RNA–Protein interactions for RNA: ENST00000459670.2

NEDD9-205, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-205ENST00000459670 SYT17Q9BSW7 474 aa12.49□□□□□ -0.41
NEDD9-205ENST00000459670 MRIQ9BWK5 157 aa12.49□□□□□ -0.41
NEDD9-205ENST00000459670 TMX4Q9H1E5 349 aaPredicted RBP12.49□□□□□ -0.41
NEDD9-205ENST00000459670 TAOK3Q9H2K8 898 aa12.49□□□□□ -0.41
NEDD9-205ENST00000459670 ZSWIM6Q9HCJ5 1215 aa12.49□□□□□ -0.41
NEDD9-205ENST00000459670 DAGLAQ9Y4D2 1042 aa12.49□□□□□ -0.41
NEDD9-205ENST00000459670 PAPPA2Q9BXP8 1791 aa12.48□□□□□ -0.41
NEDD9-205ENST00000459670 MAGEB6P1A0A0J9YX57 407 aa12.48□□□□□ -0.41
NEDD9-205ENST00000459670 PATL2C9JE40 543 aaKnown RBP12.48□□□□□ -0.41
NEDD9-205ENST00000459670 FRAT2O75474 233 aaPredicted RBP12.48□□□□□ -0.41
NEDD9-205ENST00000459670 VIL1P09327 827 aaKnown RBP12.48□□□□□ -0.41
NEDD9-205ENST00000459670 GNAT2P19087 354 aa12.48□□□□□ -0.41
NEDD9-205ENST00000459670 HDLBPQ00341 1268 aaKnown RBP12.48□□□□□ -0.41
NEDD9-205ENST00000459670 TBC1D10CQ8IV04 446 aa12.48□□□□□ -0.41
NEDD9-205ENST00000459670 IFNL3Q8IZI9 196 aa12.48□□□□□ -0.41
NEDD9-205ENST00000459670 IPO9Q96P70 1041 aaKnown RBP12.48□□□□□ -0.41
NEDD9-205ENST00000459670 AGXT2Q9BYV1 514 aa12.48□□□□□ -0.41
NEDD9-205ENST00000459670 ALDH8A1Q9H2A2 487 aaPredicted RBP12.48□□□□□ -0.41
NEDD9-205ENST00000459670 ANAPC4Q9UJX5 808 aa12.48□□□□□ -0.41
NEDD9-205ENST00000459670 USP17L3A6NCW0 530 aa12.47□□□□□ -0.41
NEDD9-205ENST00000459670 USP17L4A6NCW7 530 aa12.47□□□□□ -0.41
NEDD9-205ENST00000459670 FGRP09769 529 aa12.47□□□□□ -0.41
NEDD9-205ENST00000459670 RASSF7Q02833 373 aa12.47□□□□□ -0.41
NEDD9-205ENST00000459670 HHIPL2Q6UWX4 724 aa12.47□□□□□ -0.41
NEDD9-205ENST00000459670 USP17L1Q7RTZ2 530 aa12.47□□□□□ -0.41
NEDD9-205ENST00000459670 DZIP1Q86YF9 867 aaKnown RBP12.47□□□□□ -0.41
NEDD9-205ENST00000459670 MB21D2Q8IYB1 491 aaPredicted RBP12.47□□□□□ -0.41
NEDD9-205ENST00000459670 FBXL16Q8N461 479 aa12.47□□□□□ -0.41
NEDD9-205ENST00000459670 ZBED3Q96IU2 234 aaPredicted RBP12.47□□□□□ -0.41
NEDD9-205ENST00000459670 DCP1AQ9NPI6 582 aaPredicted RBP12.47□□□□□ -0.41
NEDD9-205ENST00000459670 BCS1LQ9Y276 419 aa12.47□□□□□ -0.41
NEDD9-205ENST00000459670 MYO3BQ8WXR4 1341 aa12.46□□□□□ -0.41
NEDD9-205ENST00000459670 SMIM22K7EJ46 135 aa12.46□□□□□ -0.41
NEDD9-205ENST00000459670 FZD9O00144 591 aa12.46□□□□□ -0.41
NEDD9-205ENST00000459670 GSTO1P78417 241 aa12.46□□□□□ -0.41
NEDD9-205ENST00000459670 APOBEC3HQ6NTF7 200 aaKnown RBP12.46□□□□□ -0.41
NEDD9-205ENST00000459670 CERS3Q8IU89 383 aa12.46□□□□□ -0.41
NEDD9-205ENST00000459670 SDR42E1Q8WUS8 393 aa12.46□□□□□ -0.41
NEDD9-205ENST00000459670 AATFQ9NY61 560 aaKnown RBP eCLIP12.46□□□□□ -0.41
NEDD9-205ENST00000459670 ZNRF3Q9ULT6 936 aa12.46□□□□□ -0.41
NEDD9-205ENST00000459670 E7EWF7 191 aa12.45□□□□□ -0.42
NEDD9-205ENST00000459670 PSMD14O00487 310 aa12.45□□□□□ -0.42
NEDD9-205ENST00000459670 WDHD1O75717 1129 aaPredicted RBP12.45□□□□□ -0.42
NEDD9-205ENST00000459670 YBX3P16989 372 aaKnown RBP eCLIP12.45□□□□□ -0.42
NEDD9-205ENST00000459670 DDIT3P35638 169 aa12.45□□□□□ -0.42
NEDD9-205ENST00000459670 BTDP43251 543 aa12.45□□□□□ -0.42
NEDD9-205ENST00000459670 ANTXR2P58335 489 aa12.45□□□□□ -0.42
NEDD9-205ENST00000459670 EXOSC10Q01780 885 aaKnown RBP12.45□□□□□ -0.42
NEDD9-205ENST00000459670 EVX2Q03828 476 aa12.45□□□□□ -0.42
NEDD9-205ENST00000459670 SBK1Q52WX2 424 aa12.45□□□□□ -0.42
NEDD9-205ENST00000459670 RSBN1LQ6PCB5 846 aaPredicted RBP12.45□□□□□ -0.42
NEDD9-205ENST00000459670 LARGE2Q8N3Y3 721 aa12.45□□□□□ -0.42
NEDD9-205ENST00000459670 SH3RF3Q8TEJ3 882 aaPredicted RBP12.45□□□□□ -0.42
NEDD9-205ENST00000459670 DDRGK1Q96HY6 314 aa12.45□□□□□ -0.42
NEDD9-205ENST00000459670 ZDHHC15Q96MV8 337 aa12.45□□□□□ -0.42
NEDD9-205ENST00000459670 UPF3BQ9BZI7 483 aaKnown RBP12.45□□□□□ -0.42
NEDD9-205ENST00000459670 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.45□□□□□ -0.42
NEDD9-205ENST00000459670 SLC4A4Q9Y6R1 1079 aa12.45□□□□□ -0.42
NEDD9-205ENST00000459670 ATAD5Q96QE3 1844 aa12.44□□□□□ -0.42
NEDD9-205ENST00000459670 FLT1P17948 1338 aa12.44□□□□□ -0.42
NEDD9-205ENST00000459670 NEDD4P46934 1319 aa12.44□□□□□ -0.42
NEDD9-205ENST00000459670 WDR19Q8NEZ3 1342 aa12.44□□□□□ -0.42
NEDD9-205ENST00000459670 LDHCP07864 332 aa12.44□□□□□ -0.42
NEDD9-205ENST00000459670 CPA1P15085 419 aa12.44□□□□□ -0.42
NEDD9-205ENST00000459670 RPS6KB1P23443 525 aa12.44□□□□□ -0.42
NEDD9-205ENST00000459670 CXCL9Q07325 125 aa12.44□□□□□ -0.42
NEDD9-205ENST00000459670 ST3GAL1Q11201 340 aa12.44□□□□□ -0.42
NEDD9-205ENST00000459670 KRT32Q14532 448 aa12.44□□□□□ -0.42
NEDD9-205ENST00000459670 RNF20Q5VTR2 975 aa12.44□□□□□ -0.42
NEDD9-205ENST00000459670 RUFY3Q7L099 469 aa12.44□□□□□ -0.42
NEDD9-205ENST00000459670 MTMR14Q8NCE2 650 aa12.44□□□□□ -0.42
NEDD9-205ENST00000459670 STAG1Q8WVM7 1258 aa12.44□□□□□ -0.42
NEDD9-205ENST00000459670 JAKMIP1Q96N16 626 aaKnown RBP12.44□□□□□ -0.42
NEDD9-205ENST00000459670 ATP8A2Q9NTI2 1148 aa12.44□□□□□ -0.42
NEDD9-205ENST00000459670 PPP1R1BQ9UD71 204 aaPredicted RBP12.44□□□□□ -0.42
NEDD9-205ENST00000459670 CTNNA3Q9UI47 895 aa12.44□□□□□ -0.42
NEDD9-205ENST00000459670 SERPINA10Q9UK55 444 aa12.44□□□□□ -0.42
NEDD9-205ENST00000459670 TTF2Q9UNY4 1162 aaKnown RBP12.44□□□□□ -0.42
NEDD9-205ENST00000459670 PCDHAC2Q9Y5I4 1007 aa12.44□□□□□ -0.42
NEDD9-205ENST00000459670 NPM3O75607 178 aaKnown RBP12.43□□□□□ -0.42
NEDD9-205ENST00000459670 ZKSCAN1P17029 563 aaPredicted RBP12.43□□□□□ -0.42
NEDD9-205ENST00000459670 CASTP20810 708 aaKnown RBP12.43□□□□□ -0.42
NEDD9-205ENST00000459670 CRKP46108 304 aa12.43□□□□□ -0.42
NEDD9-205ENST00000459670 CUL4AQ13619 759 aa12.43□□□□□ -0.42
NEDD9-205ENST00000459670 TOB2Q14106 344 aaPredicted RBP12.43□□□□□ -0.42
NEDD9-205ENST00000459670 CTR9Q6PD62 1173 aa12.43□□□□□ -0.42
NEDD9-205ENST00000459670 NIM1KQ8IY84 436 aa12.43□□□□□ -0.42
NEDD9-205ENST00000459670 CRNKL1Q9BZJ0 848 aaKnown RBP12.43□□□□□ -0.42
NEDD9-205ENST00000459670 DDX4Q9NQI0 724 aaKnown RBP12.43□□□□□ -0.42
NEDD9-205ENST00000459670 NID2Q14112 1375 aa12.43□□□□□ -0.42
NEDD9-205ENST00000459670 ATRNL1Q5VV63 1379 aa12.43□□□□□ -0.42
NEDD9-205ENST00000459670 ZNF541Q9H0D2 1346 aa12.42□□□□□ -0.42
NEDD9-205ENST00000459670 SCN4AP35499 1836 aa12.42□□□□□ -0.42
NEDD9-205ENST00000459670 K7ELQ4 463 aaPredicted RBP12.42□□□□□ -0.42
NEDD9-205ENST00000459670 NEK4P51957 841 aa12.42□□□□□ -0.42
NEDD9-205ENST00000459670 AK2P54819 239 aa12.42□□□□□ -0.42
NEDD9-205ENST00000459670 EVCP57679 992 aa12.42□□□□□ -0.42
NEDD9-205ENST00000459670 HAND2P61296 217 aa12.42□□□□□ -0.42
NEDD9-205ENST00000459670 PPARAQ07869 468 aa12.42□□□□□ -0.42
NEDD9-205ENST00000459670 IMMTQ16891 758 aaKnown RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms