RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 PDE3AQ14432 1141 aa8.03□□□□□ -1.12
LRCH3-211ENST00000466054 LILRA6Q6PI73 481 aa8.03□□□□□ -1.12
LRCH3-211ENST00000466054 ADAMTS6Q9UKP5 1117 aa8.03□□□□□ -1.12
LRCH3-211ENST00000466054 TNFRSF21O75509 655 aa8.02□□□□□ -1.13
LRCH3-211ENST00000466054 FAM87AP0C7U9 286 aa8.02□□□□□ -1.13
LRCH3-211ENST00000466054 PRKCQQ04759 706 aa8.02□□□□□ -1.13
LRCH3-211ENST00000466054 MLANAQ16655 118 aa8.02□□□□□ -1.13
LRCH3-211ENST00000466054 WFDC3Q8IUB2 231 aa8.02□□□□□ -1.13
LRCH3-211ENST00000466054 HRASLS5Q96KN8 279 aa8.02□□□□□ -1.13
LRCH3-211ENST00000466054 PPP1R16BQ96T49 567 aa8.02□□□□□ -1.13
LRCH3-211ENST00000466054 NRSN2Q9GZP1 204 aa8.02□□□□□ -1.13
LRCH3-211ENST00000466054 CLEC4MQ9H2X3 399 aaPredicted RBP8.02□□□□□ -1.13
LRCH3-211ENST00000466054 PIDD1Q9HB75 910 aa8.02□□□□□ -1.13
LRCH3-211ENST00000466054 AMOTL2Q9Y2J4 779 aa8.02□□□□□ -1.13
LRCH3-211ENST00000466054 KCNMB1Q16558 191 aa8.01□□□□□ -1.13
LRCH3-211ENST00000466054 AOC3Q16853 763 aa8.01□□□□□ -1.13
LRCH3-211ENST00000466054 TMEM164Q5U3C3 297 aa8.01□□□□□ -1.13
LRCH3-211ENST00000466054 ANGEL2Q5VTE6 544 aaKnown RBP8.01□□□□□ -1.13
LRCH3-211ENST00000466054 ZSWIM9Q86XI8 627 aa8.01□□□□□ -1.13
LRCH3-211ENST00000466054 HELQQ8TDG4 1101 aa8.01□□□□□ -1.13
LRCH3-211ENST00000466054 CLP1Q92989 425 aaKnown RBP8.01□□□□□ -1.13
LRCH3-211ENST00000466054 LATS2Q9NRM7 1088 aa8.01□□□□□ -1.13
LRCH3-211ENST00000466054 TMEM88BA6NKF7 163 aa8□□□□□ -1.13
LRCH3-211ENST00000466054 ATP2B4P23634 1241 aa8□□□□□ -1.13
LRCH3-211ENST00000466054 CD96P40200 585 aa8□□□□□ -1.13
LRCH3-211ENST00000466054 EIF1AXP47813 144 aaKnown RBP8□□□□□ -1.13
LRCH3-211ENST00000466054 EHHADHQ08426 723 aa8□□□□□ -1.13
LRCH3-211ENST00000466054 MESP2Q0VG99 397 aa8□□□□□ -1.13
LRCH3-211ENST00000466054 CDK5R2Q13319 367 aa8□□□□□ -1.13
LRCH3-211ENST00000466054 IFI16Q16666 785 aaKnown RBP8□□□□□ -1.13
LRCH3-211ENST00000466054 SEZ6L2Q6UXD5 910 aa8□□□□□ -1.13
LRCH3-211ENST00000466054 TRAIPQ9BWF2 469 aa8□□□□□ -1.13
LRCH3-211ENST00000466054 A0A096LPE4 126 aa7.99□□□□□ -1.13
LRCH3-211ENST00000466054 A0A1W2PPZ6 126 aa7.99□□□□□ -1.13
LRCH3-211ENST00000466054 CTSBP07858 339 aa7.99□□□□□ -1.13
LRCH3-211ENST00000466054 ALKBH2Q6NS38 261 aa7.99□□□□□ -1.13
LRCH3-211ENST00000466054 LRRC56Q8IYG6 542 aaPredicted RBP7.99□□□□□ -1.13
LRCH3-211ENST00000466054 FOXD3Q9UJU5 478 aaPredicted RBP7.99□□□□□ -1.13
LRCH3-211ENST00000466054 POLIQ9UNA4 740 aa7.99□□□□□ -1.13
LRCH3-211ENST00000466054 KRTAP9-7A8MTY7 169 aa7.98□□□□□ -1.13
LRCH3-211ENST00000466054 PRRG2O14669 202 aa7.98□□□□□ -1.13
LRCH3-211ENST00000466054 AOC2O75106 756 aa7.98□□□□□ -1.13
LRCH3-211ENST00000466054 PDIA4P13667 645 aaKnown RBP7.98□□□□□ -1.13
LRCH3-211ENST00000466054 ANKLE2Q86XL3 938 aa7.98□□□□□ -1.13
LRCH3-211ENST00000466054 TMEM265A0A087WTH1 108 aa7.97□□□□□ -1.13
LRCH3-211ENST00000466054 B8ZZF3 427 aa7.97□□□□□ -1.13
LRCH3-211ENST00000466054 MPSTP25325 297 aa7.97□□□□□ -1.13
LRCH3-211ENST00000466054 USP5P45974 858 aa7.97□□□□□ -1.13
LRCH3-211ENST00000466054 ZNF423Q2M1K9 1284 aa7.97□□□□□ -1.13
LRCH3-211ENST00000466054 PEAR1Q5VY43 1037 aaPredicted RBP7.97□□□□□ -1.13
LRCH3-211ENST00000466054 SLC23A3Q6PIS1 610 aa7.97□□□□□ -1.13
LRCH3-211ENST00000466054 GSX1Q9H4S2 264 aaPredicted RBP7.97□□□□□ -1.13
LRCH3-211ENST00000466054 NCANO14594 1321 aa7.97□□□□□ -1.13
LRCH3-211ENST00000466054 CFPP27918 469 aa7.96□□□□□ -1.14
LRCH3-211ENST00000466054 HNRNPUQ00839 825 aaKnown RBP eCLIP7.96□□□□□ -1.14
LRCH3-211ENST00000466054 FLAD1Q8NFF5 587 aa7.96□□□□□ -1.14
LRCH3-211ENST00000466054 TSPAN15O95858 294 aa7.95□□□□□ -1.14
LRCH3-211ENST00000466054 CEACAM5P06731 702 aa7.95□□□□□ -1.14
LRCH3-211ENST00000466054 ZSCAN22P10073 491 aaPredicted RBP7.95□□□□□ -1.14
LRCH3-211ENST00000466054 B4GALNT3Q6L9W6 998 aa7.95□□□□□ -1.14
LRCH3-211ENST00000466054 ATXN3LQ9H3M9 355 aa7.95□□□□□ -1.14
LRCH3-211ENST00000466054 LIN7BQ9HAP6 207 aa7.95□□□□□ -1.14
LRCH3-211ENST00000466054 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.95□□□□□ -1.14
LRCH3-211ENST00000466054 ECEL1O95672 775 aa7.94□□□□□ -1.14
LRCH3-211ENST00000466054 POLR3DP05423 398 aaPredicted RBP7.94□□□□□ -1.14
LRCH3-211ENST00000466054 ITIH2P19823 946 aa7.94□□□□□ -1.14
LRCH3-211ENST00000466054 MPZL3Q6UWV2 235 aa7.94□□□□□ -1.14
LRCH3-211ENST00000466054 WDR18Q9BV38 432 aa7.94□□□□□ -1.14
LRCH3-211ENST00000466054 MKNK2Q9HBH9 465 aa7.94□□□□□ -1.14
LRCH3-211ENST00000466054 RNGTTO60942 597 aaKnown RBP7.93□□□□□ -1.14
LRCH3-211ENST00000466054 SLFN14P0C7P3 912 aa7.93□□□□□ -1.14
LRCH3-211ENST00000466054 IKZF1Q13422 519 aa7.93□□□□□ -1.14
LRCH3-211ENST00000466054 SPRED3Q2MJR0 410 aa7.93□□□□□ -1.14
LRCH3-211ENST00000466054 SYDE1Q6ZW31 735 aaPredicted RBP7.93□□□□□ -1.14
LRCH3-211ENST00000466054 SIAH1Q8IUQ4 282 aa7.93□□□□□ -1.14
LRCH3-211ENST00000466054 CCNJLQ8IV13 435 aa7.93□□□□□ -1.14
LRCH3-211ENST00000466054 PPP1R9AQ9ULJ8 1098 aa7.93□□□□□ -1.14
LRCH3-211ENST00000466054 AP3B2Q13367 1082 aa7.92□□□□□ -1.14
LRCH3-211ENST00000466054 LCE5AQ5TCM9 118 aa7.92□□□□□ -1.14
LRCH3-211ENST00000466054 SMYD4Q8IYR2 804 aaPredicted RBP7.92□□□□□ -1.14
LRCH3-211ENST00000466054 LIN37Q96GY3 246 aaPredicted RBP7.92□□□□□ -1.14
LRCH3-211ENST00000466054 TRIM56Q9BRZ2 755 aaKnown RBP7.92□□□□□ -1.14
LRCH3-211ENST00000466054 ZFYVE28Q9HCC9 887 aa7.92□□□□□ -1.14
LRCH3-211ENST00000466054 PRDM7Q9NQW5 492 aa7.92□□□□□ -1.14
LRCH3-211ENST00000466054 LMCD1Q9NZU5 365 aa7.92□□□□□ -1.14
LRCH3-211ENST00000466054 ZNF503-AS2A6NEH8 195 aa7.91□□□□□ -1.14
LRCH3-211ENST00000466054 BRD1O95696 1058 aa7.91□□□□□ -1.14
LRCH3-211ENST00000466054 B3GALT4O96024 378 aa7.91□□□□□ -1.14
LRCH3-211ENST00000466054 GRIA4P48058 902 aa7.91□□□□□ -1.14
LRCH3-211ENST00000466054 LCNL1Q6ZST4 164 aa7.91□□□□□ -1.14
LRCH3-211ENST00000466054 KRTAP17-1Q9BYP8 105 aa7.91□□□□□ -1.14
LRCH3-211ENST00000466054 SSU72Q9NP77 194 aaKnown RBP7.91□□□□□ -1.14
LRCH3-211ENST00000466054 CRIM1Q9NZV1 1036 aa7.91□□□□□ -1.14
LRCH3-211ENST00000466054 SYNGAP1Q96PV0 1343 aa7.91□□□□□ -1.14
LRCH3-211ENST00000466054 A0A1W2PP55 124 aa7.9□□□□□ -1.14
LRCH3-211ENST00000466054 CARNS1A5YM72 827 aa7.9□□□□□ -1.14
LRCH3-211ENST00000466054 NFIBO00712 420 aa7.9□□□□□ -1.14
LRCH3-211ENST00000466054 AFMP43652 599 aa7.9□□□□□ -1.14
LRCH3-211ENST00000466054 ID3Q02535 119 aa7.9□□□□□ -1.14
LRCH3-211ENST00000466054 GTF3C2Q8WUA4 911 aaPredicted RBP7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms