RNA–Protein interactions for RNA: ENST00000461056.5

SND1-202, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-202ENST00000461056 SKAP1Q86WV1 359 aa9.95□□□□□ -0.82
SND1-202ENST00000461056 SMC1BQ8NDV3 1235 aa9.95□□□□□ -0.82
SND1-202ENST00000461056 SPDYE1Q8NFV5 336 aaPredicted RBP9.95□□□□□ -0.82
SND1-202ENST00000461056 TEKT1Q969V4 418 aa9.95□□□□□ -0.82
SND1-202ENST00000461056 TEPSINQ96N21 525 aa9.95□□□□□ -0.82
SND1-202ENST00000461056 ZNF70Q9UC06 446 aaPredicted RBP9.95□□□□□ -0.82
SND1-202ENST00000461056 ABCF2Q9UG63 623 aa9.95□□□□□ -0.82
SND1-202ENST00000461056 HDAC9Q9UKV0 1011 aa9.95□□□□□ -0.82
SND1-202ENST00000461056 ATRNL1Q5VV63 1379 aa9.95□□□□□ -0.82
SND1-202ENST00000461056 PCNTO95613 3336 aa9.94□□□□□ -0.82
SND1-202ENST00000461056 ADM5C9JUS6 153 aa9.94□□□□□ -0.82
SND1-202ENST00000461056 TRAF5O00463 557 aa9.94□□□□□ -0.82
SND1-202ENST00000461056 WDHD1O75717 1129 aaPredicted RBP9.94□□□□□ -0.82
SND1-202ENST00000461056 GSPT1P15170 499 aaKnown RBP9.94□□□□□ -0.82
SND1-202ENST00000461056 NFIAQ12857 509 aa9.94□□□□□ -0.82
SND1-202ENST00000461056 SLFNL1Q499Z3 407 aa9.94□□□□□ -0.82
SND1-202ENST00000461056 RBM26Q5T8P6 1007 aaKnown RBP9.94□□□□□ -0.82
SND1-202ENST00000461056 ERICH6Q7L0X2 663 aa9.94□□□□□ -0.82
SND1-202ENST00000461056 CDAN1Q8IWY9 1227 aa9.94□□□□□ -0.82
SND1-202ENST00000461056 CNTROBQ8N137 903 aa9.94□□□□□ -0.82
SND1-202ENST00000461056 KBTBD3Q8NAB2 608 aa9.94□□□□□ -0.82
SND1-202ENST00000461056 DNAJC2Q99543 621 aaKnown RBP9.94□□□□□ -0.82
SND1-202ENST00000461056 RIOK1Q9BRS2 568 aaKnown RBP9.94□□□□□ -0.82
SND1-202ENST00000461056 IDI2Q9BXS1 227 aa9.94□□□□□ -0.82
SND1-202ENST00000461056 GLIS2Q9BZE0 524 aaPredicted RBP9.94□□□□□ -0.82
SND1-202ENST00000461056 FAM198AQ9UFP1 575 aa9.94□□□□□ -0.82
SND1-202ENST00000461056 RPAP1Q9BWH6 1393 aaPredicted RBP9.93□□□□□ -0.82
SND1-202ENST00000461056 ADD2P35612 726 aa9.93□□□□□ -0.82
SND1-202ENST00000461056 TTF1Q15361 905 aaPredicted RBP9.93□□□□□ -0.82
SND1-202ENST00000461056 TDRD3Q9H7E2 651 aaKnown RBP9.93□□□□□ -0.82
SND1-202ENST00000461056 DDX4Q9NQI0 724 aaKnown RBP9.93□□□□□ -0.82
SND1-202ENST00000461056 PPP4R2Q9NY27 417 aa9.93□□□□□ -0.82
SND1-202ENST00000461056 LRP2BPQ9P2M1 347 aa9.93□□□□□ -0.82
SND1-202ENST00000461056 MKRN1Q9UHC7 482 aaKnown RBP9.93□□□□□ -0.82
SND1-202ENST00000461056 COL2A1P02458 1487 aaPredicted RBP9.92□□□□□ -0.82
SND1-202ENST00000461056 MYH13Q9UKX3 1938 aa9.92□□□□□ -0.82
SND1-202ENST00000461056 CLRN2A0PK11 232 aa9.92□□□□□ -0.82
SND1-202ENST00000461056 ERC2O15083 957 aa9.92□□□□□ -0.82
SND1-202ENST00000461056 IDH1O75874 414 aaKnown RBP9.92□□□□□ -0.82
SND1-202ENST00000461056 NEFLP07196 543 aa9.92□□□□□ -0.82
SND1-202ENST00000461056 BTDP43251 543 aa9.92□□□□□ -0.82
SND1-202ENST00000461056 CACNB3P54284 484 aa9.92□□□□□ -0.82
SND1-202ENST00000461056 C1QTNF8P60827 252 aa9.92□□□□□ -0.82
SND1-202ENST00000461056 GSTO1P78417 241 aa9.92□□□□□ -0.82
SND1-202ENST00000461056 UBE3CQ15386 1083 aa9.92□□□□□ -0.82
SND1-202ENST00000461056 CST9Q5W186 159 aa9.92□□□□□ -0.82
SND1-202ENST00000461056 NAA16Q6N069 864 aaPredicted RBP9.92□□□□□ -0.82
SND1-202ENST00000461056 CDC37L1Q7L3B6 337 aa9.92□□□□□ -0.82
SND1-202ENST00000461056 SH3BP5LQ7L8J4 393 aa9.92□□□□□ -0.82
SND1-202ENST00000461056 KRT26Q7Z3Y9 468 aa9.92□□□□□ -0.82
SND1-202ENST00000461056 USP48Q86UV5 1035 aa9.92□□□□□ -0.82
SND1-202ENST00000461056 TICAM2Q86XR7 235 aa9.92□□□□□ -0.82
SND1-202ENST00000461056 DZIP1Q86YF9 867 aaKnown RBP9.92□□□□□ -0.82
SND1-202ENST00000461056 GPATCH3Q96I76 525 aa9.92□□□□□ -0.82
SND1-202ENST00000461056 RAI14Q9P0K7 980 aa9.92□□□□□ -0.82
SND1-202ENST00000461056 SCAF8Q9UPN6 1271 aaKnown RBP9.92□□□□□ -0.82
SND1-202ENST00000461056 ZNF532Q9HCE3 1301 aa9.91□□□□□ -0.82
SND1-202ENST00000461056 FOXP2O15409 715 aa9.91□□□□□ -0.82
SND1-202ENST00000461056 MAP4K4O95819 1239 aaPredicted RBP9.91□□□□□ -0.82
SND1-202ENST00000461056 CYP7A1P22680 504 aa9.91□□□□□ -0.82
SND1-202ENST00000461056 DYNLL1P63167 89 aaKnown RBP9.91□□□□□ -0.82
SND1-202ENST00000461056 MAP3K12Q12852 859 aa9.91□□□□□ -0.82
SND1-202ENST00000461056 TTC22Q5TAA0 569 aa9.91□□□□□ -0.82
SND1-202ENST00000461056 SLC9C2Q5TAH2 1124 aa9.91□□□□□ -0.82
SND1-202ENST00000461056 FAM83AQ86UY5 434 aa9.91□□□□□ -0.82
SND1-202ENST00000461056 APOBEC3FQ8IUX4 373 aaKnown RBP9.91□□□□□ -0.82
SND1-202ENST00000461056 ZFPM1Q8IX07 1006 aa9.91□□□□□ -0.82
SND1-202ENST00000461056 MAGEB6Q8N7X4 407 aa9.91□□□□□ -0.82
SND1-202ENST00000461056 SH3RF3Q8TEJ3 882 aaPredicted RBP9.91□□□□□ -0.82
SND1-202ENST00000461056 OSBP2Q969R2 916 aa9.91□□□□□ -0.82
SND1-202ENST00000461056 CDCA5Q96FF9 252 aa9.91□□□□□ -0.82
SND1-202ENST00000461056 DEFB129Q9H1M3 183 aa9.91□□□□□ -0.82
SND1-202ENST00000461056 PPP2R3BQ9Y5P8 575 aa9.91□□□□□ -0.82
SND1-202ENST00000461056 MAP3K10Q02779 954 aa9.9□□□□□ -0.82
SND1-202ENST00000461056 RASA3Q14644 834 aa9.9□□□□□ -0.82
SND1-202ENST00000461056 ZMYM1Q5SVZ6 1142 aa9.9□□□□□ -0.82
SND1-202ENST00000461056 SLF2Q8IX21 1173 aa9.9□□□□□ -0.82
SND1-202ENST00000461056 DCPSQ96C86 337 aaKnown RBP9.9□□□□□ -0.82
SND1-202ENST00000461056 CCDC136Q96JN2 1154 aa9.9□□□□□ -0.82
SND1-202ENST00000461056 TMEM39BQ9GZU3 492 aa9.9□□□□□ -0.82
SND1-202ENST00000461056 PUS7LQ9H0K6 701 aaKnown RBP9.9□□□□□ -0.82
SND1-202ENST00000461056 BCL11AQ9H165 835 aa9.9□□□□□ -0.82
SND1-202ENST00000461056 USP40Q9NVE5 1235 aa9.9□□□□□ -0.82
SND1-202ENST00000461056 PAPPA2Q9BXP8 1791 aa9.9□□□□□ -0.82
SND1-202ENST00000461056 DDX60LQ5H9U9 1706 aaKnown RBP9.9□□□□□ -0.83
SND1-202ENST00000461056 RNF113AO15541 343 aaKnown RBP9.89□□□□□ -0.83
SND1-202ENST00000461056 ENTPD3O75355 529 aa9.89□□□□□ -0.83
SND1-202ENST00000461056 LDHCP07864 332 aa9.89□□□□□ -0.83
SND1-202ENST00000461056 RBM5P52756 815 aaKnown RBP eCLIP9.89□□□□□ -0.83
SND1-202ENST00000461056 PRAMEF18Q5VWM3 479 aa9.89□□□□□ -0.83
SND1-202ENST00000461056 METTL16Q86W50 562 aaKnown RBP9.89□□□□□ -0.83
SND1-202ENST00000461056 SULF1Q8IWU6 871 aa9.89□□□□□ -0.83
SND1-202ENST00000461056 LCORLQ8N3X6 602 aa9.89□□□□□ -0.83
SND1-202ENST00000461056 MIGA1Q8NAN2 632 aa9.89□□□□□ -0.83
SND1-202ENST00000461056 FAM151AQ8WW52 585 aa9.89□□□□□ -0.83
SND1-202ENST00000461056 EVI5LQ96CN4 794 aa9.89□□□□□ -0.83
SND1-202ENST00000461056 AATFQ9NY61 560 aaKnown RBP eCLIP9.89□□□□□ -0.83
SND1-202ENST00000461056 MYO5AQ9Y4I1 1855 aaKnown RBP9.89□□□□□ -0.83
SND1-202ENST00000461056 FLT1P17948 1338 aa9.88□□□□□ -0.83
SND1-202ENST00000461056 TCP10L2B9ZVM9 353 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms