RNA–Protein interactions for RNA: ENST00000470067.5

CUL4A-206, Transcript of cullin 4A, humanhuman

TSL 2

Gene CUL4A, Length 794 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-206ENST00000470067 SCN11AQ9UI33 1791 aa11.51□□□□□ -0.57
CUL4A-206ENST00000470067 TM4SF1P30408 202 aa11.5□□□□□ -0.57
CUL4A-206ENST00000470067 NOS2P35228 1153 aa11.5□□□□□ -0.57
CUL4A-206ENST00000470067 MTHFSP49914 203 aa11.5□□□□□ -0.57
CUL4A-206ENST00000470067 CABP4P57796 275 aa11.5□□□□□ -0.57
CUL4A-206ENST00000470067 LYSMD3Q7Z3D4 306 aa11.5□□□□□ -0.57
CUL4A-206ENST00000470067 MORC1Q86VD1 984 aa11.5□□□□□ -0.57
CUL4A-206ENST00000470067 PODXL2Q9NZ53 605 aa11.5□□□□□ -0.57
CUL4A-206ENST00000470067 USP3Q9Y6I4 520 aa11.5□□□□□ -0.57
CUL4A-206ENST00000470067 PRELPP51888 382 aa11.49□□□□□ -0.57
CUL4A-206ENST00000470067 TGFB2P61812 414 aa11.49□□□□□ -0.57
CUL4A-206ENST00000470067 SLC39A6Q13433 755 aa11.49□□□□□ -0.57
CUL4A-206ENST00000470067 FOXD4L5Q5VV16 416 aaPredicted RBP11.49□□□□□ -0.57
CUL4A-206ENST00000470067 TRIM46Q7Z4K8 759 aa11.49□□□□□ -0.57
CUL4A-206ENST00000470067 DNAJC10Q8IXB1 793 aa11.49□□□□□ -0.57
CUL4A-206ENST00000470067 NLGN1Q8N2Q7 840 aa11.49□□□□□ -0.57
CUL4A-206ENST00000470067 ZFP42Q96MM3 310 aa11.49□□□□□ -0.57
CUL4A-206ENST00000470067 BCS1LQ9Y276 419 aa11.49□□□□□ -0.57
CUL4A-206ENST00000470067 SPATA31C2B4DYI2 1134 aa11.48□□□□□ -0.57
CUL4A-206ENST00000470067 HSPA6P17066 643 aa11.48□□□□□ -0.57
CUL4A-206ENST00000470067 CHRNA5P30532 468 aa11.48□□□□□ -0.57
CUL4A-206ENST00000470067 SCNN1AP37088 669 aa11.48□□□□□ -0.57
CUL4A-206ENST00000470067 AMOTQ4VCS5 1084 aa11.48□□□□□ -0.57
CUL4A-206ENST00000470067 WDR44Q5JSH3 913 aa11.48□□□□□ -0.57
CUL4A-206ENST00000470067 PRICKLE2Q7Z3G6 844 aa11.48□□□□□ -0.57
CUL4A-206ENST00000470067 DNAJC5GQ8N7S2 189 aa11.48□□□□□ -0.57
CUL4A-206ENST00000470067 RNF217Q8TC41 542 aa11.48□□□□□ -0.57
CUL4A-206ENST00000470067 NMRK2Q9NPI5 230 aa11.48□□□□□ -0.57
CUL4A-206ENST00000470067 AAASQ9NRG9 546 aa11.48□□□□□ -0.57
CUL4A-206ENST00000470067 VIRMAQ69YN4 1812 aaKnown RBP11.47□□□□□ -0.57
CUL4A-206ENST00000470067 KIF7Q2M1P5 1343 aa11.47□□□□□ -0.57
CUL4A-206ENST00000470067 USP42Q9H9J4 1324 aaKnown RBP11.47□□□□□ -0.57
CUL4A-206ENST00000470067 ABL1P00519 1130 aa11.47□□□□□ -0.57
CUL4A-206ENST00000470067 HSP90AB1P08238 724 aaKnown RBP11.47□□□□□ -0.57
CUL4A-206ENST00000470067 CYP19A1P11511 503 aaPredicted RBP11.47□□□□□ -0.57
CUL4A-206ENST00000470067 HMGB2P26583 209 aaKnown RBP11.47□□□□□ -0.57
CUL4A-206ENST00000470067 RFC4P35249 363 aa11.47□□□□□ -0.57
CUL4A-206ENST00000470067 HIRAP54198 1017 aaPredicted RBP11.47□□□□□ -0.57
CUL4A-206ENST00000470067 NAA30Q147X3 362 aaPredicted RBP11.47□□□□□ -0.57
CUL4A-206ENST00000470067 ARHGAP27Q6ZUM4 889 aa11.47□□□□□ -0.57
CUL4A-206ENST00000470067 SBF1O95248 1867 aa11.46□□□□□ -0.57
CUL4A-206ENST00000470067 KCPQ6ZWJ8 1503 aa11.46□□□□□ -0.57
CUL4A-206ENST00000470067 POLRMTO00411 1230 aaKnown RBP11.46□□□□□ -0.57
CUL4A-206ENST00000470067 EML1O00423 815 aa11.46□□□□□ -0.57
CUL4A-206ENST00000470067 RNMTO43148 476 aaKnown RBP11.46□□□□□ -0.57
CUL4A-206ENST00000470067 HMOX1P09601 288 aa11.46□□□□□ -0.57
CUL4A-206ENST00000470067 POU4F2Q12837 409 aa11.46□□□□□ -0.57
CUL4A-206ENST00000470067 MTHFSDQ2M296 383 aaKnown RBP11.46□□□□□ -0.57
CUL4A-206ENST00000470067 C4orf17Q53FE4 359 aa11.46□□□□□ -0.57
CUL4A-206ENST00000470067 GTF3C2Q8WUA4 911 aaPredicted RBP11.46□□□□□ -0.57
CUL4A-206ENST00000470067 SLC52A2Q9HAB3 445 aa11.46□□□□□ -0.57
CUL4A-206ENST00000470067 ATP13A2Q9NQ11 1180 aa11.46□□□□□ -0.57
CUL4A-206ENST00000470067 SEPT3Q9UH03 358 aa11.46□□□□□ -0.57
CUL4A-206ENST00000470067 EGFL7Q9UHF1 273 aa11.46□□□□□ -0.57
CUL4A-206ENST00000470067 PARP3Q9Y6F1 533 aa11.46□□□□□ -0.57
CUL4A-206ENST00000470067 ARFGEF1Q9Y6D6 1849 aa11.46□□□□□ -0.58
CUL4A-206ENST00000470067 SOS1Q07889 1333 aaPredicted RBP11.45□□□□□ -0.58
CUL4A-206ENST00000470067 AFDNP55196 1824 aaKnown RBP11.45□□□□□ -0.58
CUL4A-206ENST00000470067 FIGNL2A6NMB9 653 aa11.45□□□□□ -0.58
CUL4A-206ENST00000470067 ST8SIA5O15466 376 aa11.45□□□□□ -0.58
CUL4A-206ENST00000470067 PLA2G4AP47712 749 aa11.45□□□□□ -0.58
CUL4A-206ENST00000470067 SERPINB4P48594 390 aa11.45□□□□□ -0.58
CUL4A-206ENST00000470067 C16orf46Q6P387 395 aa11.45□□□□□ -0.58
CUL4A-206ENST00000470067 NBPF10Q6P3W6 841 aaKnown RBP11.45□□□□□ -0.58
CUL4A-206ENST00000470067 ZNF295-AS1Q8N0V1 137 aa11.45□□□□□ -0.58
CUL4A-206ENST00000470067 ZDHHC1Q8WTX9 485 aa11.45□□□□□ -0.58
CUL4A-206ENST00000470067 AIDAQ96BJ3 306 aa11.45□□□□□ -0.58
CUL4A-206ENST00000470067 HCN4Q9Y3Q4 1203 aa11.45□□□□□ -0.58
CUL4A-206ENST00000470067 MRC1P22897 1456 aa11.44□□□□□ -0.58
CUL4A-206ENST00000470067 PHKA2P46019 1235 aa11.44□□□□□ -0.58
CUL4A-206ENST00000470067 AKAP4Q5JQC9 854 aa11.44□□□□□ -0.58
CUL4A-206ENST00000470067 C1orf141Q5JVX7 400 aa11.44□□□□□ -0.58
CUL4A-206ENST00000470067 C9orf131Q5VYM1 1079 aa11.44□□□□□ -0.58
CUL4A-206ENST00000470067 USPL1Q5W0Q7 1092 aa11.44□□□□□ -0.58
CUL4A-206ENST00000470067 CCDC87Q9NVE4 849 aa11.44□□□□□ -0.58
CUL4A-206ENST00000470067 KNSTRNQ9Y448 316 aa11.44□□□□□ -0.58
CUL4A-206ENST00000470067 COL3A1P02461 1466 aaPredicted RBP11.44□□□□□ -0.58
CUL4A-206ENST00000470067 MAN1A2O60476 641 aa11.43□□□□□ -0.58
CUL4A-206ENST00000470067 HTRA3P83110 453 aa11.43□□□□□ -0.58
CUL4A-206ENST00000470067 NFIXQ14938 502 aa11.43□□□□□ -0.58
CUL4A-206ENST00000470067 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.43□□□□□ -0.58
CUL4A-206ENST00000470067 TMCO4Q5TGY1 634 aa11.43□□□□□ -0.58
CUL4A-206ENST00000470067 C1orf53Q5VUE5 145 aa11.43□□□□□ -0.58
CUL4A-206ENST00000470067 CAPN12Q6ZSI9 719 aa11.43□□□□□ -0.58
CUL4A-206ENST00000470067 ALDH16A1Q8IZ83 802 aa11.43□□□□□ -0.58
CUL4A-206ENST00000470067 IL17REQ8NFR9 667 aa11.43□□□□□ -0.58
CUL4A-206ENST00000470067 SENP2Q9HC62 589 aa11.43□□□□□ -0.58
CUL4A-206ENST00000470067 ZBTB1Q9Y2K1 713 aa11.43□□□□□ -0.58
CUL4A-206ENST00000470067 SND1Q7KZF4 910 aaKnown RBP eCLIP11.42□□□□□ -0.58
CUL4A-206ENST00000470067 TIMMDC1Q9NPL8 285 aa11.42□□□□□ -0.58
CUL4A-206ENST00000470067 NRXN2Q9P2S2 1712 aa11.42□□□□□ -0.58
CUL4A-206ENST00000470067 CARMIL3Q8ND23 1372 aa11.41□□□□□ -0.58
CUL4A-206ENST00000470067 UBR2Q8IWV8 1755 aa11.41□□□□□ -0.58
CUL4A-206ENST00000470067 SOWAHDA6NJG2 315 aa11.41□□□□□ -0.58
CUL4A-206ENST00000470067 KCNQ3O43525 872 aa11.41□□□□□ -0.58
CUL4A-206ENST00000470067 FKBP4Q02790 459 aaKnown RBP eCLIP11.41□□□□□ -0.58
CUL4A-206ENST00000470067 CC2D1BQ5T0F9 858 aaKnown RBP11.41□□□□□ -0.58
CUL4A-206ENST00000470067 HELQQ8TDG4 1101 aa11.41□□□□□ -0.58
CUL4A-206ENST00000470067 PHACTR1Q9C0D0 580 aa11.41□□□□□ -0.58
CUL4A-206ENST00000470067 ZDHHC3Q9NYG2 299 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms