RNA–Protein interactions for RNA: ENST00000468284.1

CKAP2-205, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 3

Gene CKAP2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-205ENST00000468284 KDRP35968 1356 aa12.57□□□□□ -0.4
CKAP2-205ENST00000468284 TMEM229AB2RXF0 380 aa12.57□□□□□ -0.4
CKAP2-205ENST00000468284 ITGB2P05107 769 aa12.57□□□□□ -0.4
CKAP2-205ENST00000468284 HSPA8P11142 646 aaKnown RBP12.57□□□□□ -0.4
CKAP2-205ENST00000468284 LMNB1P20700 586 aa12.57□□□□□ -0.4
CKAP2-205ENST00000468284 SLCO4C1Q6ZQN7 724 aa12.57□□□□□ -0.4
CKAP2-205ENST00000468284 SPOCK3Q9BQ16 436 aa12.57□□□□□ -0.4
CKAP2-205ENST00000468284 ZCCHC2Q9C0B9 1178 aaKnown RBP12.57□□□□□ -0.4
CKAP2-205ENST00000468284 TERF2IPQ9NYB0 399 aa12.57□□□□□ -0.4
CKAP2-205ENST00000468284 GGA1Q9UJY5 639 aa12.57□□□□□ -0.4
CKAP2-205ENST00000468284 PCDHGC4Q9Y5F7 938 aa12.57□□□□□ -0.4
CKAP2-205ENST00000468284 RTL1A6NKG5 1358 aa12.56□□□□□ -0.4
CKAP2-205ENST00000468284 PIK3CDO00329 1044 aa12.56□□□□□ -0.4
CKAP2-205ENST00000468284 RPS6KA4O75676 772 aa12.56□□□□□ -0.4
CKAP2-205ENST00000468284 RGS19P49795 217 aa12.56□□□□□ -0.4
CKAP2-205ENST00000468284 NLRP8Q86W28 1048 aa12.56□□□□□ -0.4
CKAP2-205ENST00000468284 CCDC88AQ3V6T2 1871 aa12.55□□□□□ -0.4
CKAP2-205ENST00000468284 COL5A3P25940 1745 aaPredicted RBP12.55□□□□□ -0.4
CKAP2-205ENST00000468284 NFKBIEO00221 500 aa12.55□□□□□ -0.4
CKAP2-205ENST00000468284 AMPD1P23109 780 aa12.55□□□□□ -0.4
CKAP2-205ENST00000468284 GGNBP2Q9H3C7 697 aa12.55□□□□□ -0.4
CKAP2-205ENST00000468284 COG6Q9Y2V7 657 aa12.55□□□□□ -0.4
CKAP2-205ENST00000468284 SMG6Q86US8 1419 aaKnown RBP12.54□□□□□ -0.4
CKAP2-205ENST00000468284 VIRMAQ69YN4 1812 aaKnown RBP12.54□□□□□ -0.4
CKAP2-205ENST00000468284 A6NJY4 79 aa12.54□□□□□ -0.4
CKAP2-205ENST00000468284 MTFR1Q15390 333 aa12.54□□□□□ -0.4
CKAP2-205ENST00000468284 INSRP06213 1382 aa12.54□□□□□ -0.4
CKAP2-205ENST00000468284 POLRMTO00411 1230 aaKnown RBP12.53□□□□□ -0.4
CKAP2-205ENST00000468284 CDK2AP1O14519 115 aa12.53□□□□□ -0.4
CKAP2-205ENST00000468284 ATXN7O15265 892 aaPredicted RBP12.53□□□□□ -0.4
CKAP2-205ENST00000468284 EML3Q32P44 896 aa12.53□□□□□ -0.4
CKAP2-205ENST00000468284 ARSJQ5FYB0 599 aaPredicted RBP12.53□□□□□ -0.4
CKAP2-205ENST00000468284 ZNF295-AS1Q8N0V1 137 aa12.53□□□□□ -0.4
CKAP2-205ENST00000468284 IQSEC3Q9UPP2 1182 aaPredicted RBP12.53□□□□□ -0.4
CKAP2-205ENST00000468284 PCDHGA11Q9Y5H2 935 aa12.53□□□□□ -0.4
CKAP2-205ENST00000468284 PASKQ96RG2 1323 aa12.53□□□□□ -0.4
CKAP2-205ENST00000468284 MYH14Q7Z406 1995 aaKnown RBP12.52□□□□□ -0.4
CKAP2-205ENST00000468284 A0A1W2PNR3 127 aa12.52□□□□□ -0.41
CKAP2-205ENST00000468284 PROCP04070 461 aa12.52□□□□□ -0.41
CKAP2-205ENST00000468284 ARAFP10398 606 aa12.52□□□□□ -0.41
CKAP2-205ENST00000468284 PHKG2P15735 406 aa12.52□□□□□ -0.41
CKAP2-205ENST00000468284 TM4SF1P30408 202 aa12.52□□□□□ -0.41
CKAP2-205ENST00000468284 USP3Q9Y6I4 520 aa12.52□□□□□ -0.41
CKAP2-205ENST00000468284 CNTNAP4Q9C0A0 1308 aa12.52□□□□□ -0.41
CKAP2-205ENST00000468284 DCDC2BA2VCK2 349 aa12.51□□□□□ -0.41
CKAP2-205ENST00000468284 FYB1O15117 783 aa12.51□□□□□ -0.41
CKAP2-205ENST00000468284 DDNO94850 711 aaPredicted RBP12.51□□□□□ -0.41
CKAP2-205ENST00000468284 SKIP12755 728 aa12.51□□□□□ -0.41
CKAP2-205ENST00000468284 SIN3AQ96ST3 1273 aa12.51□□□□□ -0.41
CKAP2-205ENST00000468284 ZDHHC3Q9NYG2 299 aa12.51□□□□□ -0.41
CKAP2-205ENST00000468284 SPG7Q9UQ90 795 aa12.51□□□□□ -0.41
CKAP2-205ENST00000468284 USP42Q9H9J4 1324 aaKnown RBP12.51□□□□□ -0.41
CKAP2-205ENST00000468284 NEURL1BA8MQ27 555 aa12.5□□□□□ -0.41
CKAP2-205ENST00000468284 EPXP11678 715 aa12.5□□□□□ -0.41
CKAP2-205ENST00000468284 ALYREFQ86V81 257 aaKnown RBP12.5□□□□□ -0.41
CKAP2-205ENST00000468284 ADAMTS7Q9UKP4 1686 aa12.49□□□□□ -0.41
CKAP2-205ENST00000468284 KRBA1A5PL33 1030 aa12.49□□□□□ -0.41
CKAP2-205ENST00000468284 MAPTP10636 758 aaKnown RBP12.49□□□□□ -0.41
CKAP2-205ENST00000468284 HOXB4P17483 251 aaPredicted RBP12.49□□□□□ -0.41
CKAP2-205ENST00000468284 COL8A1P27658 744 aa12.49□□□□□ -0.41
CKAP2-205ENST00000468284 NOD1Q9Y239 953 aa12.49□□□□□ -0.41
CKAP2-205ENST00000468284 ZNF831Q5JPB2 1677 aa12.48□□□□□ -0.41
CKAP2-205ENST00000468284 NCAPD2Q15021 1401 aa12.48□□□□□ -0.41
CKAP2-205ENST00000468284 FLT4P35916 1363 aa12.48□□□□□ -0.41
CKAP2-205ENST00000468284 CARMIL3Q8ND23 1372 aa12.48□□□□□ -0.41
CKAP2-205ENST00000468284 TMEM88BA6NKF7 163 aa12.48□□□□□ -0.41
CKAP2-205ENST00000468284 BACH1O14867 736 aa12.48□□□□□ -0.41
CKAP2-205ENST00000468284 CRKLP46109 303 aaKnown RBP12.48□□□□□ -0.41
CKAP2-205ENST00000468284 GTF2IP78347 998 aa12.48□□□□□ -0.41
CKAP2-205ENST00000468284 TNP2Q05952 138 aa12.48□□□□□ -0.41
CKAP2-205ENST00000468284 WWC1Q8IX03 1113 aa12.48□□□□□ -0.41
CKAP2-205ENST00000468284 IFNL2Q8IZJ0 200 aa12.48□□□□□ -0.41
CKAP2-205ENST00000468284 ALG2Q9H553 416 aa12.48□□□□□ -0.41
CKAP2-205ENST00000468284 DLEC1Q9Y238 1755 aa12.48□□□□□ -0.41
CKAP2-205ENST00000468284 AFDNP55196 1824 aaKnown RBP12.47□□□□□ -0.41
CKAP2-205ENST00000468284 KHNYNO15037 678 aaKnown RBP12.47□□□□□ -0.41
CKAP2-205ENST00000468284 PTCD1O75127 700 aaKnown RBP12.47□□□□□ -0.41
CKAP2-205ENST00000468284 CD33P20138 364 aa12.47□□□□□ -0.41
CKAP2-205ENST00000468284 USPL1Q5W0Q7 1092 aa12.47□□□□□ -0.41
CKAP2-205ENST00000468284 LINC00114Q6XXX2 140 aa12.47□□□□□ -0.41
CKAP2-205ENST00000468284 TTLL6Q8N841 843 aa12.47□□□□□ -0.41
CKAP2-205ENST00000468284 BTBD6Q96KE9 485 aa12.47□□□□□ -0.41
CKAP2-205ENST00000468284 GJA3Q9Y6H8 435 aa12.47□□□□□ -0.41
CKAP2-205ENST00000468284 WDR33Q9C0J8 1336 aaKnown RBP12.46□□□□□ -0.41
CKAP2-205ENST00000468284 PIK3R2O00459 728 aa12.46□□□□□ -0.41
CKAP2-205ENST00000468284 LZTS3O60299 673 aaPredicted RBP12.46□□□□□ -0.41
CKAP2-205ENST00000468284 NCOA4Q13772 614 aa12.46□□□□□ -0.41
CKAP2-205ENST00000468284 NFIXQ14938 502 aa12.46□□□□□ -0.41
CKAP2-205ENST00000468284 GRIN2CQ14957 1233 aa12.46□□□□□ -0.41
CKAP2-205ENST00000468284 C2CD5Q86YS7 1000 aa12.46□□□□□ -0.41
CKAP2-205ENST00000468284 NFATC2IPQ8NCF5 419 aa12.46□□□□□ -0.41
CKAP2-205ENST00000468284 ZIC5Q96T25 663 aa12.46□□□□□ -0.41
CKAP2-205ENST00000468284 CARD11Q9BXL7 1154 aa12.46□□□□□ -0.41
CKAP2-205ENST00000468284 HCN2Q9UL51 889 aa12.46□□□□□ -0.41
CKAP2-205ENST00000468284 RASSF10A6NK89 507 aa12.45□□□□□ -0.42
CKAP2-205ENST00000468284 C21orf2O43822 256 aa12.45□□□□□ -0.42
CKAP2-205ENST00000468284 ADAM23O75077 832 aa12.45□□□□□ -0.42
CKAP2-205ENST00000468284 ADH6P28332 368 aa12.45□□□□□ -0.42
CKAP2-205ENST00000468284 NEUROD1Q13562 356 aa12.45□□□□□ -0.42
CKAP2-205ENST00000468284 DEFB115Q30KQ5 88 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms