RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 BTDP43251 543 aa24.73■■□□□ 1.55
SKA3-205ENST00000465471 CACNB3P54284 484 aa24.73■■□□□ 1.55
SKA3-205ENST00000465471 NUCB1Q02818 461 aa24.73■■□□□ 1.55
SKA3-205ENST00000465471 RASA3Q14644 834 aa24.73■■□□□ 1.55
SKA3-205ENST00000465471 TSHZ3Q63HK5 1081 aa24.73■■□□□ 1.55
SKA3-205ENST00000465471 NAA16Q6N069 864 aaPredicted RBP24.73■■□□□ 1.55
SKA3-205ENST00000465471 PI4K2BQ8TCG2 481 aa24.73■■□□□ 1.55
SKA3-205ENST00000465471 DNAJC2Q99543 621 aaKnown RBP24.73■■□□□ 1.55
SKA3-205ENST00000465471 PAG1Q9NWQ8 432 aa24.73■■□□□ 1.55
SKA3-205ENST00000465471 RPAP1Q9BWH6 1393 aaPredicted RBP24.72■■□□□ 1.55
SKA3-205ENST00000465471 IDH1O75874 414 aaKnown RBP24.72■■□□□ 1.55
SKA3-205ENST00000465471 MX1P20591 662 aa24.72■■□□□ 1.55
SKA3-205ENST00000465471 RHBDL3P58872 404 aa24.72■■□□□ 1.55
SKA3-205ENST00000465471 PRAMEF18Q5VWM3 479 aa24.72■■□□□ 1.55
SKA3-205ENST00000465471 ADGRA1Q86SQ6 560 aa24.72■■□□□ 1.55
SKA3-205ENST00000465471 FAM83AQ86UY5 434 aa24.72■■□□□ 1.55
SKA3-205ENST00000465471 EDC3Q96F86 508 aaKnown RBP24.72■■□□□ 1.55
SKA3-205ENST00000465471 TEPSINQ96N21 525 aa24.72■■□□□ 1.55
SKA3-205ENST00000465471 ZNF408Q9H9D4 720 aa24.72■■□□□ 1.55
SKA3-205ENST00000465471 TMOD2Q9NZR1 351 aa24.72■■□□□ 1.55
SKA3-205ENST00000465471 TLL2Q9Y6L7 1015 aa24.72■■□□□ 1.55
SKA3-205ENST00000465471 MYH7P12883 1935 aa24.72■■□□□ 1.55
SKA3-205ENST00000465471 TCP10L2B9ZVM9 353 aa24.71■■□□□ 1.55
SKA3-205ENST00000465471 MAP3K12Q12852 859 aa24.71■■□□□ 1.55
SKA3-205ENST00000465471 CHD1LQ86WJ1 897 aa24.71■■□□□ 1.55
SKA3-205ENST00000465471 IDI2Q9BXS1 227 aa24.71■■□□□ 1.55
SKA3-205ENST00000465471 GBA2Q9HCG7 927 aaPredicted RBP24.71■■□□□ 1.55
SKA3-205ENST00000465471 USP40Q9NVE5 1235 aa24.71■■□□□ 1.55
SKA3-205ENST00000465471 ZBTB47Q9UFB7 747 aaPredicted RBP24.71■■□□□ 1.55
SKA3-205ENST00000465471 STAP2Q9UGK3 403 aa24.71■■□□□ 1.55
SKA3-205ENST00000465471 RASSF10A6NK89 507 aa24.7■■□□□ 1.54
SKA3-205ENST00000465471 MAP4K4O95819 1239 aaPredicted RBP24.7■■□□□ 1.54
SKA3-205ENST00000465471 TNNI2P48788 182 aa24.7■■□□□ 1.54
SKA3-205ENST00000465471 NFIAQ12857 509 aa24.7■■□□□ 1.54
SKA3-205ENST00000465471 SAPCD2Q86UD0 394 aa24.7■■□□□ 1.54
SKA3-205ENST00000465471 DNAJC5GQ8N7S2 189 aa24.7■■□□□ 1.54
SKA3-205ENST00000465471 LNPKQ9C0E8 428 aa24.7■■□□□ 1.54
SKA3-205ENST00000465471 CDK5RAP2Q96SN8 1893 aa24.7■■□□□ 1.54
SKA3-205ENST00000465471 FOCADQ5VW36 1801 aa24.7■■□□□ 1.54
SKA3-205ENST00000465471 PPP4CP60510 307 aa24.69■■□□□ 1.54
SKA3-205ENST00000465471 FKBP1BP68106 108 aa24.69■■□□□ 1.54
SKA3-205ENST00000465471 B4GALNT3Q6L9W6 998 aa24.69■■□□□ 1.54
SKA3-205ENST00000465471 TMEM39BQ9GZU3 492 aa24.69■■□□□ 1.54
SKA3-205ENST00000465471 FAM198AQ9UFP1 575 aa24.69■■□□□ 1.54
SKA3-205ENST00000465471 ERC2O15083 957 aa24.68■■□□□ 1.54
SKA3-205ENST00000465471 WDHD1O75717 1129 aaPredicted RBP24.68■■□□□ 1.54
SKA3-205ENST00000465471 CDAN1Q8IWY9 1227 aa24.68■■□□□ 1.54
SKA3-205ENST00000465471 MAGEB6Q8N7X4 407 aa24.68■■□□□ 1.54
SKA3-205ENST00000465471 HHIPL1Q96JK4 782 aa24.68■■□□□ 1.54
SKA3-205ENST00000465471 GLRX3O76003 335 aaKnown RBP24.67■■□□□ 1.54
SKA3-205ENST00000465471 PDE6AP16499 860 aa24.67■■□□□ 1.54
SKA3-205ENST00000465471 CYP7A1P22680 504 aa24.67■■□□□ 1.54
SKA3-205ENST00000465471 PDE1AP54750 535 aa24.67■■□□□ 1.54
SKA3-205ENST00000465471 NBPF12Q5TAG4 269 aaPredicted RBP24.67■■□□□ 1.54
SKA3-205ENST00000465471 FAM151AQ8WW52 585 aa24.67■■□□□ 1.54
SKA3-205ENST00000465471 ABT1Q9ULW3 272 aaKnown RBP24.67■■□□□ 1.54
SKA3-205ENST00000465471 TCRBV5S4A2TA0A5A2 114 aa24.66■■□□□ 1.54
SKA3-205ENST00000465471 NPM3O75607 178 aaKnown RBP24.66■■□□□ 1.54
SKA3-205ENST00000465471 NF2P35240 595 aa24.66■■□□□ 1.54
SKA3-205ENST00000465471 C2orf69Q8N8R5 385 aa24.66■■□□□ 1.54
SKA3-205ENST00000465471 ENTPD3O75355 529 aa24.65■■□□□ 1.54
SKA3-205ENST00000465471 BAG3O95817 575 aa24.65■■□□□ 1.54
SKA3-205ENST00000465471 RGS3P49796 1198 aa24.65■■□□□ 1.54
SKA3-205ENST00000465471 SUPT20HL1Q3ZLR7 823 aa24.65■■□□□ 1.54
SKA3-205ENST00000465471 SLC9C2Q5TAH2 1124 aa24.65■■□□□ 1.54
SKA3-205ENST00000465471 DDX4Q9NQI0 724 aaKnown RBP24.65■■□□□ 1.54
SKA3-205ENST00000465471 AATFQ9NY61 560 aaKnown RBP eCLIP24.65■■□□□ 1.54
SKA3-205ENST00000465471 THSD7BQ9C0I4 1608 aa24.64■■□□□ 1.54
SKA3-205ENST00000465471 COL2A1P02458 1487 aaPredicted RBP24.64■■□□□ 1.54
SKA3-205ENST00000465471 ADD2P35612 726 aa24.64■■□□□ 1.54
SKA3-205ENST00000465471 MAP3K11Q16584 847 aa24.64■■□□□ 1.54
SKA3-205ENST00000465471 KBTBD3Q8NAB2 608 aa24.64■■□□□ 1.54
SKA3-205ENST00000465471 SH3RF3Q8TEJ3 882 aaPredicted RBP24.64■■□□□ 1.54
SKA3-205ENST00000465471 KLRG1Q96E93 195 aa24.64■■□□□ 1.54
SKA3-205ENST00000465471 OTOFQ9HC10 1997 aa24.63■■□□□ 1.53
SKA3-205ENST00000465471 ZNF532Q9HCE3 1301 aa24.63■■□□□ 1.53
SKA3-205ENST00000465471 PLCG2P16885 1265 aa24.63■■□□□ 1.53
SKA3-205ENST00000465471 HUNKP57058 714 aa24.63■■□□□ 1.53
SKA3-205ENST00000465471 CERS3Q8IU89 383 aa24.63■■□□□ 1.53
SKA3-205ENST00000465471 NOL10Q9BSC4 688 aaKnown RBP24.63■■□□□ 1.53
SKA3-205ENST00000465471 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.63■■□□□ 1.53
SKA3-205ENST00000465471 OSBPL3Q9H4L5 887 aa24.63■■□□□ 1.53
SKA3-205ENST00000465471 TCP10Q12799 353 aa24.62■■□□□ 1.53
SKA3-205ENST00000465471 DEFB115Q30KQ5 88 aa24.62■■□□□ 1.53
SKA3-205ENST00000465471 MOB2Q70IA6 237 aa24.62■■□□□ 1.53
SKA3-205ENST00000465471 PLEKHM2Q8IWE5 1019 aa24.62■■□□□ 1.53
SKA3-205ENST00000465471 ZFPM1Q8IX07 1006 aa24.62■■□□□ 1.53
SKA3-205ENST00000465471 RIOK1Q9BRS2 568 aaKnown RBP24.62■■□□□ 1.53
SKA3-205ENST00000465471 MKRN1Q9UHC7 482 aaKnown RBP24.62■■□□□ 1.53
SKA3-205ENST00000465471 ATRNL1Q5VV63 1379 aa24.62■■□□□ 1.53
SKA3-205ENST00000465471 DYNLL1P63167 89 aaKnown RBP24.61■■□□□ 1.53
SKA3-205ENST00000465471 UBE3CQ15386 1083 aa24.61■■□□□ 1.53
SKA3-205ENST00000465471 TEX11Q8IYF3 940 aa24.61■■□□□ 1.53
SKA3-205ENST00000465471 MIGA1Q8NAN2 632 aa24.61■■□□□ 1.53
SKA3-205ENST00000465471 DDX60LQ5H9U9 1706 aaKnown RBP24.61■■□□□ 1.53
SKA3-205ENST00000465471 LDLRAD1Q5T700 205 aa24.6■■□□□ 1.53
SKA3-205ENST00000465471 SH3BP5LQ7L8J4 393 aa24.6■■□□□ 1.53
SKA3-205ENST00000465471 FZD1Q9UP38 647 aa24.6■■□□□ 1.53
SKA3-205ENST00000465471 CHGBP05060 677 aa24.59■■□□□ 1.53
SKA3-205ENST00000465471 NEFLP07196 543 aa24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms