RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 DYNLL1P63167 89 aaKnown RBP13.42□□□□□ -0.26
VCP-204ENST00000466100 CFAP100Q494V2 611 aa13.42□□□□□ -0.26
VCP-204ENST00000466100 MCMDC2Q4G0Z9 681 aa13.42□□□□□ -0.26
VCP-204ENST00000466100 CCDC129Q6ZRS4 1044 aa13.42□□□□□ -0.26
VCP-204ENST00000466100 LCORLQ8N3X6 602 aa13.42□□□□□ -0.26
VCP-204ENST00000466100 MIGA1Q8NAN2 632 aa13.42□□□□□ -0.26
VCP-204ENST00000466100 MYOZ2Q9NPC6 264 aa13.42□□□□□ -0.26
VCP-204ENST00000466100 HDAC9Q9UKV0 1011 aa13.42□□□□□ -0.26
VCP-204ENST00000466100 CCDC171Q6TFL3 1326 aa13.41□□□□□ -0.26
VCP-204ENST00000466100 SIPA1L1O43166 1804 aa13.41□□□□□ -0.26
VCP-204ENST00000466100 POTECB2RU33 542 aa13.41□□□□□ -0.26
VCP-204ENST00000466100 GPAA1O43292 621 aa13.41□□□□□ -0.26
VCP-204ENST00000466100 MBD4O95243 580 aa13.41□□□□□ -0.26
VCP-204ENST00000466100 EPS15P42566 896 aa13.41□□□□□ -0.26
VCP-204ENST00000466100 BTDP43251 543 aa13.41□□□□□ -0.26
VCP-204ENST00000466100 DPY19L2Q6NUT2 758 aa13.41□□□□□ -0.26
VCP-204ENST00000466100 OGFOD1Q8N543 542 aa13.41□□□□□ -0.26
VCP-204ENST00000466100 STRBPQ96SI9 672 aaKnown RBP13.41□□□□□ -0.26
VCP-204ENST00000466100 AATFQ9NY61 560 aaKnown RBP eCLIP13.41□□□□□ -0.26
VCP-204ENST00000466100 MAGEB6P1A0A0J9YX57 407 aa13.4□□□□□ -0.26
VCP-204ENST00000466100 CDC42EP5Q6NZY7 148 aa13.4□□□□□ -0.26
VCP-204ENST00000466100 SAMD7Q7Z3H4 446 aa13.4□□□□□ -0.26
VCP-204ENST00000466100 TRPM4Q8TD43 1214 aa13.4□□□□□ -0.26
VCP-204ENST00000466100 SH3RF3Q8TEJ3 882 aaPredicted RBP13.4□□□□□ -0.26
VCP-204ENST00000466100 RUFY2Q8WXA3 655 aa13.4□□□□□ -0.26
VCP-204ENST00000466100 PRMT6Q96LA8 375 aaPredicted RBP13.4□□□□□ -0.26
VCP-204ENST00000466100 ARMT1Q9H993 441 aa13.4□□□□□ -0.26
VCP-204ENST00000466100 H7C1D1 291 aa13.39□□□□□ -0.27
VCP-204ENST00000466100 WNT10BO00744 389 aa13.39□□□□□ -0.27
VCP-204ENST00000466100 BAG3O95817 575 aa13.39□□□□□ -0.27
VCP-204ENST00000466100 DLGAP5Q15398 846 aa13.39□□□□□ -0.27
VCP-204ENST00000466100 KIF4BQ2VIQ3 1234 aa13.39□□□□□ -0.27
VCP-204ENST00000466100 CASC1Q6TDU7 716 aa13.39□□□□□ -0.27
VCP-204ENST00000466100 CERS3Q8IU89 383 aa13.39□□□□□ -0.27
VCP-204ENST00000466100 AIDAQ96BJ3 306 aa13.39□□□□□ -0.27
VCP-204ENST00000466100 WDHD1O75717 1129 aaPredicted RBP13.38□□□□□ -0.27
VCP-204ENST00000466100 LMOD1P29536 600 aaPredicted RBP13.38□□□□□ -0.27
VCP-204ENST00000466100 RBM5P52756 815 aaKnown RBP eCLIP13.38□□□□□ -0.27
VCP-204ENST00000466100 HIRAP54198 1017 aaPredicted RBP13.38□□□□□ -0.27
VCP-204ENST00000466100 NBPF9Q3BBW0 867 aa13.38□□□□□ -0.27
VCP-204ENST00000466100 SPDYE2Q495Y8 402 aa13.38□□□□□ -0.27
VCP-204ENST00000466100 TBC1D10BQ4KMP7 808 aaPredicted RBP13.38□□□□□ -0.27
VCP-204ENST00000466100 VPS53Q5VIR6 699 aa13.38□□□□□ -0.27
VCP-204ENST00000466100 LSG1Q9H089 658 aaKnown RBP13.38□□□□□ -0.27
VCP-204ENST00000466100 EPB41L4AQ9HCS5 686 aaPredicted RBP13.38□□□□□ -0.27
VCP-204ENST00000466100 ADARB2Q9NS39 739 aaKnown RBP13.38□□□□□ -0.27
VCP-204ENST00000466100 MKRN1Q9UHC7 482 aaKnown RBP13.38□□□□□ -0.27
VCP-204ENST00000466100 COL2A1P02458 1487 aaPredicted RBP13.37□□□□□ -0.27
VCP-204ENST00000466100 RPAP1Q9BWH6 1393 aaPredicted RBP13.37□□□□□ -0.27
VCP-204ENST00000466100 GSG1L2A8MUP6 293 aa13.37□□□□□ -0.27
VCP-204ENST00000466100 PRKAB2O43741 272 aa13.37□□□□□ -0.27
VCP-204ENST00000466100 SEC24BO95487 1268 aa13.37□□□□□ -0.27
VCP-204ENST00000466100 PLCG2P16885 1265 aa13.37□□□□□ -0.27
VCP-204ENST00000466100 PTH1RQ03431 593 aa13.37□□□□□ -0.27
VCP-204ENST00000466100 NOL10Q9BSC4 688 aaKnown RBP13.37□□□□□ -0.27
VCP-204ENST00000466100 IDI2Q9BXS1 227 aa13.37□□□□□ -0.27
VCP-204ENST00000466100 BACH2Q9BYV9 841 aa13.37□□□□□ -0.27
VCP-204ENST00000466100 CRNKL1Q9BZJ0 848 aaKnown RBP13.37□□□□□ -0.27
VCP-204ENST00000466100 TAF1DQ9H5J8 278 aaPredicted RBP13.37□□□□□ -0.27
VCP-204ENST00000466100 TDRD3Q9H7E2 651 aaKnown RBP13.37□□□□□ -0.27
VCP-204ENST00000466100 DDX4Q9NQI0 724 aaKnown RBP13.37□□□□□ -0.27
VCP-204ENST00000466100 USP40Q9NVE5 1235 aa13.37□□□□□ -0.27
VCP-204ENST00000466100 ZNF70Q9UC06 446 aaPredicted RBP13.37□□□□□ -0.27
VCP-204ENST00000466100 HACL1Q9UJ83 578 aa13.37□□□□□ -0.27
VCP-204ENST00000466100 MYH8P13535 1937 aa13.37□□□□□ -0.27
VCP-204ENST00000466100 ASTN2O75129 1339 aaPredicted RBP13.37□□□□□ -0.27
VCP-204ENST00000466100 ZMYM6O95789 1325 aa13.37□□□□□ -0.27
VCP-204ENST00000466100 IQCA1LA6NCM1 817 aa13.36□□□□□ -0.27
VCP-204ENST00000466100 NPM3O75607 178 aaKnown RBP13.36□□□□□ -0.27
VCP-204ENST00000466100 HSPD1P10809 573 aaKnown RBP13.36□□□□□ -0.27
VCP-204ENST00000466100 GNAT2P19087 354 aa13.36□□□□□ -0.27
VCP-204ENST00000466100 EPHX2P34913 555 aa13.36□□□□□ -0.27
VCP-204ENST00000466100 MFAP1P55081 439 aaKnown RBP13.36□□□□□ -0.27
VCP-204ENST00000466100 NFIAQ12857 509 aa13.36□□□□□ -0.27
VCP-204ENST00000466100 TEX11Q8IYF3 940 aa13.36□□□□□ -0.27
VCP-204ENST00000466100 SDR42E1Q8WUS8 393 aa13.36□□□□□ -0.27
VCP-204ENST00000466100 DSCC1Q9BVC3 393 aa13.36□□□□□ -0.27
VCP-204ENST00000466100 FAM198AQ9UFP1 575 aa13.36□□□□□ -0.27
VCP-204ENST00000466100 FLT1P17948 1338 aa13.36□□□□□ -0.27
VCP-204ENST00000466100 CNTNAP1P78357 1384 aa13.35□□□□□ -0.27
VCP-204ENST00000466100 PATL2C9JE40 543 aaKnown RBP13.35□□□□□ -0.27
VCP-204ENST00000466100 CACNB3P54284 484 aa13.35□□□□□ -0.27
VCP-204ENST00000466100 ALX1Q15699 326 aa13.35□□□□□ -0.27
VCP-204ENST00000466100 RBM26Q5T8P6 1007 aaKnown RBP13.35□□□□□ -0.27
VCP-204ENST00000466100 FKBP1CQ5VVH2 108 aa13.35□□□□□ -0.27
VCP-204ENST00000466100 GIMAP6Q6P9H5 292 aa13.35□□□□□ -0.27
VCP-204ENST00000466100 USP50Q70EL3 339 aaPredicted RBP13.35□□□□□ -0.27
VCP-204ENST00000466100 DCP1AQ9NPI6 582 aaPredicted RBP13.35□□□□□ -0.27
VCP-204ENST00000466100 ATP8A2Q9NTI2 1148 aa13.35□□□□□ -0.27
VCP-204ENST00000466100 SLC4A4Q9Y6R1 1079 aa13.35□□□□□ -0.27
VCP-204ENST00000466100 CLRN2A0PK11 232 aa13.34□□□□□ -0.27
VCP-204ENST00000466100 REC8O95072 547 aa13.34□□□□□ -0.27
VCP-204ENST00000466100 TGFBRAP1Q8WUH2 860 aa13.34□□□□□ -0.27
VCP-204ENST00000466100 MAP4K1Q92918 833 aa13.34□□□□□ -0.27
VCP-204ENST00000466100 NMRK2Q9NPI5 230 aa13.34□□□□□ -0.27
VCP-204ENST00000466100 ANO2Q9NQ90 1003 aa13.34□□□□□ -0.27
VCP-204ENST00000466100 PGAP2Q9UHJ9 254 aa13.34□□□□□ -0.27
VCP-204ENST00000466100 PITPNM2Q9BZ72 1349 aa13.34□□□□□ -0.27
VCP-204ENST00000466100 ATRNL1Q5VV63 1379 aa13.33□□□□□ -0.27
VCP-204ENST00000466100 PAPPA2Q9BXP8 1791 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms