RNA–Protein interactions for RNA: ENST00000468477.1

CDHR3-206, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 482 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-206ENST00000468477 RSPO4Q2I0M5 234 aaPredicted RBP4.76□□□□□ -1.65
CDHR3-206ENST00000468477 PDE12Q6L8Q7 609 aaKnown RBP4.76□□□□□ -1.65
CDHR3-206ENST00000468477 ALKBH2Q6NS38 261 aa4.76□□□□□ -1.65
CDHR3-206ENST00000468477 SHISA2Q6UWI4 295 aa4.76□□□□□ -1.65
CDHR3-206ENST00000468477 TMC7Q7Z402 723 aa4.76□□□□□ -1.65
CDHR3-206ENST00000468477 TMC4Q7Z404 712 aa4.76□□□□□ -1.65
CDHR3-206ENST00000468477 ZNF438Q7Z4V0 828 aa4.76□□□□□ -1.65
CDHR3-206ENST00000468477 WDR75Q8IWA0 830 aaKnown RBP4.76□□□□□ -1.65
CDHR3-206ENST00000468477 ZNF654Q8IZM8 581 aa4.76□□□□□ -1.65
CDHR3-206ENST00000468477 OR13H1Q8NG92 308 aa4.76□□□□□ -1.65
CDHR3-206ENST00000468477 PMEPA1Q969W9 287 aa4.76□□□□□ -1.65
CDHR3-206ENST00000468477 RNPC3Q96LT9 517 aaKnown RBP4.76□□□□□ -1.65
CDHR3-206ENST00000468477 CEP89Q96ST8 783 aa4.76□□□□□ -1.65
CDHR3-206ENST00000468477 MPHOSPH6Q99547 160 aaKnown RBP4.76□□□□□ -1.65
CDHR3-206ENST00000468477 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.76□□□□□ -1.65
CDHR3-206ENST00000468477 MRPL18Q9H0U6 180 aaKnown RBP4.76□□□□□ -1.65
CDHR3-206ENST00000468477 TYW1Q9NV66 732 aaKnown RBP4.76□□□□□ -1.65
CDHR3-206ENST00000468477 ANP32CO43423 234 aa4.75□□□□□ -1.65
CDHR3-206ENST00000468477 PLIN1O60240 522 aa4.75□□□□□ -1.65
CDHR3-206ENST00000468477 PRPF40AO75400 957 aaKnown RBP4.75□□□□□ -1.65
CDHR3-206ENST00000468477 LDHAP00338 332 aaKnown RBP4.75□□□□□ -1.65
CDHR3-206ENST00000468477 HSP90AA1P07900 732 aaKnown RBP4.75□□□□□ -1.65
CDHR3-206ENST00000468477 IREB2P48200 963 aaKnown RBP4.75□□□□□ -1.65
CDHR3-206ENST00000468477 CABP4P57796 275 aa4.75□□□□□ -1.65
CDHR3-206ENST00000468477 CHMP4BP1P59074 171 aa4.75□□□□□ -1.65
CDHR3-206ENST00000468477 DAB2P98082 770 aa4.75□□□□□ -1.65
CDHR3-206ENST00000468477 SF3B2Q13435 895 aaKnown RBP4.75□□□□□ -1.65
CDHR3-206ENST00000468477 DHX8Q14562 1220 aaKnown RBP4.75□□□□□ -1.65
CDHR3-206ENST00000468477 ZRSR2Q15696 482 aaKnown RBP4.75□□□□□ -1.65
CDHR3-206ENST00000468477 GRIK5Q16478 980 aa4.75□□□□□ -1.65
CDHR3-206ENST00000468477 ZNF394Q53GI3 561 aa4.75□□□□□ -1.65
CDHR3-206ENST00000468477 PLEKHG4Q58EX7 1191 aa4.75□□□□□ -1.65
CDHR3-206ENST00000468477 NKAPLQ5M9Q1 402 aa4.75□□□□□ -1.65
CDHR3-206ENST00000468477 CEP135Q66GS9 1140 aa4.75□□□□□ -1.65
CDHR3-206ENST00000468477 ZNF280DQ6N043 979 aa4.75□□□□□ -1.65
CDHR3-206ENST00000468477 RINLQ6ZS11 566 aa4.75□□□□□ -1.65
CDHR3-206ENST00000468477 CKAP2LQ8IYA6 745 aa4.75□□□□□ -1.65
CDHR3-206ENST00000468477 WFDC12Q8WWY7 111 aa4.75□□□□□ -1.65
CDHR3-206ENST00000468477 SEPT3Q9UH03 358 aa4.75□□□□□ -1.65
CDHR3-206ENST00000468477 EID1Q9Y6B2 187 aa4.75□□□□□ -1.65
CDHR3-206ENST00000468477 TNFRSF10BO14763 440 aa4.74□□□□□ -1.65
CDHR3-206ENST00000468477 FGRP09769 529 aa4.74□□□□□ -1.65
CDHR3-206ENST00000468477 RACK1P63244 317 aaKnown RBP4.74□□□□□ -1.65
CDHR3-206ENST00000468477 PLCB3Q01970 1234 aa4.74□□□□□ -1.65
CDHR3-206ENST00000468477 TRIP4Q15650 581 aaPredicted RBP4.74□□□□□ -1.65
CDHR3-206ENST00000468477 PRSS36Q5K4E3 855 aa4.74□□□□□ -1.65
CDHR3-206ENST00000468477 CCSAPQ6IQ19 270 aaPredicted RBP4.74□□□□□ -1.65
CDHR3-206ENST00000468477 Q8N3U1 123 aa4.74□□□□□ -1.65
CDHR3-206ENST00000468477 HELQQ8TDG4 1101 aa4.74□□□□□ -1.65
CDHR3-206ENST00000468477 TMC1Q8TDI8 760 aa4.74□□□□□ -1.65
CDHR3-206ENST00000468477 TSR2Q969E8 191 aaKnown RBP4.74□□□□□ -1.65
CDHR3-206ENST00000468477 NUDT16Q96DE0 195 aaKnown RBP4.74□□□□□ -1.65
CDHR3-206ENST00000468477 AKTIPQ9H8T0 292 aa4.74□□□□□ -1.65
CDHR3-206ENST00000468477 MAP3K20Q9NYL2 800 aaKnown RBP4.74□□□□□ -1.65
CDHR3-206ENST00000468477 DDX41Q9UJV9 622 aaKnown RBP4.74□□□□□ -1.65
CDHR3-206ENST00000468477 THRAP3Q9Y2W1 955 aaKnown RBP4.74□□□□□ -1.65
CDHR3-206ENST00000468477 PCDHGB7Q9Y5F8 929 aa4.74□□□□□ -1.65
CDHR3-206ENST00000468477 KAT6BQ8WYB5 2073 aa4.73□□□□□ -1.65
CDHR3-206ENST00000468477 KIF3BO15066 747 aa4.73□□□□□ -1.65
CDHR3-206ENST00000468477 TREHO43280 583 aa4.73□□□□□ -1.65
CDHR3-206ENST00000468477 PTPRAP18433 802 aa4.73□□□□□ -1.65
CDHR3-206ENST00000468477 CD53P19397 219 aa4.73□□□□□ -1.65
CDHR3-206ENST00000468477 CES1P23141 567 aa4.73□□□□□ -1.65
CDHR3-206ENST00000468477 CDC27P30260 824 aa4.73□□□□□ -1.65
CDHR3-206ENST00000468477 PDE6BP35913 854 aa4.73□□□□□ -1.65
CDHR3-206ENST00000468477 GNALP38405 381 aa4.73□□□□□ -1.65
CDHR3-206ENST00000468477 USP5P45974 858 aa4.73□□□□□ -1.65
CDHR3-206ENST00000468477 DNM1Q05193 864 aaKnown RBP4.73□□□□□ -1.65
CDHR3-206ENST00000468477 FMR1Q06787 632 aaKnown RBP eCLIP4.73□□□□□ -1.65
CDHR3-206ENST00000468477 EHHADHQ08426 723 aa4.73□□□□□ -1.65
CDHR3-206ENST00000468477 HDAC1Q13547 482 aaPredicted RBP4.73□□□□□ -1.65
CDHR3-206ENST00000468477 C8orf34Q49A92 452 aa4.73□□□□□ -1.65
CDHR3-206ENST00000468477 PPP4R4Q6NUP7 873 aa4.73□□□□□ -1.65
CDHR3-206ENST00000468477 NBPF11Q86T75 865 aa4.73□□□□□ -1.65
CDHR3-206ENST00000468477 MKL1Q969V6 931 aa4.73□□□□□ -1.65
CDHR3-206ENST00000468477 SRPK1Q96SB4 655 aaKnown RBP4.73□□□□□ -1.65
CDHR3-206ENST00000468477 RBCK1Q9BYM8 510 aa4.73□□□□□ -1.65
CDHR3-206ENST00000468477 ELP3Q9H9T3 547 aa4.73□□□□□ -1.65
CDHR3-206ENST00000468477 HOMER2Q9NSB8 354 aa4.73□□□□□ -1.65
CDHR3-206ENST00000468477 CFAP69A5D8W1 941 aa4.72□□□□□ -1.65
CDHR3-206ENST00000468477 DLL1O00548 723 aa4.72□□□□□ -1.65
CDHR3-206ENST00000468477 EPB41L2O43491 1005 aaKnown RBP4.72□□□□□ -1.65
CDHR3-206ENST00000468477 CAND2O75155 1236 aa4.72□□□□□ -1.65
CDHR3-206ENST00000468477 CDC45O75419 566 aa4.72□□□□□ -1.65
CDHR3-206ENST00000468477 FAM13AO94988 1023 aa4.72□□□□□ -1.65
CDHR3-206ENST00000468477 VIL1P09327 827 aaKnown RBP4.72□□□□□ -1.65
CDHR3-206ENST00000468477 ARL4DP49703 201 aa4.72□□□□□ -1.65
CDHR3-206ENST00000468477 SERINC3Q13530 473 aa4.72□□□□□ -1.65
CDHR3-206ENST00000468477 SYCP2LQ5T4T6 812 aa4.72□□□□□ -1.65
CDHR3-206ENST00000468477 CAPN12Q6ZSI9 719 aa4.72□□□□□ -1.65
CDHR3-206ENST00000468477 PCGF5Q86SE9 256 aa4.72□□□□□ -1.65
CDHR3-206ENST00000468477 USP48Q86UV5 1035 aa4.72□□□□□ -1.65
CDHR3-206ENST00000468477 SLC51AQ86UW1 340 aa4.72□□□□□ -1.65
CDHR3-206ENST00000468477 RAVER1Q8IY67 606 aaKnown RBP4.72□□□□□ -1.65
CDHR3-206ENST00000468477 TMEM130Q8N3G9 435 aa4.72□□□□□ -1.65
CDHR3-206ENST00000468477 PAF1Q8N7H5 531 aa4.72□□□□□ -1.65
CDHR3-206ENST00000468477 PDILTQ8N807 584 aa4.72□□□□□ -1.65
CDHR3-206ENST00000468477 KLHL23Q8NBE8 558 aa4.72□□□□□ -1.65
CDHR3-206ENST00000468477 EDEM1Q92611 657 aa4.72□□□□□ -1.65
CDHR3-206ENST00000468477 APBA2Q99767 749 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms