RNA–Protein interactions for RNA: ENST00000465655.2

RPL39P28-201, Transcript of ribosomal protein L39 pseudogene 28, humanhuman

BASIC

Gene RPL39P28, Length 155 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P28-201ENST00000465655 SUPT3HO75486 399 aa1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 STAM2O75886 525 aa1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 DDHD2O94830 711 aa1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 BPNT1O95861 308 aa1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 SLC4A1P02730 911 aa1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 VIL1P09327 827 aaKnown RBP1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 PARP1P09874 1014 aaKnown RBP1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 PNMA6AP0CW24 399 aaPredicted RBP1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 ZSCAN22P10073 491 aaPredicted RBP1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 HSPA8P11142 646 aaKnown RBP1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 GNAT1P11488 350 aa1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 PCP11498 1178 aaKnown RBP1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 KRT10P13645 584 aa1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 KRT13P13646 458 aa1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 EZRP15311 586 aaKnown RBP1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 ZNF16P17020 682 aaPredicted RBP1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 DDX5P17844 614 aaKnown RBP1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 EIF2S2P20042 333 aaKnown RBP1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 ENDOUP21128 410 aaKnown RBP1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 TNFAIP3P21580 790 aa1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 CCNCP24863 283 aa1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 MCM3P25205 808 aa1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 ANXA13P27216 316 aa1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 HOXD10P28358 340 aa1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 CDC25CP30307 473 aa1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 ALDH1B1P30837 517 aa1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 HOXC13P31276 330 aa1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 HOXD11P31277 338 aaPredicted RBP1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 PRKAR2BP31323 418 aa1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 HNRNPH1P31943 449 aaKnown RBP1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 MAN1A1P33908 653 aa1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 HSPA1LP34931 641 aa1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 SLC16A2P36021 539 aa1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 CETN2P41208 172 aa1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 EPS15P42566 896 aa1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 PSMC4P43686 418 aa1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 TRAPPC10P48553 1259 aa1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 LIG3P49916 1009 aa1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 MXI1P50539 228 aa1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 PAPOLAP51003 745 aaKnown RBP1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 PDE6CP51160 858 aa1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 PSMD7P51665 324 aa1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 RRP1P56182 461 aaKnown RBP1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 MARSP56192 900 aaKnown RBP1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 MAP3K7CLP57077 242 aa1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 TBX4P57082 545 aa1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 ZC3H6P61129 1189 aaKnown RBP1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 TUBA1BP68363 451 aa1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 ST5P78524 1137 aa1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 TAGLNQ01995 201 aaKnown RBP1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 AKAP17AQ02040 695 aaKnown RBP1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 RASSF7Q02833 373 aa1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 MLLT1Q03111 559 aaPredicted RBP1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 TMEM62Q0P6H9 643 aa1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 CGNL1Q0VF96 1302 aa1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 SCRN1Q12765 414 aa1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 FAPQ12884 760 aa1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 AIMP1Q12904 312 aaKnown RBP1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 IKQ13123 557 aaPredicted RBP1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 CBX3Q13185 183 aa1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 STK3Q13188 491 aa1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 PDAP1Q13442 181 aaKnown RBP1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 CUL3Q13618 768 aa1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 CUL4BQ13620 913 aa1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 ITGA7Q13683 1181 aa1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 ZMYM3Q14202 1370 aa1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 MAP7Q14244 749 aa1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 PDIA5Q14554 519 aa1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 MYBPC3Q14896 1274 aa1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 ARHGEF6Q15052 776 aa1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 BRD3Q15059 726 aa1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 WDR43Q15061 677 aaKnown RBP eCLIP1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 POSTNQ15063 836 aa1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 TCEAL1Q15170 157 aa1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 SF3B3Q15393 1217 aaKnown RBP1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 TAF11Q15544 211 aa1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 TAF1CQ15572 869 aaPredicted RBP1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 INAQ16352 499 aa1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 TAF12Q16514 161 aa1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 TPD52L1Q16890 204 aaPredicted RBP1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 C21orf62-AS1Q17RA5 79 aa1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 SKIDA1Q1XH10 827 aa1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 MUM1Q2TAK8 710 aa1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 LETM2Q2VYF4 491 aa1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 Q3C1V9 767 aa1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 CCDC40Q4G0X9 1142 aa1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 ESCO1Q5FWF5 840 aa1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 CEP85LQ5SZL2 805 aa1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 RBM20Q5T481 1227 aaKnown RBP1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 EFCAB2Q5VUJ9 269 aa1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 CCDC30Q5VVM6 783 aa1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 TCERG1LQ5VWI1 586 aa1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 FBXW10Q5XX13 1052 aa1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 TSHZ3Q63HK5 1081 aa1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 EGFLAMQ63HQ2 1017 aa1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 TRIM68Q6AZZ1 485 aa1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 GALNT17Q6IS24 598 aa1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 IRGCQ6NXR0 463 aa1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 NEK5Q6P3R8 708 aa1.02□□□□□ -2.25
RPL39P28-201ENST00000465655 SLC30A9Q6PML9 568 aa1.02□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms