RNA–Protein interactions for RNA: ENST00000461173.5

DHFR2-203, Transcript of dihydrofolate reductase 2, humanhuman

TSL 1 (best)

Gene DHFR2, Length 1,831 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR2-203ENST00000461173 RASGRF1Q13972 1273 aa11.48□□□□□ -0.57
DHFR2-203ENST00000461173 PPP2R5BQ15173 497 aa11.48□□□□□ -0.57
DHFR2-203ENST00000461173 STK38Q15208 465 aa11.48□□□□□ -0.57
DHFR2-203ENST00000461173 TMEM132AQ24JP5 1023 aa11.48□□□□□ -0.57
DHFR2-203ENST00000461173 SYNE3Q6ZMZ3 975 aa11.48□□□□□ -0.57
DHFR2-203ENST00000461173 IFNL3Q8IZI9 196 aa11.48□□□□□ -0.57
DHFR2-203ENST00000461173 TMTC2Q8N394 836 aa11.48□□□□□ -0.57
DHFR2-203ENST00000461173 STAG1Q8WVM7 1258 aa11.48□□□□□ -0.57
DHFR2-203ENST00000461173 MRFAP1L1Q96HT8 127 aa11.48□□□□□ -0.57
DHFR2-203ENST00000461173 TIGD1Q96MW7 591 aa11.48□□□□□ -0.57
DHFR2-203ENST00000461173 NAT10Q9H0A0 1025 aaKnown RBP11.48□□□□□ -0.57
DHFR2-203ENST00000461173 TTC12Q9H892 705 aaPredicted RBP11.48□□□□□ -0.57
DHFR2-203ENST00000461173 R3HCC1Q9Y3T6 440 aaKnown RBP11.48□□□□□ -0.57
DHFR2-203ENST00000461173 ZNF804BA4D1E1 1349 aa11.48□□□□□ -0.57
DHFR2-203ENST00000461173 BCL9LQ86UU0 1499 aa11.47□□□□□ -0.57
DHFR2-203ENST00000461173 ZBTB43O43298 467 aa11.47□□□□□ -0.57
DHFR2-203ENST00000461173 IGSF3O75054 1194 aa11.47□□□□□ -0.57
DHFR2-203ENST00000461173 NTRK3Q16288 839 aa11.47□□□□□ -0.57
DHFR2-203ENST00000461173 AKNAD1Q5T1N1 836 aa11.47□□□□□ -0.57
DHFR2-203ENST00000461173 CYB5R4Q7L1T6 521 aa11.47□□□□□ -0.57
DHFR2-203ENST00000461173 ELOA2Q8IYF1 753 aaPredicted RBP11.47□□□□□ -0.57
DHFR2-203ENST00000461173 JMYQ8N9B5 988 aa11.47□□□□□ -0.57
DHFR2-203ENST00000461173 WASF1Q92558 559 aa11.47□□□□□ -0.57
DHFR2-203ENST00000461173 NAPBQ9H115 298 aa11.47□□□□□ -0.57
DHFR2-203ENST00000461173 DNAJC25Q9H1X3 360 aa11.47□□□□□ -0.57
DHFR2-203ENST00000461173 RNF41Q9H4P4 317 aaPredicted RBP11.47□□□□□ -0.57
DHFR2-203ENST00000461173 LY9Q9HBG7 655 aa11.47□□□□□ -0.57
DHFR2-203ENST00000461173 BCORQ6W2J9 1755 aa11.47□□□□□ -0.57
DHFR2-203ENST00000461173 GOLGA6L19H0YKK7 550 aa11.46□□□□□ -0.57
DHFR2-203ENST00000461173 APPP05067 770 aa11.46□□□□□ -0.57
DHFR2-203ENST00000461173 U2AF2P26368 475 aaKnown RBP eCLIP11.46□□□□□ -0.57
DHFR2-203ENST00000461173 RBM6P78332 1123 aaKnown RBP11.46□□□□□ -0.57
DHFR2-203ENST00000461173 DHX8Q14562 1220 aaKnown RBP11.46□□□□□ -0.57
DHFR2-203ENST00000461173 SLC39A14Q15043 492 aa11.46□□□□□ -0.57
DHFR2-203ENST00000461173 SF3B3Q15393 1217 aaKnown RBP11.46□□□□□ -0.57
DHFR2-203ENST00000461173 SF3A1Q15459 793 aaKnown RBP11.46□□□□□ -0.57
DHFR2-203ENST00000461173 ANO1Q5XXA6 986 aa11.46□□□□□ -0.57
DHFR2-203ENST00000461173 CEP57L1Q8IYX8 460 aa11.46□□□□□ -0.57
DHFR2-203ENST00000461173 MARCH10Q8NA82 808 aaPredicted RBP11.46□□□□□ -0.57
DHFR2-203ENST00000461173 MAP7D2Q96T17 732 aa11.46□□□□□ -0.57
DHFR2-203ENST00000461173 KCNF1Q9H3M0 494 aa11.46□□□□□ -0.57
DHFR2-203ENST00000461173 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.46□□□□□ -0.57
DHFR2-203ENST00000461173 MORC2Q9Y6X9 1032 aaPredicted RBP11.46□□□□□ -0.57
DHFR2-203ENST00000461173 MYH14Q7Z406 1995 aaKnown RBP11.46□□□□□ -0.57
DHFR2-203ENST00000461173 MYO5AQ9Y4I1 1855 aaKnown RBP11.46□□□□□ -0.58
DHFR2-203ENST00000461173 COL5A3P25940 1745 aaPredicted RBP11.46□□□□□ -0.58
DHFR2-203ENST00000461173 GSG1L2A8MUP6 293 aa11.46□□□□□ -0.58
DHFR2-203ENST00000461173 PCP11498 1178 aaKnown RBP11.46□□□□□ -0.58
DHFR2-203ENST00000461173 IFNAR1P17181 557 aa11.46□□□□□ -0.58
DHFR2-203ENST00000461173 GTF2F1P35269 517 aaKnown RBP eCLIP11.46□□□□□ -0.58
DHFR2-203ENST00000461173 CEBPZQ03701 1054 aaKnown RBP11.46□□□□□ -0.58
DHFR2-203ENST00000461173 UBE4AQ14139 1066 aa11.46□□□□□ -0.58
DHFR2-203ENST00000461173 MTERF4Q7Z6M4 381 aaKnown RBP11.46□□□□□ -0.58
DHFR2-203ENST00000461173 MAGEB6Q8N7X4 407 aa11.46□□□□□ -0.58
DHFR2-203ENST00000461173 ALG1Q9BT22 464 aa11.46□□□□□ -0.58
DHFR2-203ENST00000461173 TRIM5Q9C035 493 aa11.46□□□□□ -0.58
DHFR2-203ENST00000461173 FTOQ9C0B1 505 aaKnown RBP eCLIP11.46□□□□□ -0.58
DHFR2-203ENST00000461173 EPB41L4AQ9HCS5 686 aaPredicted RBP11.46□□□□□ -0.58
DHFR2-203ENST00000461173 ANAPC4Q9UJX5 808 aa11.46□□□□□ -0.58
DHFR2-203ENST00000461173 PDS5AQ29RF7 1337 aaKnown RBP11.46□□□□□ -0.58
DHFR2-203ENST00000461173 CCDC196A0A1B0GTZ2 297 aa11.45□□□□□ -0.58
DHFR2-203ENST00000461173 B4E1Z4 1266 aa11.45□□□□□ -0.58
DHFR2-203ENST00000461173 MBD4O95243 580 aa11.45□□□□□ -0.58
DHFR2-203ENST00000461173 IARSP41252 1262 aaKnown RBP11.45□□□□□ -0.58
DHFR2-203ENST00000461173 GUCY1B3Q02153 619 aa11.45□□□□□ -0.58
DHFR2-203ENST00000461173 ITPK1Q13572 414 aa11.45□□□□□ -0.58
DHFR2-203ENST00000461173 SART3Q15020 963 aaKnown RBP11.45□□□□□ -0.58
DHFR2-203ENST00000461173 TMEM67Q5HYA8 995 aa11.45□□□□□ -0.58
DHFR2-203ENST00000461173 SLC10A5Q5PT55 438 aa11.45□□□□□ -0.58
DHFR2-203ENST00000461173 AXDND1Q5T1B0 1012 aaPredicted RBP11.45□□□□□ -0.58
DHFR2-203ENST00000461173 MFSD6Q6ZSS7 791 aa11.45□□□□□ -0.58
DHFR2-203ENST00000461173 MYRIPQ8NFW9 859 aa11.45□□□□□ -0.58
DHFR2-203ENST00000461173 FAM217BQ9NTX9 383 aaPredicted RBP11.45□□□□□ -0.58
DHFR2-203ENST00000461173 GNL3LQ9NVN8 582 aaKnown RBP11.45□□□□□ -0.58
DHFR2-203ENST00000461173 KIAA1468Q9P260 1216 aa11.45□□□□□ -0.58
DHFR2-203ENST00000461173 NIP7Q9Y221 180 aaKnown RBP eCLIP11.45□□□□□ -0.58
DHFR2-203ENST00000461173 NEDD4P46934 1319 aa11.45□□□□□ -0.58
DHFR2-203ENST00000461173 CHD4Q14839 1912 aa11.45□□□□□ -0.58
DHFR2-203ENST00000461173 SEMA3EO15041 775 aa11.44□□□□□ -0.58
DHFR2-203ENST00000461173 FMNL1O95466 1100 aaPredicted RBP11.44□□□□□ -0.58
DHFR2-203ENST00000461173 NT5C2P49902 561 aa11.44□□□□□ -0.58
DHFR2-203ENST00000461173 CHRNDQ07001 517 aa11.44□□□□□ -0.58
DHFR2-203ENST00000461173 ZNF830Q96NB3 372 aaPredicted RBP11.44□□□□□ -0.58
DHFR2-203ENST00000461173 NOL10Q9BSC4 688 aaKnown RBP11.44□□□□□ -0.58
DHFR2-203ENST00000461173 SEC31BQ9NQW1 1179 aa11.44□□□□□ -0.58
DHFR2-203ENST00000461173 BSDC1Q9NW68 430 aaPredicted RBP11.44□□□□□ -0.58
DHFR2-203ENST00000461173 ZSWIM5Q9P217 1185 aa11.44□□□□□ -0.58
DHFR2-203ENST00000461173 SLC12A7Q9Y666 1083 aa11.44□□□□□ -0.58
DHFR2-203ENST00000461173 CLIC4Q9Y696 253 aa11.44□□□□□ -0.58
DHFR2-203ENST00000461173 CNTNAP4Q9C0A0 1308 aa11.44□□□□□ -0.58
DHFR2-203ENST00000461173 LTBP4Q8N2S1 1624 aa11.44□□□□□ -0.58
DHFR2-203ENST00000461173 UQCRHLA0A096LP55 91 aa11.44□□□□□ -0.58
DHFR2-203ENST00000461173 GOLGA8AA7E2F4 631 aa11.44□□□□□ -0.58
DHFR2-203ENST00000461173 BECN2A8MW95 431 aa11.44□□□□□ -0.58
DHFR2-203ENST00000461173 UQCRHP07919 91 aa11.44□□□□□ -0.58
DHFR2-203ENST00000461173 CDC27P30260 824 aa11.44□□□□□ -0.58
DHFR2-203ENST00000461173 NDUFA8P51970 172 aa11.44□□□□□ -0.58
DHFR2-203ENST00000461173 KRT40Q6A162 431 aa11.44□□□□□ -0.58
DHFR2-203ENST00000461173 VPS37DQ86XT2 251 aa11.44□□□□□ -0.58
DHFR2-203ENST00000461173 DHX40Q8IX18 779 aaKnown RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms