RNA–Protein interactions for RNA: ENST00000469232.5

NPHP3-204, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,616 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-204ENST00000469232 RBM25P49756 843 aaKnown RBP9.83□□□□□ -0.84
NPHP3-204ENST00000469232 AOC3Q16853 763 aa9.83□□□□□ -0.84
NPHP3-204ENST00000469232 MCMDC2Q4G0Z9 681 aa9.83□□□□□ -0.84
NPHP3-204ENST00000469232 CERS5Q8N5B7 392 aa9.83□□□□□ -0.84
NPHP3-204ENST00000469232 TBC1D32Q96NH3 1257 aa9.83□□□□□ -0.84
NPHP3-204ENST00000469232 GMLQ99445 158 aa9.83□□□□□ -0.84
NPHP3-204ENST00000469232 PPP1R1BQ9UD71 204 aaPredicted RBP9.83□□□□□ -0.84
NPHP3-204ENST00000469232 BCS1LQ9Y276 419 aa9.83□□□□□ -0.84
NPHP3-204ENST00000469232 GAKO14976 1311 aa9.83□□□□□ -0.84
NPHP3-204ENST00000469232 MAST3O60307 1309 aa9.83□□□□□ -0.84
NPHP3-204ENST00000469232 DICER1Q9UPY3 1922 aaKnown RBP9.83□□□□□ -0.84
NPHP3-204ENST00000469232 FOXP2O15409 715 aa9.82□□□□□ -0.84
NPHP3-204ENST00000469232 PPIP5K2O43314 1243 aa9.82□□□□□ -0.84
NPHP3-204ENST00000469232 VIL1P09327 827 aaKnown RBP9.82□□□□□ -0.84
NPHP3-204ENST00000469232 PRDX5P30044 214 aa9.82□□□□□ -0.84
NPHP3-204ENST00000469232 PPP4CP60510 307 aa9.82□□□□□ -0.84
NPHP3-204ENST00000469232 HDLBPQ00341 1268 aaKnown RBP9.82□□□□□ -0.84
NPHP3-204ENST00000469232 GRIK5Q16478 980 aa9.82□□□□□ -0.84
NPHP3-204ENST00000469232 DOK7Q18PE1 504 aa9.82□□□□□ -0.84
NPHP3-204ENST00000469232 SLC9C2Q5TAH2 1124 aa9.82□□□□□ -0.84
NPHP3-204ENST00000469232 CWC27Q6UX04 472 aaKnown RBP9.82□□□□□ -0.84
NPHP3-204ENST00000469232 TMEM92Q6UXU6 159 aa9.82□□□□□ -0.84
NPHP3-204ENST00000469232 ERICH6Q7L0X2 663 aa9.82□□□□□ -0.84
NPHP3-204ENST00000469232 ZNF589Q86UQ0 364 aaPredicted RBP9.82□□□□□ -0.84
NPHP3-204ENST00000469232 MAP4K1Q92918 833 aa9.82□□□□□ -0.84
NPHP3-204ENST00000469232 TSHZ2Q9NRE2 1034 aa9.82□□□□□ -0.84
NPHP3-204ENST00000469232 ZNF277Q9NRM2 450 aaPredicted RBP9.82□□□□□ -0.84
NPHP3-204ENST00000469232 ZNRF3Q9ULT6 936 aa9.82□□□□□ -0.84
NPHP3-204ENST00000469232 ZNF532Q9HCE3 1301 aa9.82□□□□□ -0.84
NPHP3-204ENST00000469232 CCDC88AQ3V6T2 1871 aa9.82□□□□□ -0.84
NPHP3-204ENST00000469232 RPAP1Q9BWH6 1393 aaPredicted RBP9.82□□□□□ -0.84
NPHP3-204ENST00000469232 USP17L3A6NCW0 530 aa9.82□□□□□ -0.84
NPHP3-204ENST00000469232 USP17L4A6NCW7 530 aa9.82□□□□□ -0.84
NPHP3-204ENST00000469232 IDH1O75874 414 aaKnown RBP9.82□□□□□ -0.84
NPHP3-204ENST00000469232 MMP14P50281 582 aa9.82□□□□□ -0.84
NPHP3-204ENST00000469232 MECOMQ03112 1051 aa9.82□□□□□ -0.84
NPHP3-204ENST00000469232 ALX1Q15699 326 aa9.82□□□□□ -0.84
NPHP3-204ENST00000469232 TTLL5Q6EMB2 1281 aa9.82□□□□□ -0.84
NPHP3-204ENST00000469232 USP17L1Q7RTZ2 530 aa9.82□□□□□ -0.84
NPHP3-204ENST00000469232 SEC62Q99442 399 aaKnown RBP9.82□□□□□ -0.84
NPHP3-204ENST00000469232 RIOK1Q9BRS2 568 aaKnown RBP9.82□□□□□ -0.84
NPHP3-204ENST00000469232 DSCC1Q9BVC3 393 aa9.82□□□□□ -0.84
NPHP3-204ENST00000469232 PUS7LQ9H0K6 701 aaKnown RBP9.82□□□□□ -0.84
NPHP3-204ENST00000469232 DBNDD1Q9H9R9 158 aa9.82□□□□□ -0.84
NPHP3-204ENST00000469232 LRP2BPQ9P2M1 347 aa9.82□□□□□ -0.84
NPHP3-204ENST00000469232 ZMYM6O95789 1325 aa9.82□□□□□ -0.84
NPHP3-204ENST00000469232 CCDC171Q6TFL3 1326 aa9.82□□□□□ -0.84
NPHP3-204ENST00000469232 SBF1O95248 1867 aa9.81□□□□□ -0.84
NPHP3-204ENST00000469232 M0R2C6 588 aa9.81□□□□□ -0.84
NPHP3-204ENST00000469232 FZD9O00144 591 aa9.81□□□□□ -0.84
NPHP3-204ENST00000469232 FRAT2O75474 233 aaPredicted RBP9.81□□□□□ -0.84
NPHP3-204ENST00000469232 LDHBP07195 334 aaKnown RBP9.81□□□□□ -0.84
NPHP3-204ENST00000469232 YBX3P16989 372 aaKnown RBP eCLIP9.81□□□□□ -0.84
NPHP3-204ENST00000469232 MFAP1P55081 439 aaKnown RBP9.81□□□□□ -0.84
NPHP3-204ENST00000469232 GTF2IP78347 998 aa9.81□□□□□ -0.84
NPHP3-204ENST00000469232 CHAF1AQ13111 956 aaPredicted RBP9.81□□□□□ -0.84
NPHP3-204ENST00000469232 SLFNL1Q499Z3 407 aa9.81□□□□□ -0.84
NPHP3-204ENST00000469232 MFSD14BQ5SR56 506 aa9.81□□□□□ -0.84
NPHP3-204ENST00000469232 ADGRA1Q86SQ6 560 aa9.81□□□□□ -0.84
NPHP3-204ENST00000469232 CERS3Q8IU89 383 aa9.81□□□□□ -0.84
NPHP3-204ENST00000469232 LARGE2Q8N3Y3 721 aa9.81□□□□□ -0.84
NPHP3-204ENST00000469232 MAGEB6Q8N7X4 407 aa9.81□□□□□ -0.84
NPHP3-204ENST00000469232 STRBPQ96SI9 672 aaKnown RBP9.81□□□□□ -0.84
NPHP3-204ENST00000469232 KCNQ5Q9NR82 932 aa9.81□□□□□ -0.84
NPHP3-204ENST00000469232 MYO3BQ8WXR4 1341 aa9.81□□□□□ -0.84
NPHP3-204ENST00000469232 GPR75-ASB3A0A0A6YYF3 556 aa9.8□□□□□ -0.84
NPHP3-204ENST00000469232 GSTO1P78417 241 aa9.8□□□□□ -0.84
NPHP3-204ENST00000469232 NECTIN1Q15223 517 aa9.8□□□□□ -0.84
NPHP3-204ENST00000469232 TSGA10IPQ3SY00 556 aa9.8□□□□□ -0.84
NPHP3-204ENST00000469232 NAA16Q6N069 864 aaPredicted RBP9.8□□□□□ -0.84
NPHP3-204ENST00000469232 HHIPL2Q6UWX4 724 aa9.8□□□□□ -0.84
NPHP3-204ENST00000469232 ABCF2Q9UG63 623 aa9.8□□□□□ -0.84
NPHP3-204ENST00000469232 MROH7-TTC4A0A0A0MT08 1334 aa9.79□□□□□ -0.84
NPHP3-204ENST00000469232 GPAA1O43292 621 aa9.79□□□□□ -0.84
NPHP3-204ENST00000469232 LDHCP07864 332 aa9.79□□□□□ -0.84
NPHP3-204ENST00000469232 HSPD1P10809 573 aaKnown RBP9.79□□□□□ -0.84
NPHP3-204ENST00000469232 LMNB1P20700 586 aa9.79□□□□□ -0.84
NPHP3-204ENST00000469232 CYP7A1P22680 504 aa9.79□□□□□ -0.84
NPHP3-204ENST00000469232 HSPA4P34932 840 aa9.79□□□□□ -0.84
NPHP3-204ENST00000469232 ANAPC15P60006 121 aa9.79□□□□□ -0.84
NPHP3-204ENST00000469232 PTH1RQ03431 593 aa9.79□□□□□ -0.84
NPHP3-204ENST00000469232 CXCL9Q07325 125 aa9.79□□□□□ -0.84
NPHP3-204ENST00000469232 GIMAP6Q6P9H5 292 aa9.79□□□□□ -0.84
NPHP3-204ENST00000469232 NIM1KQ8IY84 436 aa9.79□□□□□ -0.84
NPHP3-204ENST00000469232 AGBL3Q8NEM8 1001 aa9.79□□□□□ -0.84
NPHP3-204ENST00000469232 IL27Q8NEV9 243 aa9.79□□□□□ -0.84
NPHP3-204ENST00000469232 KIF2CQ99661 725 aa9.79□□□□□ -0.84
NPHP3-204ENST00000469232 RAI14Q9P0K7 980 aa9.79□□□□□ -0.84
NPHP3-204ENST00000469232 GNAT2P19087 354 aa9.78□□□□□ -0.84
NPHP3-204ENST00000469232 RSBN1LQ6PCB5 846 aaPredicted RBP9.78□□□□□ -0.84
NPHP3-204ENST00000469232 SLF2Q8IX21 1173 aa9.78□□□□□ -0.84
NPHP3-204ENST00000469232 MTMR14Q8NCE2 650 aa9.78□□□□□ -0.84
NPHP3-204ENST00000469232 ZBED3Q96IU2 234 aaPredicted RBP9.78□□□□□ -0.84
NPHP3-204ENST00000469232 C22orf23Q9BZE7 217 aa9.78□□□□□ -0.84
NPHP3-204ENST00000469232 MKRN1Q9UHC7 482 aaKnown RBP9.78□□□□□ -0.84
NPHP3-204ENST00000469232 SERPINA10Q9UK55 444 aa9.78□□□□□ -0.84
NPHP3-204ENST00000469232 GOLGB1Q14789 3259 aaKnown RBP9.78□□□□□ -0.84
NPHP3-204ENST00000469232 MYH2Q9UKX2 1941 aa9.78□□□□□ -0.84
NPHP3-204ENST00000469232 ZC3H4Q9UPT8 1303 aaKnown RBP9.78□□□□□ -0.84
NPHP3-204ENST00000469232 PSMD14O00487 310 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms