RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 ADGRE1Q14246 886 aa4.78□□□□□ -1.64
VCL-203ENST00000461383 SOGA3Q5TF21 947 aa4.78□□□□□ -1.64
VCL-203ENST00000461383 FBXL19Q6PCT2 694 aa4.78□□□□□ -1.64
VCL-203ENST00000461383 AGMOQ6ZNB7 445 aa4.78□□□□□ -1.64
VCL-203ENST00000461383 DPH6Q7L8W6 267 aa4.78□□□□□ -1.64
VCL-203ENST00000461383 SULF2Q8IWU5 870 aa4.78□□□□□ -1.64
VCL-203ENST00000461383 CACTIN-AS1Q8N1I8 211 aa4.78□□□□□ -1.64
VCL-203ENST00000461383 NKD1Q969G9 470 aa4.78□□□□□ -1.64
VCL-203ENST00000461383 EAF1Q96JC9 268 aaPredicted RBP4.78□□□□□ -1.64
VCL-203ENST00000461383 SEC16BQ96JE7 1060 aa4.78□□□□□ -1.64
VCL-203ENST00000461383 NT5C1AQ9BXI3 368 aa4.78□□□□□ -1.64
VCL-203ENST00000461383 EMILIN2Q9BXX0 1053 aa4.78□□□□□ -1.64
VCL-203ENST00000461383 ADAM19Q9H013 955 aa4.78□□□□□ -1.64
VCL-203ENST00000461383 SOX13Q9UN79 622 aa4.78□□□□□ -1.64
VCL-203ENST00000461383 CYP8B1Q9UNU6 501 aa4.78□□□□□ -1.64
VCL-203ENST00000461383 C9orf172C9J069 976 aa4.77□□□□□ -1.65
VCL-203ENST00000461383 TLR3O15455 904 aaKnown RBP4.77□□□□□ -1.65
VCL-203ENST00000461383 FGRP09769 529 aa4.77□□□□□ -1.65
VCL-203ENST00000461383 ESRRAP11474 423 aaPredicted RBP4.77□□□□□ -1.65
VCL-203ENST00000461383 TFE3P19532 575 aaPredicted RBP4.77□□□□□ -1.65
VCL-203ENST00000461383 MCM4P33991 863 aa4.77□□□□□ -1.65
VCL-203ENST00000461383 HNRNPUQ00839 825 aaKnown RBP eCLIP4.77□□□□□ -1.65
VCL-203ENST00000461383 TRIM28Q13263 835 aaKnown RBP4.77□□□□□ -1.65
VCL-203ENST00000461383 FOXD4L6Q3SYB3 417 aaPredicted RBP4.77□□□□□ -1.65
VCL-203ENST00000461383 ZMYM1Q5SVZ6 1142 aa4.77□□□□□ -1.65
VCL-203ENST00000461383 LLGL2Q6P1M3 1020 aa4.77□□□□□ -1.65
VCL-203ENST00000461383 FOXD4L3Q6VB84 417 aaPredicted RBP4.77□□□□□ -1.65
VCL-203ENST00000461383 C8orf86Q6ZUL3 223 aa4.77□□□□□ -1.65
VCL-203ENST00000461383 VN1R5Q7Z5H4 357 aa4.77□□□□□ -1.65
VCL-203ENST00000461383 TRIM42Q8IWZ5 723 aa4.77□□□□□ -1.65
VCL-203ENST00000461383 CKAP2LQ8IYA6 745 aa4.77□□□□□ -1.65
VCL-203ENST00000461383 IL22RA1Q8N6P7 574 aa4.77□□□□□ -1.65
VCL-203ENST00000461383 GINM1Q9NU53 330 aa4.77□□□□□ -1.65
VCL-203ENST00000461383 UBP1Q9NZI7 540 aa4.77□□□□□ -1.65
VCL-203ENST00000461383 STRIP2Q9ULQ0 834 aa4.77□□□□□ -1.65
VCL-203ENST00000461383 R3HCC1Q9Y3T6 440 aaKnown RBP4.77□□□□□ -1.65
VCL-203ENST00000461383 FAM229AH3BQW9 127 aa4.76□□□□□ -1.65
VCL-203ENST00000461383 H3BRJ5 948 aa4.76□□□□□ -1.65
VCL-203ENST00000461383 EIF4EBP3O60516 100 aaPredicted RBP4.76□□□□□ -1.65
VCL-203ENST00000461383 LILRB5O75023 590 aa4.76□□□□□ -1.65
VCL-203ENST00000461383 H2AFB1P0C5Y9 115 aa4.76□□□□□ -1.65
VCL-203ENST00000461383 H2AFB2P0C5Z0 115 aa4.76□□□□□ -1.65
VCL-203ENST00000461383 ELNP15502 786 aa4.76□□□□□ -1.65
VCL-203ENST00000461383 EPHA1P21709 976 aa4.76□□□□□ -1.65
VCL-203ENST00000461383 ARNTP27540 789 aa4.76□□□□□ -1.65
VCL-203ENST00000461383 GSTM4Q03013 218 aa4.76□□□□□ -1.65
VCL-203ENST00000461383 COL9A2Q14055 689 aaPredicted RBP4.76□□□□□ -1.65
VCL-203ENST00000461383 SEPT6Q14141 434 aa4.76□□□□□ -1.65
VCL-203ENST00000461383 ZNF423Q2M1K9 1284 aa4.76□□□□□ -1.65
VCL-203ENST00000461383 CWF19L2Q2TBE0 894 aaKnown RBP4.76□□□□□ -1.65
VCL-203ENST00000461383 SEZ6Q53EL9 994 aa4.76□□□□□ -1.65
VCL-203ENST00000461383 FBXW10Q5XX13 1052 aa4.76□□□□□ -1.65
VCL-203ENST00000461383 TXNDC11Q6PKC3 985 aa4.76□□□□□ -1.65
VCL-203ENST00000461383 KCNB2Q92953 911 aa4.76□□□□□ -1.65
VCL-203ENST00000461383 ACSBG1Q96GR2 724 aa4.76□□□□□ -1.65
VCL-203ENST00000461383 LNPKQ9C0E8 428 aa4.76□□□□□ -1.65
VCL-203ENST00000461383 PPME1Q9Y570 386 aa4.76□□□□□ -1.65
VCL-203ENST00000461383 PCDHB5Q9Y5E4 795 aa4.76□□□□□ -1.65
VCL-203ENST00000461383 ROBO2Q9HCK4 1378 aa4.76□□□□□ -1.65
VCL-203ENST00000461383 A0A0A0MRY4 1105 aa4.75□□□□□ -1.65
VCL-203ENST00000461383 U2SURPO15042 1029 aaKnown RBP4.75□□□□□ -1.65
VCL-203ENST00000461383 SMARCA5O60264 1052 aaPredicted RBP4.75□□□□□ -1.65
VCL-203ENST00000461383 GREM1O60565 184 aa4.75□□□□□ -1.65
VCL-203ENST00000461383 F13A1P00488 732 aa4.75□□□□□ -1.65
VCL-203ENST00000461383 SELPP16109 830 aa4.75□□□□□ -1.65
VCL-203ENST00000461383 AP3B2Q13367 1082 aa4.75□□□□□ -1.65
VCL-203ENST00000461383 MBTPS1Q14703 1052 aa4.75□□□□□ -1.65
VCL-203ENST00000461383 MAP1SQ66K74 1059 aaPredicted RBP4.75□□□□□ -1.65
VCL-203ENST00000461383 BNC2Q6ZN30 1099 aaPredicted RBP4.75□□□□□ -1.65
VCL-203ENST00000461383 FAM196AQ6ZSG2 479 aa4.75□□□□□ -1.65
VCL-203ENST00000461383 CCDC84Q86UT8 332 aaPredicted RBP4.75□□□□□ -1.65
VCL-203ENST00000461383 WFDC8Q8IUA0 241 aa4.75□□□□□ -1.65
VCL-203ENST00000461383 GATAD2BQ8WXI9 593 aa4.75□□□□□ -1.65
VCL-203ENST00000461383 TTC9Q92623 222 aa4.75□□□□□ -1.65
VCL-203ENST00000461383 LENG1Q96BZ8 264 aaPredicted RBP4.75□□□□□ -1.65
VCL-203ENST00000461383 ANAPC16Q96DE5 110 aa4.75□□□□□ -1.65
VCL-203ENST00000461383 PSMG3-AS1Q96PY0 264 aa4.75□□□□□ -1.65
VCL-203ENST00000461383 FERD3LQ96RJ6 166 aa4.75□□□□□ -1.65
VCL-203ENST00000461383 CRBNQ96SW2 442 aa4.75□□□□□ -1.65
VCL-203ENST00000461383 CORO1BQ9BR76 489 aa4.75□□□□□ -1.65
VCL-203ENST00000461383 TRIM55Q9BYV6 548 aa4.75□□□□□ -1.65
VCL-203ENST00000461383 ZC3H12CQ9C0D7 883 aaKnown RBP4.75□□□□□ -1.65
VCL-203ENST00000461383 ZSWIM4Q9H7M6 989 aa4.75□□□□□ -1.65
VCL-203ENST00000461383 KCNQ5Q9NR82 932 aa4.75□□□□□ -1.65
VCL-203ENST00000461383 MRVI1Q9Y6F6 885 aa4.75□□□□□ -1.65
VCL-203ENST00000461383 LINC01387J3KSC0 135 aa4.74□□□□□ -1.65
VCL-203ENST00000461383 SOX1O00570 391 aaPredicted RBP4.74□□□□□ -1.65
VCL-203ENST00000461383 CYP11A1P05108 521 aa4.74□□□□□ -1.65
VCL-203ENST00000461383 BMP6P22004 513 aa4.74□□□□□ -1.65
VCL-203ENST00000461383 GARTP22102 1010 aa4.74□□□□□ -1.65
VCL-203ENST00000461383 SOX9P48436 509 aa4.74□□□□□ -1.65
VCL-203ENST00000461383 ZNF165P49910 485 aa4.74□□□□□ -1.65
VCL-203ENST00000461383 NRG1Q02297 640 aaPredicted RBP4.74□□□□□ -1.65
VCL-203ENST00000461383 C19orf57Q0VDD7 668 aa4.74□□□□□ -1.65
VCL-203ENST00000461383 MPP2Q14168 576 aa4.74□□□□□ -1.65
VCL-203ENST00000461383 GRIK4Q16099 956 aa4.74□□□□□ -1.65
VCL-203ENST00000461383 CCDC144BQ3MJ40 725 aa4.74□□□□□ -1.65
VCL-203ENST00000461383 ADAMTSL4Q6UY14 1074 aa4.74□□□□□ -1.65
VCL-203ENST00000461383 CCDC81Q6ZN84 652 aa4.74□□□□□ -1.65
VCL-203ENST00000461383 FBXO27Q8NI29 283 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms