RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 EGFRP00533 1210 aa18.32■□□□□ 0.52
SNIP1-202ENST00000468040 PPP4CP60510 307 aa18.32■□□□□ 0.52
SNIP1-202ENST00000468040 ZMYM1Q5SVZ6 1142 aa18.32■□□□□ 0.52
SNIP1-202ENST00000468040 MIGA1Q8NAN2 632 aa18.32■□□□□ 0.52
SNIP1-202ENST00000468040 PRMT6Q96LA8 375 aaPredicted RBP18.32■□□□□ 0.52
SNIP1-202ENST00000468040 NMRK2Q9NPI5 230 aa18.32■□□□□ 0.52
SNIP1-202ENST00000468040 CHGBP05060 677 aa18.31■□□□□ 0.52
SNIP1-202ENST00000468040 SLFNL1Q499Z3 407 aa18.31■□□□□ 0.52
SNIP1-202ENST00000468040 CASC1Q6TDU7 716 aa18.31■□□□□ 0.52
SNIP1-202ENST00000468040 HELLSQ9NRZ9 838 aa18.31■□□□□ 0.52
SNIP1-202ENST00000468040 AATFQ9NY61 560 aaKnown RBP eCLIP18.31■□□□□ 0.523e-6■■■□□ 18.2
SNIP1-202ENST00000468040 TMOD2Q9NZR1 351 aa18.31■□□□□ 0.52
SNIP1-202ENST00000468040 PCDHAC2Q9Y5I4 1007 aa18.31■□□□□ 0.52
SNIP1-202ENST00000468040 CDC45O75419 566 aa18.3■□□□□ 0.52
SNIP1-202ENST00000468040 NBPF9Q3BBW0 867 aa18.3■□□□□ 0.52
SNIP1-202ENST00000468040 ZC3H15Q8WU90 426 aaKnown RBP18.3■□□□□ 0.52
SNIP1-202ENST00000468040 RUFY2Q8WXA3 655 aa18.3■□□□□ 0.52
SNIP1-202ENST00000468040 OSBP2Q969R2 916 aa18.3■□□□□ 0.52
SNIP1-202ENST00000468040 AIDAQ96BJ3 306 aa18.3■□□□□ 0.52
SNIP1-202ENST00000468040 PUS7LQ9H0K6 701 aaKnown RBP18.3■□□□□ 0.52
SNIP1-202ENST00000468040 USP40Q9NVE5 1235 aa18.3■□□□□ 0.52
SNIP1-202ENST00000468040 ECM29Q5VYK3 1845 aa18.3■□□□□ 0.52
SNIP1-202ENST00000468040 MBD4O95243 580 aa18.29■□□□□ 0.52
SNIP1-202ENST00000468040 CHMLP26374 656 aa18.29■□□□□ 0.52
SNIP1-202ENST00000468040 HIRAP54198 1017 aaPredicted RBP18.29■□□□□ 0.52
SNIP1-202ENST00000468040 NMIQ13287 307 aaPredicted RBP18.29■□□□□ 0.52
SNIP1-202ENST00000468040 SPDYE2Q495Y8 402 aa18.29■□□□□ 0.52
SNIP1-202ENST00000468040 MCMDC2Q4G0Z9 681 aa18.29■□□□□ 0.52
SNIP1-202ENST00000468040 EAPPQ56P03 285 aaPredicted RBP18.29■□□□□ 0.52
SNIP1-202ENST00000468040 CDC42EP5Q6NZY7 148 aa18.29■□□□□ 0.52
SNIP1-202ENST00000468040 CWC27Q6UX04 472 aaKnown RBP18.29■□□□□ 0.52
SNIP1-202ENST00000468040 FAM227BQ96M60 508 aa18.29■□□□□ 0.52
SNIP1-202ENST00000468040 RIOK1Q9BRS2 568 aaKnown RBP18.29■□□□□ 0.52
SNIP1-202ENST00000468040 TDRD3Q9H7E2 651 aaKnown RBP18.29■□□□□ 0.52
SNIP1-202ENST00000468040 RAD50Q92878 1312 aa18.28■□□□□ 0.52
SNIP1-202ENST00000468040 A0A0D9SFI3 127 aa18.28■□□□□ 0.52
SNIP1-202ENST00000468040 RHBDL3P58872 404 aa18.28■□□□□ 0.52
SNIP1-202ENST00000468040 ZNF70Q9UC06 446 aaPredicted RBP18.28■□□□□ 0.52
SNIP1-202ENST00000468040 PITPNM2Q9BZ72 1349 aa18.27■□□□□ 0.52
SNIP1-202ENST00000468040 CLRN2A0PK11 232 aa18.27■□□□□ 0.52
SNIP1-202ENST00000468040 M0R2C6 588 aa18.27■□□□□ 0.52
SNIP1-202ENST00000468040 GPAA1O43292 621 aa18.27■□□□□ 0.52
SNIP1-202ENST00000468040 GNAT2P19087 354 aa18.27■□□□□ 0.52
SNIP1-202ENST00000468040 MFAP1P55081 439 aaKnown RBP18.27■□□□□ 0.52
SNIP1-202ENST00000468040 DYNLL1P63167 89 aaKnown RBP18.27■□□□□ 0.52
SNIP1-202ENST00000468040 TNFAIP1Q13829 316 aa18.27■□□□□ 0.52
SNIP1-202ENST00000468040 FKBP1CQ5VVH2 108 aa18.27■□□□□ 0.52
SNIP1-202ENST00000468040 APOBEC3FQ8IUX4 373 aaKnown RBP18.27■□□□□ 0.52
SNIP1-202ENST00000468040 TEX11Q8IYF3 940 aa18.27■□□□□ 0.52
SNIP1-202ENST00000468040 LCORLQ8N3X6 602 aa18.27■□□□□ 0.52
SNIP1-202ENST00000468040 SH3RF3Q8TEJ3 882 aaPredicted RBP18.27■□□□□ 0.52
SNIP1-202ENST00000468040 SEC62Q99442 399 aaKnown RBP18.27■□□□□ 0.52
SNIP1-202ENST00000468040 CRNKL1Q9BZJ0 848 aaKnown RBP18.27■□□□□ 0.52
SNIP1-202ENST00000468040 ARMT1Q9H993 441 aa18.27■□□□□ 0.52
SNIP1-202ENST00000468040 GGA3Q9NZ52 723 aa18.27■□□□□ 0.52
SNIP1-202ENST00000468040 ANGEL2Q5VTE6 544 aaKnown RBP18.26■□□□□ 0.51
SNIP1-202ENST00000468040 LDHDQ86WU2 507 aa18.26■□□□□ 0.51
SNIP1-202ENST00000468040 DCPSQ96C86 337 aaKnown RBP18.26■□□□□ 0.51
SNIP1-202ENST00000468040 STRBPQ96SI9 672 aaKnown RBP18.26■□□□□ 0.51
SNIP1-202ENST00000468040 IDI2Q9BXS1 227 aa18.26■□□□□ 0.51
SNIP1-202ENST00000468040 VEZTQ9HBM0 779 aa18.26■□□□□ 0.51
SNIP1-202ENST00000468040 PGAP2Q9UHJ9 254 aa18.26■□□□□ 0.51
SNIP1-202ENST00000468040 NPM3O75607 178 aaKnown RBP18.25■□□□□ 0.51
SNIP1-202ENST00000468040 TNNI2P48788 182 aa18.25■□□□□ 0.51
SNIP1-202ENST00000468040 ZNF784Q8NCA9 323 aaPredicted RBP18.25■□□□□ 0.51
SNIP1-202ENST00000468040 CLEC11AQ9Y240 323 aa18.25■□□□□ 0.51
SNIP1-202ENST00000468040 ASTN2O75129 1339 aaPredicted RBP18.24■□□□□ 0.51
SNIP1-202ENST00000468040 CCDC171Q6TFL3 1326 aa18.24■□□□□ 0.51
SNIP1-202ENST00000468040 WDHD1O75717 1129 aaPredicted RBP18.24■□□□□ 0.51
SNIP1-202ENST00000468040 USP5P45974 858 aa18.24■□□□□ 0.51
SNIP1-202ENST00000468040 DDRGK1Q96HY6 314 aa18.24■□□□□ 0.51
SNIP1-202ENST00000468040 SLC4A4Q9Y6R1 1079 aa18.24■□□□□ 0.51
SNIP1-202ENST00000468040 RPAP1Q9BWH6 1393 aaPredicted RBP18.24■□□□□ 0.51
SNIP1-202ENST00000468040 SGSM2O43147 1006 aa18.23■□□□□ 0.51
SNIP1-202ENST00000468040 ENTPD3O75355 529 aa18.23■□□□□ 0.51
SNIP1-202ENST00000468040 CACNB3P54284 484 aa18.23■□□□□ 0.51
SNIP1-202ENST00000468040 CCDC129Q6ZRS4 1044 aa18.23■□□□□ 0.51
SNIP1-202ENST00000468040 FAM83AQ86UY5 434 aa18.23■□□□□ 0.51
SNIP1-202ENST00000468040 SULF1Q8IWU6 871 aa18.23■□□□□ 0.51
SNIP1-202ENST00000468040 TGFBRAP1Q8WUH2 860 aa18.23■□□□□ 0.51
SNIP1-202ENST00000468040 ATP8A2Q9NTI2 1148 aa18.23■□□□□ 0.51
SNIP1-202ENST00000468040 FOCADQ5VW36 1801 aa18.22■□□□□ 0.51
SNIP1-202ENST00000468040 TCP10L2B9ZVM9 353 aa18.22■□□□□ 0.51
SNIP1-202ENST00000468040 KIF3CO14782 793 aa18.22■□□□□ 0.51
SNIP1-202ENST00000468040 NFIAQ12857 509 aa18.22■□□□□ 0.51
SNIP1-202ENST00000468040 PICALMQ13492 652 aa18.22■□□□□ 0.51
SNIP1-202ENST00000468040 ZNF589Q86UQ0 364 aaPredicted RBP18.22■□□□□ 0.51
SNIP1-202ENST00000468040 ESYT1Q9BSJ8 1104 aa18.22■□□□□ 0.51
SNIP1-202ENST00000468040 NACAP1Q9BZK3 213 aa18.22■□□□□ 0.51
SNIP1-202ENST00000468040 PPP2R3BQ9Y5P8 575 aa18.22■□□□□ 0.51
SNIP1-202ENST00000468040 FLT1P17948 1338 aa18.22■□□□□ 0.51
SNIP1-202ENST00000468040 PATL2C9JE40 543 aaKnown RBP18.21■□□□□ 0.51
SNIP1-202ENST00000468040 POTEIP0CG38 1075 aa18.21■□□□□ 0.51
SNIP1-202ENST00000468040 POTEJP0CG39 1038 aa18.21■□□□□ 0.51
SNIP1-202ENST00000468040 GIMAP6Q6P9H5 292 aa18.21■□□□□ 0.51
SNIP1-202ENST00000468040 CDC37L1Q7L3B6 337 aa18.21■□□□□ 0.51
SNIP1-202ENST00000468040 KRT26Q7Z3Y9 468 aa18.21■□□□□ 0.51
SNIP1-202ENST00000468040 SDR42E1Q8WUS8 393 aa18.21■□□□□ 0.51
SNIP1-202ENST00000468040 FAM151AQ8WW52 585 aa18.21■□□□□ 0.51
SNIP1-202ENST00000468040 DEFB129Q9H1M3 183 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms