RNA–Protein interactions for RNA: ENST00000461558.2

CFHR3-204, Transcript of complement factor H related 3, humanhuman

TSL 2

Gene CFHR3, Length 785 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3-204ENST00000461558 PDE3AQ14432 1141 aa8.63□□□□□ -1.03
CFHR3-204ENST00000461558 WDR18Q9BV38 432 aa8.63□□□□□ -1.03
CFHR3-204ENST00000461558 EHD4Q9H223 541 aa8.63□□□□□ -1.03
CFHR3-204ENST00000461558 NEFLP07196 543 aa8.62□□□□□ -1.03
CFHR3-204ENST00000461558 OGFOD3Q6PK18 319 aa8.62□□□□□ -1.03
CFHR3-204ENST00000461558 BCL7CQ8WUZ0 217 aaPredicted RBP8.62□□□□□ -1.03
CFHR3-204ENST00000461558 SLC5A6Q9Y289 635 aa8.62□□□□□ -1.03
CFHR3-204ENST00000461558 SYNGAP1Q96PV0 1343 aa8.61□□□□□ -1.03
CFHR3-204ENST00000461558 AP3B2Q13367 1082 aa8.61□□□□□ -1.03
CFHR3-204ENST00000461558 PLCL1Q15111 1095 aa8.61□□□□□ -1.03
CFHR3-204ENST00000461558 NPHS2Q9NP85 383 aa8.61□□□□□ -1.03
CFHR3-204ENST00000461558 PPP1R9AQ9ULJ8 1098 aa8.61□□□□□ -1.03
CFHR3-204ENST00000461558 DBX1A6NMT0 343 aa8.6□□□□□ -1.03
CFHR3-204ENST00000461558 H3BRB1 525 aa8.6□□□□□ -1.03
CFHR3-204ENST00000461558 PTPN12Q05209 780 aaKnown RBP8.6□□□□□ -1.03
CFHR3-204ENST00000461558 ORC1Q13415 861 aa8.6□□□□□ -1.03
CFHR3-204ENST00000461558 ZNF124Q15973 351 aa8.6□□□□□ -1.03
CFHR3-204ENST00000461558 ECM1Q16610 540 aa8.6□□□□□ -1.03
CFHR3-204ENST00000461558 WFDC3Q8IUB2 231 aa8.6□□□□□ -1.03
CFHR3-204ENST00000461558 KRTAP4-11Q9BYQ6 195 aa8.6□□□□□ -1.03
CFHR3-204ENST00000461558 TUT1Q9H6E5 874 aaKnown RBP8.6□□□□□ -1.03
CFHR3-204ENST00000461558 LGR6Q9HBX8 967 aa8.6□□□□□ -1.03
CFHR3-204ENST00000461558 CPNE3O75131 537 aaKnown RBP8.59□□□□□ -1.03
CFHR3-204ENST00000461558 ZNF792Q3KQV3 632 aa8.59□□□□□ -1.03
CFHR3-204ENST00000461558 FBLN7Q53RD9 439 aa8.59□□□□□ -1.03
CFHR3-204ENST00000461558 ZNF574Q6ZN55 896 aaPredicted RBP8.59□□□□□ -1.03
CFHR3-204ENST00000461558 GLYCTKQ8IVS8 523 aa8.59□□□□□ -1.03
CFHR3-204ENST00000461558 STK11IPQ8N1F8 1099 aa8.59□□□□□ -1.03
CFHR3-204ENST00000461558 ABCB6Q9NP58 842 aa8.59□□□□□ -1.03
CFHR3-204ENST00000461558 TMPRSS2O15393 492 aa8.58□□□□□ -1.04
CFHR3-204ENST00000461558 NDUFB5O43674 189 aa8.58□□□□□ -1.04
CFHR3-204ENST00000461558 PDE3BQ13370 1112 aa8.58□□□□□ -1.04
CFHR3-204ENST00000461558 PKN1Q16512 942 aa8.58□□□□□ -1.04
CFHR3-204ENST00000461558 CYP27C1Q4G0S4 372 aa8.58□□□□□ -1.04
CFHR3-204ENST00000461558 PRPF40BQ6NWY9 871 aaKnown RBP8.58□□□□□ -1.04
CFHR3-204ENST00000461558 FAM129BQ96TA1 746 aa8.58□□□□□ -1.04
CFHR3-204ENST00000461558 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.58□□□□□ -1.04
CFHR3-204ENST00000461558 FARP2O94887 1054 aaPredicted RBP8.57□□□□□ -1.04
CFHR3-204ENST00000461558 SERPINB4P48594 390 aa8.57□□□□□ -1.04
CFHR3-204ENST00000461558 ARHGAP4P98171 946 aa8.57□□□□□ -1.04
CFHR3-204ENST00000461558 B4GALNT3Q6L9W6 998 aa8.57□□□□□ -1.04
CFHR3-204ENST00000461558 SPRED2Q7Z698 418 aa8.57□□□□□ -1.04
CFHR3-204ENST00000461558 C1orf115Q9H7X2 142 aa8.57□□□□□ -1.04
CFHR3-204ENST00000461558 CRIM1Q9NZV1 1036 aa8.57□□□□□ -1.04
CFHR3-204ENST00000461558 CARMIL2Q6F5E8 1435 aa8.56□□□□□ -1.04
CFHR3-204ENST00000461558 LIG1P18858 919 aa8.56□□□□□ -1.04
CFHR3-204ENST00000461558 CDK5R2Q13319 367 aa8.56□□□□□ -1.04
CFHR3-204ENST00000461558 RPS26P11Q5JNZ5 115 aaPredicted RBP8.56□□□□□ -1.04
CFHR3-204ENST00000461558 SPOCD1Q6ZMY3 1216 aa8.56□□□□□ -1.04
CFHR3-204ENST00000461558 MISP3Q96FF7 219 aa8.56□□□□□ -1.04
CFHR3-204ENST00000461558 CCDC86Q9H6F5 360 aaKnown RBP8.56□□□□□ -1.04
CFHR3-204ENST00000461558 FAM87AP0C7U9 286 aa8.55□□□□□ -1.04
CFHR3-204ENST00000461558 WDR89Q96FK6 387 aaPredicted RBP8.55□□□□□ -1.04
CFHR3-204ENST00000461558 ATXN3LQ9H3M9 355 aa8.55□□□□□ -1.04
CFHR3-204ENST00000461558 PIDD1Q9HB75 910 aa8.55□□□□□ -1.04
CFHR3-204ENST00000461558 USTQ9Y2C2 406 aa8.55□□□□□ -1.04
CFHR3-204ENST00000461558 TMEM238LA0A1B0GVL6 79 aa8.54□□□□□ -1.04
CFHR3-204ENST00000461558 EIF1AYO14602 144 aaKnown RBP8.54□□□□□ -1.04
CFHR3-204ENST00000461558 ID3Q02535 119 aa8.54□□□□□ -1.04
CFHR3-204ENST00000461558 FAAP100Q0VG06 881 aa8.54□□□□□ -1.04
CFHR3-204ENST00000461558 BNIP3Q12983 259 aa8.54□□□□□ -1.04
CFHR3-204ENST00000461558 ATG4DQ86TL0 474 aaPredicted RBP8.54□□□□□ -1.04
CFHR3-204ENST00000461558 PLD6Q8N2A8 252 aaKnown RBP8.54□□□□□ -1.04
CFHR3-204ENST00000461558 CCDC74AQ96AQ1 378 aa8.54□□□□□ -1.04
CFHR3-204ENST00000461558 FANCD2OSQ96PS1 177 aa8.54□□□□□ -1.04
CFHR3-204ENST00000461558 ZC3H12CQ9C0D7 883 aaKnown RBP8.54□□□□□ -1.04
CFHR3-204ENST00000461558 DNAJC25Q9H1X3 360 aa8.54□□□□□ -1.04
CFHR3-204ENST00000461558 ZNF862O60290 1169 aa8.53□□□□□ -1.04
CFHR3-204ENST00000461558 GADD45BO75293 160 aaPredicted RBP8.53□□□□□ -1.04
CFHR3-204ENST00000461558 ZNF157P51786 506 aaPredicted RBP8.53□□□□□ -1.04
CFHR3-204ENST00000461558 KSR1Q8IVT5 923 aa8.53□□□□□ -1.04
CFHR3-204ENST00000461558 FAM181AQ8N9Y4 354 aa8.53□□□□□ -1.04
CFHR3-204ENST00000461558 NETO1Q8TDF5 533 aa8.53□□□□□ -1.04
CFHR3-204ENST00000461558 FAM168AQ92567 244 aa8.53□□□□□ -1.04
CFHR3-204ENST00000461558 CITED4Q96RK1 184 aa8.53□□□□□ -1.04
CFHR3-204ENST00000461558 TRAK1Q9UPV9 953 aa8.53□□□□□ -1.04
CFHR3-204ENST00000461558 GPR182O15218 404 aa8.52□□□□□ -1.05
CFHR3-204ENST00000461558 SLFN14P0C7P3 912 aa8.52□□□□□ -1.05
CFHR3-204ENST00000461558 KIF4BQ2VIQ3 1234 aa8.52□□□□□ -1.05
CFHR3-204ENST00000461558 SMYD4Q8IYR2 804 aaPredicted RBP8.52□□□□□ -1.05
CFHR3-204ENST00000461558 GLIS3Q8NEA6 775 aa8.52□□□□□ -1.05
CFHR3-204ENST00000461558 RC3H2Q9HBD1 1191 aaKnown RBP8.52□□□□□ -1.05
CFHR3-204ENST00000461558 DISC1Q9NRI5 854 aa8.52□□□□□ -1.05
CFHR3-204ENST00000461558 KRT82Q9NSB4 513 aa8.52□□□□□ -1.05
CFHR3-204ENST00000461558 PCDHGC5Q9Y5F6 944 aa8.52□□□□□ -1.05
CFHR3-204ENST00000461558 IGHA2P01877 340 aa8.51□□□□□ -1.05
CFHR3-204ENST00000461558 GSTP1P09211 210 aaKnown RBP8.51□□□□□ -1.05
CFHR3-204ENST00000461558 FUT4P22083 530 aa8.51□□□□□ -1.05
CFHR3-204ENST00000461558 HNRNPUQ00839 825 aaKnown RBP eCLIP8.51□□□□□ -1.05
CFHR3-204ENST00000461558 GRM2Q14416 872 aa8.51□□□□□ -1.05
CFHR3-204ENST00000461558 SLC38A3Q99624 504 aa8.51□□□□□ -1.05
CFHR3-204ENST00000461558 CD8BP10966 210 aa8.5□□□□□ -1.05
CFHR3-204ENST00000461558 TTLL4Q14679 1199 aa8.5□□□□□ -1.05
CFHR3-204ENST00000461558 TMEM40Q8WWA1 233 aa8.5□□□□□ -1.05
CFHR3-204ENST00000461558 NIF3L1Q9GZT8 377 aa8.5□□□□□ -1.05
CFHR3-204ENST00000461558 U3KQE9 123 aa8.5□□□□□ -1.05
CFHR3-204ENST00000461558 VAV3Q9UKW4 847 aa8.49□□□□□ -1.05
CFHR3-204ENST00000461558 RNASE1P07998 156 aaKnown RBP8.48□□□□□ -1.05
CFHR3-204ENST00000461558 HCLS1P14317 486 aaPredicted RBP8.48□□□□□ -1.05
CFHR3-204ENST00000461558 PRKCQQ04759 706 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms