RNA–Protein interactions for RNA: ENST00000461132.1

SPTLC1-203, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 808 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-203ENST00000461132 ARHGAP27Q6ZUM4 889 aa6.57□□□□□ -1.36
SPTLC1-203ENST00000461132 STK11IPQ8N1F8 1099 aa6.57□□□□□ -1.36
SPTLC1-203ENST00000461132 BIN1O00499 593 aa6.56□□□□□ -1.36
SPTLC1-203ENST00000461132 CTSBP07858 339 aa6.56□□□□□ -1.36
SPTLC1-203ENST00000461132 ITPKAP23677 461 aa6.56□□□□□ -1.36
SPTLC1-203ENST00000461132 PTPN12Q05209 780 aaKnown RBP6.56□□□□□ -1.36
SPTLC1-203ENST00000461132 ORC1Q13415 861 aa6.56□□□□□ -1.36
SPTLC1-203ENST00000461132 PLCL1Q15111 1095 aa6.56□□□□□ -1.36
SPTLC1-203ENST00000461132 CITED4Q96RK1 184 aa6.56□□□□□ -1.36
SPTLC1-203ENST00000461132 TRIM56Q9BRZ2 755 aaKnown RBP6.56□□□□□ -1.36
SPTLC1-203ENST00000461132 ATXN3LQ9H3M9 355 aa6.56□□□□□ -1.36
SPTLC1-203ENST00000461132 ECEL1O95672 775 aa6.55□□□□□ -1.36
SPTLC1-203ENST00000461132 SERPINB4P48594 390 aa6.55□□□□□ -1.36
SPTLC1-203ENST00000461132 PDE4CQ08493 712 aa6.55□□□□□ -1.36
SPTLC1-203ENST00000461132 OGFOD3Q6PK18 319 aa6.55□□□□□ -1.36
SPTLC1-203ENST00000461132 WDR18Q9BV38 432 aa6.55□□□□□ -1.36
SPTLC1-203ENST00000461132 DNAJC25Q9H1X3 360 aa6.55□□□□□ -1.36
SPTLC1-203ENST00000461132 PPP2R3AQ06190 1150 aa6.54□□□□□ -1.36
SPTLC1-203ENST00000461132 RPS26P11Q5JNZ5 115 aaPredicted RBP6.54□□□□□ -1.36
SPTLC1-203ENST00000461132 DTHD1Q6ZMT9 781 aa6.54□□□□□ -1.36
SPTLC1-203ENST00000461132 GATA6Q92908 595 aa6.54□□□□□ -1.36
SPTLC1-203ENST00000461132 CCDC74AQ96AQ1 378 aa6.54□□□□□ -1.36
SPTLC1-203ENST00000461132 MISP3Q96FF7 219 aa6.54□□□□□ -1.36
SPTLC1-203ENST00000461132 ZC3H12CQ9C0D7 883 aaKnown RBP6.54□□□□□ -1.36
SPTLC1-203ENST00000461132 SSU72Q9NP77 194 aaKnown RBP6.54□□□□□ -1.36
SPTLC1-203ENST00000461132 PAK6Q9NQU5 681 aaPredicted RBP6.54□□□□□ -1.36
SPTLC1-203ENST00000461132 GPN3Q9UHW5 284 aaPredicted RBP6.54□□□□□ -1.36
SPTLC1-203ENST00000461132 SYNGAP1Q96PV0 1343 aa6.53□□□□□ -1.36
SPTLC1-203ENST00000461132 RNGTTO60942 597 aaKnown RBP6.53□□□□□ -1.36
SPTLC1-203ENST00000461132 LIG1P18858 919 aa6.53□□□□□ -1.36
SPTLC1-203ENST00000461132 ZNF157P51786 506 aaPredicted RBP6.53□□□□□ -1.36
SPTLC1-203ENST00000461132 ID3Q02535 119 aa6.53□□□□□ -1.36
SPTLC1-203ENST00000461132 FZD5Q13467 585 aa6.53□□□□□ -1.36
SPTLC1-203ENST00000461132 OGFOD2Q6N063 350 aa6.53□□□□□ -1.36
SPTLC1-203ENST00000461132 CBLL1Q75N03 491 aa6.53□□□□□ -1.36
SPTLC1-203ENST00000461132 RETREG2Q8NC44 543 aa6.53□□□□□ -1.36
SPTLC1-203ENST00000461132 NIF3L1Q9GZT8 377 aa6.53□□□□□ -1.36
SPTLC1-203ENST00000461132 C1GALT1Q9NS00 363 aa6.53□□□□□ -1.36
SPTLC1-203ENST00000461132 NLRP2Q9NX02 1062 aa6.53□□□□□ -1.36
SPTLC1-203ENST00000461132 TMEM238LA0A1B0GVL6 79 aa6.52□□□□□ -1.37
SPTLC1-203ENST00000461132 EIF1AYO14602 144 aaKnown RBP6.52□□□□□ -1.37
SPTLC1-203ENST00000461132 FAM87AP0C7U9 286 aa6.52□□□□□ -1.37
SPTLC1-203ENST00000461132 PRPF40BQ6NWY9 871 aaKnown RBP6.52□□□□□ -1.37
SPTLC1-203ENST00000461132 FAM129BQ96TA1 746 aa6.52□□□□□ -1.37
SPTLC1-203ENST00000461132 GSX1Q9H4S2 264 aaPredicted RBP6.52□□□□□ -1.37
SPTLC1-203ENST00000461132 ABCB6Q9NP58 842 aa6.52□□□□□ -1.37
SPTLC1-203ENST00000461132 PPP1R9AQ9ULJ8 1098 aa6.52□□□□□ -1.37
SPTLC1-203ENST00000461132 TMPRSS2O15393 492 aa6.51□□□□□ -1.37
SPTLC1-203ENST00000461132 CDK5R2Q13319 367 aa6.51□□□□□ -1.37
SPTLC1-203ENST00000461132 SMYD4Q8IYR2 804 aaPredicted RBP6.51□□□□□ -1.37
SPTLC1-203ENST00000461132 NETO1Q8TDF5 533 aa6.51□□□□□ -1.37
SPTLC1-203ENST00000461132 BCL7CQ8WUZ0 217 aaPredicted RBP6.51□□□□□ -1.37
SPTLC1-203ENST00000461132 KCNB2Q92953 911 aa6.51□□□□□ -1.37
SPTLC1-203ENST00000461132 DMRTB1Q96MA1 342 aa6.51□□□□□ -1.37
SPTLC1-203ENST00000461132 KRTAP9-9Q9BYP9 154 aa6.51□□□□□ -1.37
SPTLC1-203ENST00000461132 KRTAP9-4Q9BYQ2 154 aa6.51□□□□□ -1.37
SPTLC1-203ENST00000461132 DYNC1LI2O43237 492 aaPredicted RBP6.5□□□□□ -1.37
SPTLC1-203ENST00000461132 GSTP1P09211 210 aaKnown RBP6.5□□□□□ -1.37
SPTLC1-203ENST00000461132 ARHGAP4P98171 946 aa6.5□□□□□ -1.37
SPTLC1-203ENST00000461132 SEZ6L2Q6UXD5 910 aa6.5□□□□□ -1.37
SPTLC1-203ENST00000461132 CCER1Q8TC90 406 aaPredicted RBP6.5□□□□□ -1.37
SPTLC1-203ENST00000461132 FANCD2OSQ96PS1 177 aa6.5□□□□□ -1.37
SPTLC1-203ENST00000461132 CCDC86Q9H6F5 360 aaKnown RBP6.5□□□□□ -1.37
SPTLC1-203ENST00000461132 TMEM39AQ9NV64 488 aa6.5□□□□□ -1.37
SPTLC1-203ENST00000461132 CRIM1Q9NZV1 1036 aa6.5□□□□□ -1.37
SPTLC1-203ENST00000461132 ITGB5P18084 799 aa6.49□□□□□ -1.37
SPTLC1-203ENST00000461132 FCGRTP55899 365 aa6.49□□□□□ -1.37
SPTLC1-203ENST00000461132 GRM2Q14416 872 aa6.49□□□□□ -1.37
SPTLC1-203ENST00000461132 ZNF792Q3KQV3 632 aa6.49□□□□□ -1.37
SPTLC1-203ENST00000461132 ZNF574Q6ZN55 896 aaPredicted RBP6.49□□□□□ -1.37
SPTLC1-203ENST00000461132 NFXL1Q6ZNB6 911 aa6.49□□□□□ -1.37
SPTLC1-203ENST00000461132 CSRNP1Q96S65 589 aa6.49□□□□□ -1.37
SPTLC1-203ENST00000461132 PICK1Q9NRD5 415 aa6.49□□□□□ -1.37
SPTLC1-203ENST00000461132 KRT82Q9NSB4 513 aa6.49□□□□□ -1.37
SPTLC1-203ENST00000461132 PCOLCE2Q9UKZ9 415 aa6.49□□□□□ -1.37
SPTLC1-203ENST00000461132 XRCC5P13010 732 aaKnown RBP6.48□□□□□ -1.37
SPTLC1-203ENST00000461132 HCLS1P14317 486 aaPredicted RBP6.48□□□□□ -1.37
SPTLC1-203ENST00000461132 TTLL4Q14679 1199 aa6.48□□□□□ -1.37
SPTLC1-203ENST00000461132 POU5F2Q8N7G0 328 aa6.48□□□□□ -1.37
SPTLC1-203ENST00000461132 WDR89Q96FK6 387 aaPredicted RBP6.48□□□□□ -1.37
SPTLC1-203ENST00000461132 ACSBG1Q96GR2 724 aa6.48□□□□□ -1.37
SPTLC1-203ENST00000461132 GPR182O15218 404 aa6.47□□□□□ -1.37
SPTLC1-203ENST00000461132 C8AP07357 584 aa6.47□□□□□ -1.37
SPTLC1-203ENST00000461132 BNIP3Q12983 259 aa6.47□□□□□ -1.37
SPTLC1-203ENST00000461132 PKN1Q16512 942 aa6.47□□□□□ -1.37
SPTLC1-203ENST00000461132 IFI16Q16666 785 aaKnown RBP6.47□□□□□ -1.37
SPTLC1-203ENST00000461132 KIF4BQ2VIQ3 1234 aa6.47□□□□□ -1.37
SPTLC1-203ENST00000461132 PLD6Q8N2A8 252 aaKnown RBP6.47□□□□□ -1.37
SPTLC1-203ENST00000461132 FAM181AQ8N9Y4 354 aa6.47□□□□□ -1.37
SPTLC1-203ENST00000461132 PI4K2BQ8TCG2 481 aa6.47□□□□□ -1.37
SPTLC1-203ENST00000461132 HRASLS5Q96KN8 279 aa6.47□□□□□ -1.37
SPTLC1-203ENST00000461132 EMILIN2Q9BXX0 1053 aa6.47□□□□□ -1.37
SPTLC1-203ENST00000461132 RC3H2Q9HBD1 1191 aaKnown RBP6.47□□□□□ -1.37
SPTLC1-203ENST00000461132 VAV3Q9UKW4 847 aa6.47□□□□□ -1.37
SPTLC1-203ENST00000461132 AKAP2Q9Y2D5 859 aa6.47□□□□□ -1.37
SPTLC1-203ENST00000461132 ZNF862O60290 1169 aa6.46□□□□□ -1.38
SPTLC1-203ENST00000461132 PRKCQQ04759 706 aa6.46□□□□□ -1.38
SPTLC1-203ENST00000461132 FAAP100Q0VG06 881 aa6.46□□□□□ -1.38
SPTLC1-203ENST00000461132 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.46□□□□□ -1.38
SPTLC1-203ENST00000461132 EPS8L3Q8TE67 593 aaKnown RBP6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms