RNA–Protein interactions for RNA: ENST00000461289.2

CHL1-209, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 2

Gene CHL1, Length 462 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-209ENST00000461289 TRIM42Q8IWZ5 723 aa9.88□□□□□ -0.83
CHL1-209ENST00000461289 GPRASP2Q96D09 838 aa9.88□□□□□ -0.83
CHL1-209ENST00000461289 SCARF2Q96GP6 870 aaPredicted RBP9.88□□□□□ -0.83
CHL1-209ENST00000461289 KRTAP4-6Q9BYQ5 205 aa9.88□□□□□ -0.83
CHL1-209ENST00000461289 RAD18Q9NS91 495 aa9.88□□□□□ -0.83
CHL1-209ENST00000461289 ADAMTS8Q9UP79 889 aa9.88□□□□□ -0.83
CHL1-209ENST00000461289 LOC100289279A0A1B0GTE1 492 aa9.87□□□□□ -0.83
CHL1-209ENST00000461289 TRIM37O94972 964 aa9.87□□□□□ -0.83
CHL1-209ENST00000461289 ELNP15502 786 aa9.87□□□□□ -0.83
CHL1-209ENST00000461289 ZNF252P-AS1Q0IIN9 211 aa9.87□□□□□ -0.83
CHL1-209ENST00000461289 APOBRQ0VD83 1088 aa9.87□□□□□ -0.83
CHL1-209ENST00000461289 SCARA3Q6AZY7 606 aa9.87□□□□□ -0.83
CHL1-209ENST00000461289 FBXL19Q6PCT2 694 aa9.87□□□□□ -0.83
CHL1-209ENST00000461289 PDZD3Q86UT5 571 aa9.87□□□□□ -0.83
CHL1-209ENST00000461289 UBASH3BQ8TF42 649 aa9.87□□□□□ -0.83
CHL1-209ENST00000461289 KRT82Q9NSB4 513 aa9.87□□□□□ -0.83
CHL1-209ENST00000461289 KCNK4Q9NYG8 393 aa9.87□□□□□ -0.83
CHL1-209ENST00000461289 CNTNAP5Q8WYK1 1306 aa9.86□□□□□ -0.83
CHL1-209ENST00000461289 DLL1O00548 723 aa9.86□□□□□ -0.83
CHL1-209ENST00000461289 ADAM11O75078 769 aa9.86□□□□□ -0.83
CHL1-209ENST00000461289 ECEL1O95672 775 aa9.86□□□□□ -0.83
CHL1-209ENST00000461289 ACAD11Q709F0 780 aa9.86□□□□□ -0.83
CHL1-209ENST00000461289 CCDC84Q86UT8 332 aaPredicted RBP9.86□□□□□ -0.83
CHL1-209ENST00000461289 TINF2Q9BSI4 451 aa9.86□□□□□ -0.83
CHL1-209ENST00000461289 CCDC86Q9H6F5 360 aaKnown RBP9.86□□□□□ -0.83
CHL1-209ENST00000461289 PCDHA4Q9UN74 947 aa9.86□□□□□ -0.83
CHL1-209ENST00000461289 FAM181BA6NEQ2 426 aa9.85□□□□□ -0.83
CHL1-209ENST00000461289 BNC2Q6ZN30 1099 aaPredicted RBP9.85□□□□□ -0.83
CHL1-209ENST00000461289 ILDR2Q71H61 639 aa9.85□□□□□ -0.83
CHL1-209ENST00000461289 GPBAR1Q8TDU6 330 aa9.85□□□□□ -0.83
CHL1-209ENST00000461289 SPATA32Q96LK8 384 aa9.85□□□□□ -0.83
CHL1-209ENST00000461289 RUSC1Q9BVN2 902 aa9.85□□□□□ -0.83
CHL1-209ENST00000461289 NRSN2Q9GZP1 204 aa9.85□□□□□ -0.83
CHL1-209ENST00000461289 MRPL18Q9H0U6 180 aaKnown RBP9.85□□□□□ -0.83
CHL1-209ENST00000461289 USP35Q9P2H5 1018 aa9.85□□□□□ -0.83
CHL1-209ENST00000461289 TLR3O15455 904 aaKnown RBP9.84□□□□□ -0.83
CHL1-209ENST00000461289 F13A1P00488 732 aa9.84□□□□□ -0.83
CHL1-209ENST00000461289 LIG1P18858 919 aa9.84□□□□□ -0.83
CHL1-209ENST00000461289 DNAJA1P31689 397 aaKnown RBP9.84□□□□□ -0.83
CHL1-209ENST00000461289 SF3A1Q15459 793 aaKnown RBP9.84□□□□□ -0.83
CHL1-209ENST00000461289 GATAD2BQ8WXI9 593 aa9.84□□□□□ -0.83
CHL1-209ENST00000461289 UBP1Q9NZI7 540 aa9.84□□□□□ -0.83
CHL1-209ENST00000461289 USP21Q9UK80 565 aa9.84□□□□□ -0.83
CHL1-209ENST00000461289 SLFN14P0C7P3 912 aa9.83□□□□□ -0.84
CHL1-209ENST00000461289 SPATA31C1P0DKV0 1188 aa9.83□□□□□ -0.84
CHL1-209ENST00000461289 ARID5AQ03989 594 aa9.83□□□□□ -0.84
CHL1-209ENST00000461289 CWF19L2Q2TBE0 894 aaKnown RBP9.83□□□□□ -0.84
CHL1-209ENST00000461289 NUTM2GQ5VZR2 741 aa9.83□□□□□ -0.84
CHL1-209ENST00000461289 IGF2-ASQ6U949 168 aa9.83□□□□□ -0.84
CHL1-209ENST00000461289 MPRIPQ6WCQ1 1025 aa9.83□□□□□ -0.84
CHL1-209ENST00000461289 FAM196AQ6ZSG2 479 aa9.83□□□□□ -0.84
CHL1-209ENST00000461289 SREK1Q8WXA9 508 aaKnown RBP9.83□□□□□ -0.84
CHL1-209ENST00000461289 NT5C1AQ9BXI3 368 aa9.83□□□□□ -0.84
CHL1-209ENST00000461289 PICK1Q9NRD5 415 aa9.83□□□□□ -0.84
CHL1-209ENST00000461289 PPP1R1BQ9UD71 204 aaPredicted RBP9.83□□□□□ -0.84
CHL1-209ENST00000461289 APBA3O96018 575 aa9.82□□□□□ -0.84
CHL1-209ENST00000461289 CTSBP07858 339 aa9.82□□□□□ -0.84
CHL1-209ENST00000461289 GARTP22102 1010 aa9.82□□□□□ -0.84
CHL1-209ENST00000461289 LORP23490 312 aaPredicted RBP9.82□□□□□ -0.84
CHL1-209ENST00000461289 GJA8P48165 433 aa9.82□□□□□ -0.84
CHL1-209ENST00000461289 SEZ6Q53EL9 994 aa9.82□□□□□ -0.84
CHL1-209ENST00000461289 SLC43A3Q8NBI5 491 aa9.82□□□□□ -0.84
CHL1-209ENST00000461289 NKD1Q969G9 470 aa9.82□□□□□ -0.84
CHL1-209ENST00000461289 GAL3ST3Q96A11 431 aa9.82□□□□□ -0.84
CHL1-209ENST00000461289 ELMO3Q96BJ8 720 aa9.82□□□□□ -0.84
CHL1-209ENST00000461289 EAF1Q96JC9 268 aaPredicted RBP9.82□□□□□ -0.84
CHL1-209ENST00000461289 TANGO6Q9C0B7 1094 aa9.82□□□□□ -0.84
CHL1-209ENST00000461289 RNF208Q9H0X6 261 aa9.82□□□□□ -0.84
CHL1-209ENST00000461289 KCNQ5Q9NR82 932 aa9.82□□□□□ -0.84
CHL1-209ENST00000461289 ROBO2Q9HCK4 1378 aa9.81□□□□□ -0.84
CHL1-209ENST00000461289 GREM1O60565 184 aa9.81□□□□□ -0.84
CHL1-209ENST00000461289 MCM4P33991 863 aa9.81□□□□□ -0.84
CHL1-209ENST00000461289 PTPN11Q06124 597 aaPredicted RBP9.81□□□□□ -0.84
CHL1-209ENST00000461289 GRIK4Q16099 956 aa9.81□□□□□ -0.84
CHL1-209ENST00000461289 AKAP4Q5JQC9 854 aa9.81□□□□□ -0.84
CHL1-209ENST00000461289 EXOSC6Q5RKV6 272 aaKnown RBP9.81□□□□□ -0.84
CHL1-209ENST00000461289 NACC1Q96RE7 527 aa9.81□□□□□ -0.84
CHL1-209ENST00000461289 TM4SF5O14894 197 aa9.8□□□□□ -0.84
CHL1-209ENST00000461289 WISP1O95388 367 aa9.8□□□□□ -0.84
CHL1-209ENST00000461289 RPL6Q02878 288 aaKnown RBP9.8□□□□□ -0.84
CHL1-209ENST00000461289 MPP2Q14168 576 aa9.8□□□□□ -0.84
CHL1-209ENST00000461289 WIPI1Q5MNZ9 446 aaPredicted RBP9.8□□□□□ -0.84
CHL1-209ENST00000461289 FDX2Q6P4F2 183 aa9.8□□□□□ -0.84
CHL1-209ENST00000461289 HDXQ7Z353 690 aa9.8□□□□□ -0.84
CHL1-209ENST00000461289 FBXO27Q8NI29 283 aa9.8□□□□□ -0.84
CHL1-209ENST00000461289 CYP4F12Q9HCS2 524 aa9.8□□□□□ -0.84
CHL1-209ENST00000461289 EFR3BQ9Y2G0 817 aa9.8□□□□□ -0.84
CHL1-209ENST00000461289 ZNF862O60290 1169 aa9.79□□□□□ -0.84
CHL1-209ENST00000461289 AOC2O75106 756 aa9.79□□□□□ -0.84
CHL1-209ENST00000461289 CILPO75339 1184 aa9.79□□□□□ -0.84
CHL1-209ENST00000461289 DLGAP3O95886 979 aa9.79□□□□□ -0.84
CHL1-209ENST00000461289 SHISA2Q6UWI4 295 aa9.79□□□□□ -0.84
CHL1-209ENST00000461289 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.79□□□□□ -0.84
CHL1-209ENST00000461289 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.79□□□□□ -0.84
CHL1-209ENST00000461289 PRKAG2Q9UGJ0 569 aa9.79□□□□□ -0.84
CHL1-209ENST00000461289 AP4E1Q9UPM8 1137 aa9.79□□□□□ -0.84
CHL1-209ENST00000461289 FAM221AA4D161 298 aa9.78□□□□□ -0.84
CHL1-209ENST00000461289 CRKP46108 304 aa9.78□□□□□ -0.84
CHL1-209ENST00000461289 KIF4BQ2VIQ3 1234 aa9.78□□□□□ -0.84
CHL1-209ENST00000461289 KIAA1211Q6ZU35 1233 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms