RNA–Protein interactions for RNA: ENST00000464304.1

HMG20B-208, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-208ENST00000464304 APOBEC3HQ6NTF7 200 aaKnown RBP22.81■■□□□ 1.24
HMG20B-208ENST00000464304 CHD1LQ86WJ1 897 aa22.81■■□□□ 1.24
HMG20B-208ENST00000464304 SULF1Q8IWU6 871 aa22.81■■□□□ 1.24
HMG20B-208ENST00000464304 IDH1O75874 414 aaKnown RBP22.8■■□□□ 1.24
HMG20B-208ENST00000464304 VEZTQ9HBM0 779 aa22.8■■□□□ 1.24
HMG20B-208ENST00000464304 ZNF70Q9UC06 446 aaPredicted RBP22.8■■□□□ 1.24
HMG20B-208ENST00000464304 MROH7-TTC4A0A0A0MT08 1334 aa22.8■■□□□ 1.24
HMG20B-208ENST00000464304 APOBEC3FQ8IUX4 373 aaKnown RBP22.79■■□□□ 1.24
HMG20B-208ENST00000464304 SLF2Q8IX21 1173 aa22.79■■□□□ 1.24
HMG20B-208ENST00000464304 PI4K2BQ8TCG2 481 aa22.79■■□□□ 1.24
HMG20B-208ENST00000464304 PAG1Q9NWQ8 432 aa22.79■■□□□ 1.24
HMG20B-208ENST00000464304 VEGFBP49765 207 aa22.78■■□□□ 1.24
HMG20B-208ENST00000464304 GSTO1P78417 241 aa22.78■■□□□ 1.24
HMG20B-208ENST00000464304 TTF1Q15361 905 aaPredicted RBP22.78■■□□□ 1.24
HMG20B-208ENST00000464304 NAA16Q6N069 864 aaPredicted RBP22.78■■□□□ 1.24
HMG20B-208ENST00000464304 FAM163AQ96GL9 167 aaPredicted RBP22.78■■□□□ 1.24
HMG20B-208ENST00000464304 LDHCP07864 332 aa22.77■■□□□ 1.24
HMG20B-208ENST00000464304 BTDP43251 543 aa22.77■■□□□ 1.24
HMG20B-208ENST00000464304 CACNB3P54284 484 aa22.77■■□□□ 1.24
HMG20B-208ENST00000464304 ERC2O15083 957 aa22.76■■□□□ 1.23
HMG20B-208ENST00000464304 IGSF3O75054 1194 aa22.76■■□□□ 1.23
HMG20B-208ENST00000464304 GLRX3O76003 335 aaKnown RBP22.76■■□□□ 1.23
HMG20B-208ENST00000464304 PDE1AP54750 535 aa22.76■■□□□ 1.23
HMG20B-208ENST00000464304 MAP3K12Q12852 859 aa22.76■■□□□ 1.23
HMG20B-208ENST00000464304 CDC42EP5Q6NZY7 148 aa22.76■■□□□ 1.23
HMG20B-208ENST00000464304 ADGRA1Q86SQ6 560 aa22.76■■□□□ 1.23
HMG20B-208ENST00000464304 MAGEB6Q8N7X4 407 aa22.76■■□□□ 1.23
HMG20B-208ENST00000464304 STAP2Q9UGK3 403 aa22.76■■□□□ 1.23
HMG20B-208ENST00000464304 GPR75-ASB3A0A0A6YYF3 556 aa22.75■■□□□ 1.23
HMG20B-208ENST00000464304 CDCA5Q96FF9 252 aa22.75■■□□□ 1.23
HMG20B-208ENST00000464304 TCP10L2B9ZVM9 353 aa22.74■■□□□ 1.23
HMG20B-208ENST00000464304 MAP4K4O95819 1239 aaPredicted RBP22.74■■□□□ 1.23
HMG20B-208ENST00000464304 CYP7A1P22680 504 aa22.74■■□□□ 1.23
HMG20B-208ENST00000464304 PRAMEF18Q5VWM3 479 aa22.74■■□□□ 1.23
HMG20B-208ENST00000464304 ZNF408Q9H9D4 720 aa22.74■■□□□ 1.23
HMG20B-208ENST00000464304 PRDM10Q9NQV6 1147 aa22.74■■□□□ 1.23
HMG20B-208ENST00000464304 USP40Q9NVE5 1235 aa22.74■■□□□ 1.23
HMG20B-208ENST00000464304 TMOD2Q9NZR1 351 aa22.74■■□□□ 1.23
HMG20B-208ENST00000464304 MYH1P12882 1939 aa22.73■■□□□ 1.23
HMG20B-208ENST00000464304 PDE4AP27815 886 aa22.73■■□□□ 1.23
HMG20B-208ENST00000464304 LBX1P52954 281 aa22.73■■□□□ 1.23
HMG20B-208ENST00000464304 PLEKHM2Q8IWE5 1019 aa22.73■■□□□ 1.23
HMG20B-208ENST00000464304 DEFB129Q9H1M3 183 aa22.73■■□□□ 1.23
HMG20B-208ENST00000464304 CELF2O95319 508 aaKnown RBP22.72■■□□□ 1.23
HMG20B-208ENST00000464304 PDE6AP16499 860 aa22.72■■□□□ 1.23
HMG20B-208ENST00000464304 TNFAIP1Q13829 316 aa22.72■■□□□ 1.23
HMG20B-208ENST00000464304 RASA3Q14644 834 aa22.72■■□□□ 1.23
HMG20B-208ENST00000464304 CCDC136Q96JN2 1154 aa22.72■■□□□ 1.23
HMG20B-208ENST00000464304 AATFQ9NY61 560 aaKnown RBP eCLIP22.72■■□□□ 1.23
HMG20B-208ENST00000464304 RFX7Q2KHR2 1363 aa22.72■■□□□ 1.23
HMG20B-208ENST00000464304 PAPPA2Q9BXP8 1791 aa22.71■■□□□ 1.23
HMG20B-208ENST00000464304 RHBDL3P58872 404 aa22.71■■□□□ 1.23
HMG20B-208ENST00000464304 NFIAQ12857 509 aa22.71■■□□□ 1.23
HMG20B-208ENST00000464304 SLC9C2Q5TAH2 1124 aa22.71■■□□□ 1.23
HMG20B-208ENST00000464304 CST9Q5W186 159 aa22.71■■□□□ 1.23
HMG20B-208ENST00000464304 CENPQQ7L2Z9 268 aaPredicted RBP22.71■■□□□ 1.23
HMG20B-208ENST00000464304 PPP2R3BQ9Y5P8 575 aa22.71■■□□□ 1.23
HMG20B-208ENST00000464304 NAV1Q8NEY1 1877 aa22.71■■□□□ 1.23
HMG20B-208ENST00000464304 CHGBP05060 677 aa22.7■■□□□ 1.22
HMG20B-208ENST00000464304 TNNI2P48788 182 aa22.7■■□□□ 1.22
HMG20B-208ENST00000464304 CTCFP49711 727 aaPredicted RBP22.7■■□□□ 1.22
HMG20B-208ENST00000464304 SLFNL1Q499Z3 407 aa22.7■■□□□ 1.22
HMG20B-208ENST00000464304 FKBP1CQ5VVH2 108 aa22.7■■□□□ 1.22
HMG20B-208ENST00000464304 KBTBD3Q8NAB2 608 aa22.7■■□□□ 1.22
HMG20B-208ENST00000464304 NOL10Q9BSC4 688 aaKnown RBP22.7■■□□□ 1.22
HMG20B-208ENST00000464304 WBP1LQ9NX94 342 aa22.7■■□□□ 1.22
HMG20B-208ENST00000464304 ZNF532Q9HCE3 1301 aa22.7■■□□□ 1.22
HMG20B-208ENST00000464304 SSC5DA1L4H1 1573 aa22.7■■□□□ 1.22
HMG20B-208ENST00000464304 OTOFQ9HC10 1997 aa22.7■■□□□ 1.22
HMG20B-208ENST00000464304 TCRBV5S4A2TA0A5A2 114 aa22.69■■□□□ 1.22
HMG20B-208ENST00000464304 TMEM88BA6NKF7 163 aa22.69■■□□□ 1.22
HMG20B-208ENST00000464304 ADD2P35612 726 aa22.69■■□□□ 1.22
HMG20B-208ENST00000464304 PPP4CP60510 307 aa22.69■■□□□ 1.22
HMG20B-208ENST00000464304 DYNLL1P63167 89 aaKnown RBP22.69■■□□□ 1.22
HMG20B-208ENST00000464304 CDAN1Q8IWY9 1227 aa22.69■■□□□ 1.22
HMG20B-208ENST00000464304 MIGA1Q8NAN2 632 aa22.69■■□□□ 1.22
HMG20B-208ENST00000464304 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.69■■□□□ 1.224e-11■■■□□ 17.3
HMG20B-208ENST00000464304 TMEM39BQ9GZU3 492 aa22.69■■□□□ 1.22
HMG20B-208ENST00000464304 OSBPL3Q9H4L5 887 aa22.69■■□□□ 1.22
HMG20B-208ENST00000464304 FAM198AQ9UFP1 575 aa22.69■■□□□ 1.22
HMG20B-208ENST00000464304 WDHD1O75717 1129 aaPredicted RBP22.68■■□□□ 1.22
HMG20B-208ENST00000464304 BAG3O95817 575 aa22.68■■□□□ 1.22
HMG20B-208ENST00000464304 TCP10Q12799 353 aa22.68■■□□□ 1.22
HMG20B-208ENST00000464304 TMED8Q6PL24 325 aaPredicted RBP22.68■■□□□ 1.22
HMG20B-208ENST00000464304 FAM83AQ86UY5 434 aa22.68■■□□□ 1.22
HMG20B-208ENST00000464304 SH3RF3Q8TEJ3 882 aaPredicted RBP22.68■■□□□ 1.22
HMG20B-208ENST00000464304 IDI2Q9BXS1 227 aa22.68■■□□□ 1.22
HMG20B-208ENST00000464304 BAZ2AQ9UIF9 1905 aaKnown RBP22.68■■□□□ 1.22
HMG20B-208ENST00000464304 SIPA1L1O43166 1804 aa22.67■■□□□ 1.22
HMG20B-208ENST00000464304 SLC34A2O95436 690 aa22.67■■□□□ 1.22
HMG20B-208ENST00000464304 HSPA8P11142 646 aaKnown RBP22.67■■□□□ 1.22
HMG20B-208ENST00000464304 RGS3P49796 1198 aa22.67■■□□□ 1.22
HMG20B-208ENST00000464304 NBPF12Q5TAG4 269 aaPredicted RBP22.67■■□□□ 1.22
HMG20B-208ENST00000464304 ERICH6BQ5W0A0 696 aa22.67■■□□□ 1.22
HMG20B-208ENST00000464304 TEPSINQ96N21 525 aa22.67■■□□□ 1.22
HMG20B-208ENST00000464304 DDX4Q9NQI0 724 aaKnown RBP22.67■■□□□ 1.22
HMG20B-208ENST00000464304 RPAP1Q9BWH6 1393 aaPredicted RBP22.66■■□□□ 1.22
HMG20B-208ENST00000464304 DDX60LQ5H9U9 1706 aaKnown RBP22.66■■□□□ 1.22
HMG20B-208ENST00000464304 PICALMQ13492 652 aa22.66■■□□□ 1.22
HMG20B-208ENST00000464304 TEX11Q8IYF3 940 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms