□ 1.33
CDHR3-207ENST00000470188 SPATA31A5Q5VU36 1347 aa23.36■■□□□ 1.33
CDHR3-207ENST00000470188 SPATA31A7Q8IWB4 1347 aa23.36■■□□□ 1.33
CDHR3-207ENST00000470188 LINC00301Q8NCQ3 95 aa23.36■■□□□ 1.33
CDHR3-207ENST00000470188 MRPS27Q92552 414 aaKnown RBP23.36■■□□□ 1.33
CDHR3-207ENST00000470188 GJB4Q9NTQ9 266 aa23.36■■□□□ 1.33
CDHR3-207ENST00000470188 C4AP0C0L4 1744 aa23.36■■□□□ 1.33
CDHR3-207ENST00000470188 C4BP0C0L5 1744 aa23.36■■□□□ 1.33
CDHR3-207ENST00000470188 CDKL5O76039 1030 aa23.35■■□□□ 1.33
CDHR3-207ENST00000470188 BCAMP50895 628 aa23.35■■□□□ 1.33
CDHR3-207ENST00000470188 STK38Q15208 465 aa23.35■■□□□ 1.33
CDHR3-207ENST00000470188 ADALQ6DHV7 355 aa23.35■■□□□ 1.33
CDHR3-207ENST00000470188 APOA5Q6Q788 366 aa23.35■■□□□ 1.33
CDHR3-207ENST00000470188 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.35■■□□□ 1.33
CDHR3-207ENST00000470188 ARMT1Q9H993 441 aa23.35■■□□□ 1.33
CDHR3-207ENST00000470188 POLR3EQ9NVU0 708 aa23.35■■□□□ 1.33
CDHR3-207ENST00000470188 CLIC4Q9Y696 253 aa23.35■■□□□ 1.33
CDHR3-207ENST00000470188 YEATS4O95619 227 aa23.35■■□□□ 1.33
CDHR3-207ENST00000470188 SF3A1Q15459 793 aaKnown RBP23.35■■□□□ 1.33
CDHR3-207ENST00000470188 STX1AQ16623 288 aa23.35■■□□□ 1.33
CDHR3-207ENST00000470188 MYSM1Q5VVJ2 828 aa23.35■■□□□ 1.33
CDHR3-207ENST00000470188 KCNG4Q8TDN1 519 aa23.35■■□□□ 1.33
CDHR3-207ENST00000470188 DOCK2Q92608 1830 aa23.35■■□□□ 1.33
CDHR3-207ENST00000470188 KIF23Q02241 960 aaPredicted RBP23.34■■□□□ 1.33
CDHR3-207ENST00000470188 CPLX2Q6PUV4 134 aaKnown RBP23.34■■□□□ 1.33
CDHR3-207ENST00000470188 RGS22Q8NE09 1264 aa23.34■■□□□ 1.33
CDHR3-207ENST00000470188 IGDCC4Q8TDY8 1250 aa23.34■■□□□ 1.33
CDHR3-207ENST00000470188 ZNF652Q9Y2D9 606 aa23.34■■□□□ 1.33
CDHR3-207ENST00000470188 CICQ96RK0 1608 aaPredicted RBP23.34■■□□□ 1.33
CDHR3-207ENST00000470188 A0A1W2PQ27 194 aa23.34■■□□□ 1.33
CDHR3-207ENST00000470188 A0A1W2PQ64 194 aa23.34■■□□□ 1.33
CDHR3-207ENST00000470188 A0A1W2PQD8 194 aa23.34■■□□□ 1.33
CDHR3-207ENST00000470188 NUTM2BA6NNL0 878 aaPredicted RBP23.34■■□□□ 1.33
CDHR3-207ENST00000470188 NUTM2EB1AL46 878 aaPredicted RBP23.34■■□□□ 1.33
CDHR3-207ENST00000470188 RXRAP19793 462 aa23.34■■□□□ 1.33
CDHR3-207ENST00000470188 PTGS1P23219 599 aa23.34■■□□□ 1.33
CDHR3-207ENST00000470188 CHRNDQ07001 517 aa23.34■■□□□ 1.33
CDHR3-207ENST00000470188 NFXL1Q6ZNB6 911 aa23.34■■□□□ 1.33
CDHR3-207ENST00000470188 NUTM2AQ8IVF1 878 aaPredicted RBP23.34■■□□□ 1.33
CDHR3-207ENST00000470188 SENP2Q9HC62 589 aa23.34■■□□□ 1.33
CDHR3-207ENST00000470188 MYH14Q7Z406 1995 aaKnown RBP23.33■■□□□ 1.33
CDHR3-207ENST00000470188 SMTNL1A8MU46 457 aa23.33■■□□□ 1.33
CDHR3-207ENST00000470188 KIF28PB7ZC32 967 aa23.33■■□□□ 1.33
CDHR3-207ENST00000470188 ZBTB43O43298 467 aa23.33■■□□□ 1.33
CDHR3-207ENST00000470188 TMEM67Q5HYA8 995 aa23.33■■□□□ 1.33
CDHR3-207ENST00000470188 MICU3Q86XE3 530 aa23.33■■□□□ 1.33
CDHR3-207ENST00000470188 SMARCC1Q92922 1105 aaPredicted RBP23.33■■□□□ 1.33
CDHR3-207ENST00000470188 LY9Q9HBG7 655 aa23.33■■□□□ 1.33
CDHR3-207ENST00000470188 CTDSPL2Q05D32 466 aa23.33■■□□□ 1.32
CDHR3-207ENST00000470188 SYNE3Q6ZMZ3 975 aa23.33■■□□□ 1.32
CDHR3-207ENST00000470188 BARGINQ6ZT62 677 aa23.33■■□□□ 1.32
CDHR3-207ENST00000470188 FMR1NBQ8N0W7 255 aaPredicted RBP23.33■■□□□ 1.32
CDHR3-207ENST00000470188 ALG1Q9BT22 464 aa23.33■■□□□ 1.32
CDHR3-207ENST00000470188 TRIM5Q9C035 493 aa23.33■■□□□ 1.32
CDHR3-207ENST00000470188 INCENPQ9NQS7 918 aa23.33■■□□□ 1.32
CDHR3-207ENST00000470188 GSG1L2A8MUP6 293 aa23.32■■□□□ 1.32
CDHR3-207ENST00000470188 SPTLC2O15270 562 aa23.32■■□□□ 1.32
CDHR3-207ENST00000470188 CDC27P30260 824 aa23.32■■□□□ 1.32
CDHR3-207ENST00000470188 LAMB2P55268 1798 aa23.32■■□□□ 1.32
CDHR3-207ENST00000470188 SGMS1Q86VZ5 419 aa23.32■■□□□ 1.32
CDHR3-207ENST00000470188 CNNM2Q9H8M5 875 aa23.32■■□□□ 1.32
CDHR3-207ENST00000470188 GNAT2P19087 354 aa23.31■■□□□ 1.32
CDHR3-207ENST00000470188 ZNF75DP51815 510 aa23.31■■□□□ 1.32
CDHR3-207ENST00000470188 C11orf57Q6ZUT1 292 aaPredicted RBP23.31■■□□□ 1.32
CDHR3-207ENST00000470188 PLA2G4DQ86XP0 818 aa23.31■■□□□ 1.32
CDHR3-207ENST00000470188 AIFM3Q96NN9 605 aa23.31■■□□□ 1.32
CDHR3-207ENST00000470188 CDC5LQ99459 802 aaKnown RBP23.31■■□□□ 1.32
CDHR3-207ENST00000470188 OGFRQ9NZT2 677 aa23.31■■□□□ 1.32
CDHR3-207ENST00000470188 PNPLA7Q6ZV29 1317 aa23.31■■□□□ 1.32
CDHR3-207ENST00000470188 A0A1B0GVL5 298 aa23.31■■□□□ 1.32
CDHR3-207ENST00000470188 AKNAD1Q5T1N1 836 aa23.31■■□□□ 1.32
CDHR3-207ENST00000470188 CCDC144CPQ8IYA2 1237 aa23.31■■□□□ 1.32
CDHR3-207ENST00000470188 LCORLQ8N3X6 602 aa23.31■■□□□ 1.32
CDHR3-207ENST00000470188 NACAP1Q9BZK3 213 aa23.31■■□□□ 1.32
CDHR3-207ENST00000470188 ZSWIM5Q9P217 1185 aa23.31■■□□□ 1.32
CDHR3-207ENST00000470188 PAXBP1Q9Y5B6 917 aa23.31■■□□□ 1.32
CDHR3-207ENST00000470188 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.3■■□□□ 1.32
CDHR3-207ENST00000470188 GOLGA8AA7E2F4 631 aa23.3■■□□□ 1.32
CDHR3-207ENST00000470188 GOLGA6L19H0YKK7 550 aa23.3■■□□□ 1.32
CDHR3-207ENST00000470188 KCNQ2O43526 872 aa23.3■■□□□ 1.32
CDHR3-207ENST00000470188 PRKAB2O43741 272 aa23.3■■□□□ 1.32
CDHR3-207ENST00000470188 U2AF2P26368 475 aaKnown RBP eCLIP23.3■■□□□ 1.322e-16■■□□□ 12.4
CDHR3-207ENST00000470188 LIFRP42702 1097 aa23.3■■□□□ 1.32
CDHR3-207ENST00000470188 IQCB1Q15051 598 aa23.3■■□□□ 1.32
CDHR3-207ENST00000470188 ANO1Q5XXA6 986 aa23.3■■□□□ 1.32
CDHR3-207ENST00000470188 CCDC186Q7Z3E2 898 aa23.3■■□□□ 1.32
CDHR3-207ENST00000470188 KRT23Q9C075 422 aa23.3■■□□□ 1.32
CDHR3-207ENST00000470188 LRP2BPQ9P2M1 347 aa23.3■■□□□ 1.32
CDHR3-207ENST00000470188 SLC4A4Q9Y6R1 1079 aa23.3■■□□□ 1.32
CDHR3-207ENST00000470188 SPDYE4A6NLX3 237 aa23.3■■□□□ 1.32
CDHR3-207ENST00000470188 IFIT3O14879 490 aaKnown RBP23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms