RNA–Protein interactions for RNA: ENST00000458591.6

SCFD1-203, Transcript of sec1 family domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD1, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-203ENST00000458591 SLC39A14Q15043 492 aa16.38■□□□□ 0.21
SCFD1-203ENST00000458591 FOXP4Q8IVH2 680 aaPredicted RBP16.38■□□□□ 0.21
SCFD1-203ENST00000458591 PIGBQ92521 554 aa16.38■□□□□ 0.21
SCFD1-203ENST00000458591 PPP1R13BQ96KQ4 1090 aa16.38■□□□□ 0.21
SCFD1-203ENST00000458591 ANGEL1Q9UNK9 670 aaKnown RBP16.38■□□□□ 0.21
SCFD1-203ENST00000458591 TMEM232C9JQI7 657 aa16.37■□□□□ 0.21
SCFD1-203ENST00000458591 GUCY1A2P33402 732 aa16.37■□□□□ 0.21
SCFD1-203ENST00000458591 SYKP43405 635 aa16.37■□□□□ 0.21
SCFD1-203ENST00000458591 ZKSCAN3Q9BRR0 538 aa16.37■□□□□ 0.21
SCFD1-203ENST00000458591 FAM217BQ9NTX9 383 aaPredicted RBP16.37■□□□□ 0.21
SCFD1-203ENST00000458591 TMOD3Q9NYL9 352 aa16.37■□□□□ 0.21
SCFD1-203ENST00000458591 GRIN1Q05586 938 aa16.37■□□□□ 0.21
SCFD1-203ENST00000458591 TRDNQ13061 729 aa16.37■□□□□ 0.21
SCFD1-203ENST00000458591 PTPAQ15257 358 aa16.37■□□□□ 0.21
SCFD1-203ENST00000458591 NKX1-1Q15270 411 aaPredicted RBP16.37■□□□□ 0.21
SCFD1-203ENST00000458591 APOA5Q6Q788 366 aa16.37■□□□□ 0.21
SCFD1-203ENST00000458591 KIF6Q6ZMV9 814 aa16.37■□□□□ 0.21
SCFD1-203ENST00000458591 BRINP3Q76B58 766 aa16.37■□□□□ 0.21
SCFD1-203ENST00000458591 CPDO75976 1380 aa16.37■□□□□ 0.21
SCFD1-203ENST00000458591 GNL2Q13823 731 aaKnown RBP16.36■□□□□ 0.21
SCFD1-203ENST00000458591 LONRF3Q496Y0 759 aa16.36■□□□□ 0.21
SCFD1-203ENST00000458591 NFXL1Q6ZNB6 911 aa16.36■□□□□ 0.21
SCFD1-203ENST00000458591 ZMYM6O95789 1325 aa16.36■□□□□ 0.21
SCFD1-203ENST00000458591 PRKAB2O43741 272 aa16.36■□□□□ 0.21
SCFD1-203ENST00000458591 HSPA2P54652 639 aa16.36■□□□□ 0.21
SCFD1-203ENST00000458591 PDE4BQ07343 736 aa16.36■□□□□ 0.21
SCFD1-203ENST00000458591 LRRFIP1Q32MZ4 808 aaKnown RBP16.36■□□□□ 0.21
SCFD1-203ENST00000458591 CCDC102BQ68D86 513 aa16.36■□□□□ 0.21
SCFD1-203ENST00000458591 FBXO38Q6PIJ6 1188 aa16.36■□□□□ 0.21
SCFD1-203ENST00000458591 CADPS2Q86UW7 1296 aa16.36■□□□□ 0.21
SCFD1-203ENST00000458591 NLRP10Q86W26 655 aa16.36■□□□□ 0.21
SCFD1-203ENST00000458591 IGDCC4Q8TDY8 1250 aa16.36■□□□□ 0.21
SCFD1-203ENST00000458591 SLC4A9Q96Q91 983 aa16.36■□□□□ 0.21
SCFD1-203ENST00000458591 MAP3K14Q99558 947 aa16.36■□□□□ 0.21
SCFD1-203ENST00000458591 PDE6AP16499 860 aa16.35■□□□□ 0.21
SCFD1-203ENST00000458591 NTRK3Q16288 839 aa16.35■□□□□ 0.21
SCFD1-203ENST00000458591 METTL16Q86W50 562 aaKnown RBP16.35■□□□□ 0.21
SCFD1-203ENST00000458591 BPIFA3Q9BQP9 254 aa16.35■□□□□ 0.21
SCFD1-203ENST00000458591 EPB41L4AQ9HCS5 686 aaPredicted RBP16.35■□□□□ 0.21
SCFD1-203ENST00000458591 KCNJ14Q9UNX9 436 aa16.35■□□□□ 0.21
SCFD1-203ENST00000458591 TBC1D2BQ9UPU7 963 aa16.35■□□□□ 0.21
SCFD1-203ENST00000458591 SMIM22K7EJ46 135 aa16.35■□□□□ 0.21
SCFD1-203ENST00000458591 BMP6P22004 513 aa16.35■□□□□ 0.21
SCFD1-203ENST00000458591 SFPQP23246 707 aaKnown RBP eCLIP16.35■□□□□ 0.21
SCFD1-203ENST00000458591 GSDMDP57764 484 aa16.35■□□□□ 0.21
SCFD1-203ENST00000458591 VGLL2Q8N8G2 317 aa16.35■□□□□ 0.21
SCFD1-203ENST00000458591 KIF18AQ8NI77 898 aa16.35■□□□□ 0.21
SCFD1-203ENST00000458591 SLC26A6Q9BXS9 759 aa16.35■□□□□ 0.21
SCFD1-203ENST00000458591 OGFRQ9NZT2 677 aa16.35■□□□□ 0.21
SCFD1-203ENST00000458591 CGNQ9P2M7 1197 aaKnown RBP16.35■□□□□ 0.21
SCFD1-203ENST00000458591 IRS4O14654 1257 aaPredicted RBP16.34■□□□□ 0.21
SCFD1-203ENST00000458591 FANCGO15287 622 aa16.34■□□□□ 0.21
SCFD1-203ENST00000458591 KIF20AO95235 890 aa16.34■□□□□ 0.21
SCFD1-203ENST00000458591 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.34■□□□□ 0.213e-9■■□□□ 13.6
SCFD1-203ENST00000458591 ARMT1Q9H993 441 aa16.34■□□□□ 0.21
SCFD1-203ENST00000458591 LY9Q9HBG7 655 aa16.34■□□□□ 0.21
SCFD1-203ENST00000458591 FANCLQ9NW38 375 aa16.34■□□□□ 0.21
SCFD1-203ENST00000458591 ZSWIM5Q9P217 1185 aa16.34■□□□□ 0.21
SCFD1-203ENST00000458591 DDX41Q9UJV9 622 aaKnown RBP16.34■□□□□ 0.21
SCFD1-203ENST00000458591 HPSEQ9Y251 543 aa16.34■□□□□ 0.21
SCFD1-203ENST00000458591 UBN2Q6ZU65 1347 aa16.34■□□□□ 0.21
SCFD1-203ENST00000458591 STRCP1A6NGW2 1772 aa16.34■□□□□ 0.21
SCFD1-203ENST00000458591 GOLGA8AA7E2F4 631 aa16.34■□□□□ 0.21
SCFD1-203ENST00000458591 EVA1CP58658 441 aa16.34■□□□□ 0.21
SCFD1-203ENST00000458591 ERCC6LQ2NKX8 1250 aa16.34■□□□□ 0.21
SCFD1-203ENST00000458591 TMEM67Q5HYA8 995 aa16.34■□□□□ 0.21
SCFD1-203ENST00000458591 RRP12Q5JTH9 1297 aaKnown RBP16.34■□□□□ 0.21
SCFD1-203ENST00000458591 GIGYF2Q6Y7W6 1299 aaKnown RBP16.34■□□□□ 0.21
SCFD1-203ENST00000458591 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.34■□□□□ 0.21
SCFD1-203ENST00000458591 PLA2G12BQ9BX93 195 aa16.34■□□□□ 0.21
SCFD1-203ENST00000458591 ST7Q9NRC1 585 aa16.34■□□□□ 0.21
SCFD1-203ENST00000458591 TRMT112Q9UI30 125 aaKnown RBP16.34■□□□□ 0.21
SCFD1-203ENST00000458591 TCRBV5S4A2TA0A5A2 114 aa16.33■□□□□ 0.2
SCFD1-203ENST00000458591 ANKRD18BA2A2Z9 1011 aa16.33■□□□□ 0.2
SCFD1-203ENST00000458591 BTBD18B2RXH4 712 aa16.33■□□□□ 0.2
SCFD1-203ENST00000458591 ZBTB43O43298 467 aa16.33■□□□□ 0.2
SCFD1-203ENST00000458591 IARSP41252 1262 aaKnown RBP16.33■□□□□ 0.2
SCFD1-203ENST00000458591 CTSWP56202 376 aa16.33■□□□□ 0.2
SCFD1-203ENST00000458591 TRIM28Q13263 835 aaKnown RBP16.33■□□□□ 0.2
SCFD1-203ENST00000458591 TICAM2Q86XR7 235 aa16.33■□□□□ 0.2
SCFD1-203ENST00000458591 GRAMD1CQ8IYS0 662 aa16.33■□□□□ 0.2
SCFD1-203ENST00000458591 STRBPQ96SI9 672 aaKnown RBP16.33■□□□□ 0.2
SCFD1-203ENST00000458591 TMX1Q9H3N1 280 aa16.33■□□□□ 0.2
SCFD1-203ENST00000458591 IMPACTQ9P2X3 320 aa16.33■□□□□ 0.2
SCFD1-203ENST00000458591 TUBE1Q9UJT0 475 aa16.33■□□□□ 0.2
SCFD1-203ENST00000458591 MAP3K15Q6ZN16 1313 aa16.33■□□□□ 0.2
SCFD1-203ENST00000458591 TNS2Q63HR2 1409 aa16.33■□□□□ 0.2
SCFD1-203ENST00000458591 PDE8BO95263 885 aa16.33■□□□□ 0.2
SCFD1-203ENST00000458591 SERPINC1P01008 464 aa16.33■□□□□ 0.2
SCFD1-203ENST00000458591 ATP2B1P20020 1258 aa16.33■□□□□ 0.2
SCFD1-203ENST00000458591 UBASH3AP57075 661 aa16.33■□□□□ 0.2
SCFD1-203ENST00000458591 ZNF827Q17R98 1081 aa16.33■□□□□ 0.2
SCFD1-203ENST00000458591 ZBTB1Q9Y2K1 713 aa16.33■□□□□ 0.2
SCFD1-203ENST00000458591 PCDHA5Q9Y5H7 936 aa16.33■□□□□ 0.2
SCFD1-203ENST00000458591 COL5A2P05997 1499 aaPredicted RBP16.33■□□□□ 0.2
SCFD1-203ENST00000458591 SLU7O95391 586 aaKnown RBP16.32■□□□□ 0.2
SCFD1-203ENST00000458591 MAGEB6Q8N7X4 407 aa16.32■□□□□ 0.2
SCFD1-203ENST00000458591 AIDAQ96BJ3 306 aa16.32■□□□□ 0.2
SCFD1-203ENST00000458591 CHMP4CQ96CF2 233 aa16.32■□□□□ 0.2
SCFD1-203ENST00000458591 CARD10Q9BWT7 1032 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms