RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 CEBPZQ03701 1054 aaKnown RBP10.24□□□□□ -0.77
HDAC3-202ENST00000459727 CCDC152Q4G0S7 254 aa10.24□□□□□ -0.77
HDAC3-202ENST00000459727 CCDC102BQ68D86 513 aa10.24□□□□□ -0.77
HDAC3-202ENST00000459727 TTLL5Q6EMB2 1281 aa10.24□□□□□ -0.77
HDAC3-202ENST00000459727 APOA5Q6Q788 366 aa10.24□□□□□ -0.77
HDAC3-202ENST00000459727 NFXL1Q6ZNB6 911 aa10.24□□□□□ -0.77
HDAC3-202ENST00000459727 DZIP3Q86Y13 1208 aaKnown RBP10.24□□□□□ -0.77
HDAC3-202ENST00000459727 ZNF34Q8IZ26 560 aa10.24□□□□□ -0.77
HDAC3-202ENST00000459727 PDCL2Q8N4E4 241 aa10.24□□□□□ -0.77
HDAC3-202ENST00000459727 CCDC112Q8NEF3 446 aa10.24□□□□□ -0.77
HDAC3-202ENST00000459727 ZNF830Q96NB3 372 aaPredicted RBP10.24□□□□□ -0.77
HDAC3-202ENST00000459727 PUS7LQ9H0K6 701 aaKnown RBP10.24□□□□□ -0.77
HDAC3-202ENST00000459727 OSBPL5Q9H0X9 879 aaPredicted RBP10.24□□□□□ -0.77
HDAC3-202ENST00000459727 NAPBQ9H115 298 aa10.24□□□□□ -0.77
HDAC3-202ENST00000459727 GOLPH3LQ9H4A5 285 aa10.24□□□□□ -0.77
HDAC3-202ENST00000459727 GREM2Q9H772 168 aa10.24□□□□□ -0.77
HDAC3-202ENST00000459727 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.24□□□□□ -0.77
HDAC3-202ENST00000459727 DACH1Q9UI36 760 aa10.24□□□□□ -0.77
HDAC3-202ENST00000459727 ASAP1Q9ULH1 1129 aa10.24□□□□□ -0.77
HDAC3-202ENST00000459727 PYCARDQ9ULZ3 195 aa10.24□□□□□ -0.77
HDAC3-202ENST00000459727 CEP131Q9UPN4 1083 aa10.24□□□□□ -0.77
HDAC3-202ENST00000459727 ZNF652Q9Y2D9 606 aa10.24□□□□□ -0.77
HDAC3-202ENST00000459727 GOLGA8AA7E2F4 631 aa10.23□□□□□ -0.77
HDAC3-202ENST00000459727 BMP15O95972 392 aa10.23□□□□□ -0.77
HDAC3-202ENST00000459727 XBP1P17861 261 aa10.23□□□□□ -0.77
HDAC3-202ENST00000459727 U2AF2P26368 475 aaKnown RBP eCLIP10.23□□□□□ -0.776e-7■■■■■ 29.6
HDAC3-202ENST00000459727 IGHMBP2P38935 993 aaKnown RBP10.23□□□□□ -0.77
HDAC3-202ENST00000459727 HAND2P61296 217 aa10.23□□□□□ -0.77
HDAC3-202ENST00000459727 SCARF1Q14162 830 aa10.23□□□□□ -0.77
HDAC3-202ENST00000459727 TMEM67Q5HYA8 995 aa10.23□□□□□ -0.77
HDAC3-202ENST00000459727 CT47A1Q5JQC4 288 aaPredicted RBP10.23□□□□□ -0.77
HDAC3-202ENST00000459727 POTEAQ6S8J7 498 aa10.23□□□□□ -0.77
HDAC3-202ENST00000459727 LRRC8AQ8IWT6 810 aa10.23□□□□□ -0.77
HDAC3-202ENST00000459727 SPATA5Q8NB90 893 aa10.23□□□□□ -0.77
HDAC3-202ENST00000459727 STAG1Q8WVM7 1258 aa10.23□□□□□ -0.77
HDAC3-202ENST00000459727 STRBPQ96SI9 672 aaKnown RBP10.23□□□□□ -0.77
HDAC3-202ENST00000459727 MPHOSPH8Q99549 860 aa10.23□□□□□ -0.77
HDAC3-202ENST00000459727 GNL3LQ9NVN8 582 aaKnown RBP10.23□□□□□ -0.77
HDAC3-202ENST00000459727 SLC12A7Q9Y666 1083 aa10.23□□□□□ -0.77
HDAC3-202ENST00000459727 NWD2Q9ULI1 1742 aa10.23□□□□□ -0.77
HDAC3-202ENST00000459727 ZNF532Q9HCE3 1301 aa10.23□□□□□ -0.77
HDAC3-202ENST00000459727 WNK3Q9BYP7 1800 aa10.23□□□□□ -0.77
HDAC3-202ENST00000459727 AHDC1Q5TGY3 1603 aaPredicted RBP10.22□□□□□ -0.77
HDAC3-202ENST00000459727 RREB1Q92766 1687 aa10.22□□□□□ -0.77
HDAC3-202ENST00000459727 C4AP0C0L4 1744 aa10.22□□□□□ -0.77
HDAC3-202ENST00000459727 C4BP0C0L5 1744 aa10.22□□□□□ -0.77
HDAC3-202ENST00000459727 LAMB2P55268 1798 aa10.22□□□□□ -0.77
HDAC3-202ENST00000459727 ITGB4P16144 1822 aa10.22□□□□□ -0.77
HDAC3-202ENST00000459727 TCRBV5S4A2TA0A5A2 114 aa10.22□□□□□ -0.77
HDAC3-202ENST00000459727 CTIFO43310 598 aaKnown RBP10.22□□□□□ -0.77
HDAC3-202ENST00000459727 ZNF202O95125 648 aa10.22□□□□□ -0.77
HDAC3-202ENST00000459727 CHGBP05060 677 aa10.22□□□□□ -0.77
HDAC3-202ENST00000459727 IFNAR1P17181 557 aa10.22□□□□□ -0.77
HDAC3-202ENST00000459727 SYKP43405 635 aa10.22□□□□□ -0.77
HDAC3-202ENST00000459727 SSRP1Q08945 709 aaKnown RBP10.22□□□□□ -0.77
HDAC3-202ENST00000459727 RILPL1Q5EBL4 403 aa10.22□□□□□ -0.77
HDAC3-202ENST00000459727 KANK3Q6NY19 840 aa10.22□□□□□ -0.77
HDAC3-202ENST00000459727 C11orf57Q6ZUT1 292 aaPredicted RBP10.22□□□□□ -0.77
HDAC3-202ENST00000459727 VPS37DQ86XT2 251 aa10.22□□□□□ -0.77
HDAC3-202ENST00000459727 DHX40Q8IX18 779 aaKnown RBP10.22□□□□□ -0.77
HDAC3-202ENST00000459727 SMARCC1Q92922 1105 aaPredicted RBP10.22□□□□□ -0.77
HDAC3-202ENST00000459727 UTP14AQ9BVJ6 771 aaKnown RBP10.22□□□□□ -0.77
HDAC3-202ENST00000459727 CCDC94Q9BW85 323 aaPredicted RBP10.22□□□□□ -0.77
HDAC3-202ENST00000459727 BTG4Q9NY30 223 aa10.22□□□□□ -0.77
HDAC3-202ENST00000459727 ZBTB22O15209 634 aa10.21□□□□□ -0.77
HDAC3-202ENST00000459727 FMNL1O95466 1100 aaPredicted RBP10.21□□□□□ -0.77
HDAC3-202ENST00000459727 TNNT1P13805 278 aa10.21□□□□□ -0.77
HDAC3-202ENST00000459727 GPTP24298 496 aa10.21□□□□□ -0.77
HDAC3-202ENST00000459727 NDUFA8P51970 172 aa10.21□□□□□ -0.77
HDAC3-202ENST00000459727 GUCY1B3Q02153 619 aa10.21□□□□□ -0.77
HDAC3-202ENST00000459727 HLFQ16534 295 aa10.21□□□□□ -0.77
HDAC3-202ENST00000459727 TPD52L1Q16890 204 aaPredicted RBP10.21□□□□□ -0.77
HDAC3-202ENST00000459727 AKNAD1Q5T1N1 836 aa10.21□□□□□ -0.77
HDAC3-202ENST00000459727 OLFM4Q6UX06 510 aa10.21□□□□□ -0.77
HDAC3-202ENST00000459727 MFSD6Q6ZSS7 791 aa10.21□□□□□ -0.77
HDAC3-202ENST00000459727 CHST3Q7LGC8 479 aa10.21□□□□□ -0.77
HDAC3-202ENST00000459727 TBC1D10CQ8IV04 446 aa10.21□□□□□ -0.77
HDAC3-202ENST00000459727 AOPEPQ8N6M6 819 aa10.21□□□□□ -0.77
HDAC3-202ENST00000459727 TRIML1Q8N9V2 468 aa10.21□□□□□ -0.77
HDAC3-202ENST00000459727 ZNF579Q8NAF0 562 aaKnown RBP10.21□□□□□ -0.77
HDAC3-202ENST00000459727 PYM1Q9BRP8 204 aaKnown RBP10.21□□□□□ -0.77
HDAC3-202ENST00000459727 FOXP1Q9H334 677 aaPredicted RBP10.21□□□□□ -0.77
HDAC3-202ENST00000459727 PIH1D3Q9NQM4 214 aaKnown RBP10.21□□□□□ -0.77
HDAC3-202ENST00000459727 CCDC87Q9NVE4 849 aa10.21□□□□□ -0.77
HDAC3-202ENST00000459727 TUBE1Q9UJT0 475 aa10.21□□□□□ -0.77
HDAC3-202ENST00000459727 DOCK2Q92608 1830 aa10.21□□□□□ -0.78
HDAC3-202ENST00000459727 PSDA5PKW4 1024 aaPredicted RBP10.2□□□□□ -0.78
HDAC3-202ENST00000459727 IFIT3O14879 490 aaKnown RBP10.2□□□□□ -0.78
HDAC3-202ENST00000459727 SEMA3EO15041 775 aa10.2□□□□□ -0.78
HDAC3-202ENST00000459727 DEXIO95424 95 aa10.2□□□□□ -0.78
HDAC3-202ENST00000459727 POLR3DP05423 398 aaPredicted RBP10.2□□□□□ -0.78
HDAC3-202ENST00000459727 CALM1P0DP23 149 aa10.2□□□□□ -0.78
HDAC3-202ENST00000459727 CALM2P0DP24 149 aa10.2□□□□□ -0.78
HDAC3-202ENST00000459727 CALM3P0DP25 149 aa10.2□□□□□ -0.78
HDAC3-202ENST00000459727 SKILP12757 684 aa10.2□□□□□ -0.78
HDAC3-202ENST00000459727 PFKFB1P16118 471 aa10.2□□□□□ -0.78
HDAC3-202ENST00000459727 SFPQP23246 707 aaKnown RBP eCLIP10.2□□□□□ -0.78
HDAC3-202ENST00000459727 PHKA1P46020 1223 aa10.2□□□□□ -0.78
HDAC3-202ENST00000459727 TDO2P48775 406 aa10.2□□□□□ -0.78
HDAC3-202ENST00000459727 FOSBP53539 338 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms